RNA–Protein interactions for RNA: ENST00000472603.1

RFC5-205, Transcript of replication factor C subunit 5, humanhuman

TSL 2

Gene RFC5, Length 681 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-205ENST00000472603 PKD2Q13563 968 aa19.05■□□□□ 0.64
RFC5-205ENST00000472603 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
RFC5-205ENST00000472603 ARHGEF5Q12774 1597 aa19.03■□□□□ 0.64
RFC5-205ENST00000472603 PZPP20742 1482 aa19.03■□□□□ 0.64
RFC5-205ENST00000472603 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
RFC5-205ENST00000472603 TNRQ92752 1358 aa19.01■□□□□ 0.63
RFC5-205ENST00000472603 KIF3BO15066 747 aa19■□□□□ 0.63
RFC5-205ENST00000472603 NEURL4Q96JN8 1562 aa19■□□□□ 0.63
RFC5-205ENST00000472603 UBAP1LF5GYI3 381 aa18.96■□□□□ 0.63
RFC5-205ENST00000472603 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
RFC5-205ENST00000472603 FBXO31Q5XUX0 539 aaPredicted RBP18.96■□□□□ 0.63
RFC5-205ENST00000472603 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
RFC5-205ENST00000472603 RNF17Q9BXT8 1623 aaKnown RBP18.96■□□□□ 0.63
RFC5-205ENST00000472603 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
RFC5-205ENST00000472603 WASHC2CQ9Y4E1 1318 aa18.95■□□□□ 0.62
RFC5-205ENST00000472603 MAST1Q9Y2H9 1570 aa18.94■□□□□ 0.62
RFC5-205ENST00000472603 ZC3H13Q5T200 1668 aaKnown RBP18.94■□□□□ 0.62
RFC5-205ENST00000472603 NLRP1Q9C000 1473 aa18.93■□□□□ 0.62
RFC5-205ENST00000472603 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
RFC5-205ENST00000472603 ABCC3O15438 1527 aa18.91■□□□□ 0.62
RFC5-205ENST00000472603 CPS1P31327 1500 aa18.91■□□□□ 0.62
RFC5-205ENST00000472603 UGGT1Q9NYU2 1555 aa18.91■□□□□ 0.62
RFC5-205ENST00000472603 SOCS7O14512 581 aa18.91■□□□□ 0.62
RFC5-205ENST00000472603 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
RFC5-205ENST00000472603 TSPY4P0CV99 314 aa18.9■□□□□ 0.62
RFC5-205ENST00000472603 TSPY10P0CW01 314 aa18.9■□□□□ 0.62
RFC5-205ENST00000472603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.89■□□□□ 0.61
RFC5-205ENST00000472603 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
RFC5-205ENST00000472603 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
RFC5-205ENST00000472603 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
RFC5-205ENST00000472603 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
RFC5-205ENST00000472603 CEP152O94986 1710 aa18.87■□□□□ 0.61
RFC5-205ENST00000472603 IQGAP1P46940 1657 aa18.87■□□□□ 0.61
RFC5-205ENST00000472603 MAP3K1Q13233 1512 aa18.86■□□□□ 0.61
RFC5-205ENST00000472603 MYOM3Q5VTT5 1437 aa18.86■□□□□ 0.61
RFC5-205ENST00000472603 MED14O60244 1454 aa18.85■□□□□ 0.61
RFC5-205ENST00000472603 NPHP4O75161 1426 aaPredicted RBP18.85■□□□□ 0.61
RFC5-205ENST00000472603 ANKLE2Q86XL3 938 aa18.85■□□□□ 0.61
RFC5-205ENST00000472603 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
RFC5-205ENST00000472603 THEMISQ8N1K5 641 aaPredicted RBP18.84■□□□□ 0.61
RFC5-205ENST00000472603 CROCC2H7BZ55 1655 aa18.83■□□□□ 0.61
RFC5-205ENST00000472603 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
RFC5-205ENST00000472603 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
RFC5-205ENST00000472603 DUOX2Q9NRD8 1548 aa18.82■□□□□ 0.6
RFC5-205ENST00000472603 UBR1Q8IWV7 1749 aa18.8■□□□□ 0.6
RFC5-205ENST00000472603 LOC105371045A0A1W2PR82 267 aa18.8■□□□□ 0.6
RFC5-205ENST00000472603 PIP4K2BP78356 416 aa18.8■□□□□ 0.6
RFC5-205ENST00000472603 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
RFC5-205ENST00000472603 STRCP1A6NGW2 1772 aa18.79■□□□□ 0.6
RFC5-205ENST00000472603 CFAP65Q6ZU64 1925 aaKnown RBP18.79■□□□□ 0.6
RFC5-205ENST00000472603 SYNMO15061 1565 aa18.79■□□□□ 0.6
RFC5-205ENST00000472603 MED1Q15648 1581 aaPredicted RBP18.79■□□□□ 0.6
RFC5-205ENST00000472603 TOM1O60784 492 aa18.78■□□□□ 0.6
RFC5-205ENST00000472603 ALKQ9UM73 1620 aa18.78■□□□□ 0.6
RFC5-205ENST00000472603 HSPA1LP34931 641 aa18.77■□□□□ 0.6
RFC5-205ENST00000472603 PTPN23Q9H3S7 1636 aa18.76■□□□□ 0.59
RFC5-205ENST00000472603 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
RFC5-205ENST00000472603 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
RFC5-205ENST00000472603 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
RFC5-205ENST00000472603 LRRC7Q96NW7 1537 aa18.73■□□□□ 0.59
RFC5-205ENST00000472603 ABCC5O15440 1437 aa18.73■□□□□ 0.59
RFC5-205ENST00000472603 ARHGAP31Q2M1Z3 1444 aa18.72■□□□□ 0.59
RFC5-205ENST00000472603 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
RFC5-205ENST00000472603 SLIT1O75093 1534 aa18.7■□□□□ 0.58
RFC5-205ENST00000472603 PIK3C2BO00750 1634 aa18.7■□□□□ 0.58
RFC5-205ENST00000472603 DAPK1P53355 1430 aa18.69■□□□□ 0.58
RFC5-205ENST00000472603 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
RFC5-205ENST00000472603 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
RFC5-205ENST00000472603 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
RFC5-205ENST00000472603 LTKP29376 864 aa18.64■□□□□ 0.57
RFC5-205ENST00000472603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
RFC5-205ENST00000472603 XIRP1Q702N8 1843 aaKnown RBP18.64■□□□□ 0.57
RFC5-205ENST00000472603 LMTK2Q8IWU2 1503 aa18.64■□□□□ 0.57
RFC5-205ENST00000472603 APLP2Q06481 763 aa18.63■□□□□ 0.57
RFC5-205ENST00000472603 KANK1Q14678 1352 aa18.63■□□□□ 0.57
RFC5-205ENST00000472603 TXNDC2Q86VQ3 553 aa18.62■□□□□ 0.57
RFC5-205ENST00000472603 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
RFC5-205ENST00000472603 TMEM2Q9UHN6 1383 aa18.61■□□□□ 0.57
RFC5-205ENST00000472603 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
RFC5-205ENST00000472603 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
RFC5-205ENST00000472603 EID1Q9Y6B2 187 aa18.59■□□□□ 0.57
RFC5-205ENST00000472603 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
RFC5-205ENST00000472603 ADGRB3O60242 1522 aa18.58■□□□□ 0.56
RFC5-205ENST00000472603 STAG3Q9UJ98 1225 aa18.57■□□□□ 0.56
RFC5-205ENST00000472603 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
RFC5-205ENST00000472603 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
RFC5-205ENST00000472603 NOS1P29475 1434 aa18.55■□□□□ 0.56
RFC5-205ENST00000472603 IDI1Q13907 227 aa18.53■□□□□ 0.56
RFC5-205ENST00000472603 TET3O43151 1660 aa18.53■□□□□ 0.56
RFC5-205ENST00000472603 NWD1Q149M9 1564 aa18.51■□□□□ 0.55
RFC5-205ENST00000472603 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
RFC5-205ENST00000472603 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
RFC5-205ENST00000472603 NKTRP30414 1462 aaKnown RBP18.49■□□□□ 0.55
RFC5-205ENST00000472603 RPRD2Q5VT52 1461 aaKnown RBP18.49■□□□□ 0.55
RFC5-205ENST00000472603 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
RFC5-205ENST00000472603 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
RFC5-205ENST00000472603 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
RFC5-205ENST00000472603 SLC26A8Q96RN1 970 aa18.48■□□□□ 0.55
RFC5-205ENST00000472603 FAM50AQ14320 339 aaKnown RBP18.47■□□□□ 0.55
RFC5-205ENST00000472603 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms