RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 FBXO31Q5XUX0 539 aaPredicted RBP25.68■■□□□ 1.7
SNAP47-206ENST00000470038 A2ML1A8K2U0 1454 aa25.67■■□□□ 1.7
SNAP47-206ENST00000470038 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
SNAP47-206ENST00000470038 VPS8Q8N3P4 1428 aa25.67■■□□□ 1.7
SNAP47-206ENST00000470038 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
SNAP47-206ENST00000470038 TNRQ92752 1358 aa25.66■■□□□ 1.7
SNAP47-206ENST00000470038 KDM5DQ9BY66 1539 aa25.64■■□□□ 1.7
SNAP47-206ENST00000470038 LRRC9Q6ZRR7 1453 aa25.64■■□□□ 1.69
SNAP47-206ENST00000470038 ARHGEF5Q12774 1597 aa25.63■■□□□ 1.69
SNAP47-206ENST00000470038 DNMT1P26358 1616 aaKnown RBP25.62■■□□□ 1.69
SNAP47-206ENST00000470038 PZPP20742 1482 aa25.61■■□□□ 1.69
SNAP47-206ENST00000470038 FAM135AQ9P2D6 1515 aa25.6■■□□□ 1.69
SNAP47-206ENST00000470038 UBAP1LF5GYI3 381 aa25.6■■□□□ 1.69
SNAP47-206ENST00000470038 KANK4Q5T7N3 995 aaPredicted RBP25.59■■□□□ 1.69
SNAP47-206ENST00000470038 MIA2Q96PC5 1412 aa25.54■■□□□ 1.68
SNAP47-206ENST00000470038 ILDR2Q71H61 639 aa25.53■■□□□ 1.68
SNAP47-206ENST00000470038 ANKLE2Q86XL3 938 aa25.53■■□□□ 1.68
SNAP47-206ENST00000470038 THEMISQ8N1K5 641 aaPredicted RBP25.53■■□□□ 1.68
SNAP47-206ENST00000470038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.52■■□□□ 1.68
SNAP47-206ENST00000470038 MYOM3Q5VTT5 1437 aa25.51■■□□□ 1.67
SNAP47-206ENST00000470038 MAP3K1Q13233 1512 aa25.51■■□□□ 1.67
SNAP47-206ENST00000470038 MAST1Q9Y2H9 1570 aa25.5■■□□□ 1.67
SNAP47-206ENST00000470038 NLRP1Q9C000 1473 aa25.49■■□□□ 1.67
SNAP47-206ENST00000470038 POLR1AO95602 1720 aaPredicted RBP25.48■■□□□ 1.67
SNAP47-206ENST00000470038 SPATA31D1Q6ZQQ2 1576 aa25.48■■□□□ 1.67
SNAP47-206ENST00000470038 UGGT1Q9NYU2 1555 aa25.48■■□□□ 1.67
SNAP47-206ENST00000470038 NEURL4Q96JN8 1562 aa25.47■■□□□ 1.67
SNAP47-206ENST00000470038 RNF17Q9BXT8 1623 aaKnown RBP25.46■■□□□ 1.67
SNAP47-206ENST00000470038 APLP2Q06481 763 aa25.45■■□□□ 1.66
SNAP47-206ENST00000470038 ABCC3O15438 1527 aa25.45■■□□□ 1.66
SNAP47-206ENST00000470038 SCAF1Q9H7N4 1312 aaKnown RBP25.43■■□□□ 1.66
SNAP47-206ENST00000470038 SHANK2Q9UPX8 1470 aa25.43■■□□□ 1.66
SNAP47-206ENST00000470038 EIF2AK4Q9P2K8 1649 aaKnown RBP25.42■■□□□ 1.66
SNAP47-206ENST00000470038 NPHP4O75161 1426 aaPredicted RBP25.41■■□□□ 1.66
SNAP47-206ENST00000470038 ZC3H13Q5T200 1668 aaKnown RBP25.41■■□□□ 1.66
SNAP47-206ENST00000470038 CPS1P31327 1500 aa25.41■■□□□ 1.66
SNAP47-206ENST00000470038 PIP4K2BP78356 416 aa25.4■■□□□ 1.66
SNAP47-206ENST00000470038 DUOX2Q9NRD8 1548 aa25.39■■□□□ 1.66
SNAP47-206ENST00000470038 ERVK-7P63135 1459 aa25.39■■□□□ 1.65
SNAP47-206ENST00000470038 SOCS7O14512 581 aa25.38■■□□□ 1.65
SNAP47-206ENST00000470038 TOM1O60784 492 aa25.38■■□□□ 1.65
SNAP47-206ENST00000470038 RRP7BPQ9NSQ0 103 aa25.38■■□□□ 1.65
SNAP47-206ENST00000470038 MED14O60244 1454 aa25.37■■□□□ 1.65
SNAP47-206ENST00000470038 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
SNAP47-206ENST00000470038 MROH1Q8NDA8 1641 aa25.37■■□□□ 1.65
SNAP47-206ENST00000470038 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
SNAP47-206ENST00000470038 ABCC5O15440 1437 aa25.35■■□□□ 1.65
SNAP47-206ENST00000470038 CFAP65Q6ZU64 1925 aaKnown RBP25.35■■□□□ 1.65
SNAP47-206ENST00000470038 VWDEQ8N2E2 1590 aa25.35■■□□□ 1.65
SNAP47-206ENST00000470038 CEP152O94986 1710 aa25.34■■□□□ 1.65
SNAP47-206ENST00000470038 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.33■■□□□ 1.65
SNAP47-206ENST00000470038 HSPA1LP34931 641 aa25.32■■□□□ 1.64
SNAP47-206ENST00000470038 PTPN23Q9H3S7 1636 aa25.32■■□□□ 1.64
SNAP47-206ENST00000470038 IQGAP1P46940 1657 aa25.31■■□□□ 1.64
SNAP47-206ENST00000470038 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
SNAP47-206ENST00000470038 DAPK1P53355 1430 aa25.29■■□□□ 1.64
SNAP47-206ENST00000470038 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
SNAP47-206ENST00000470038 CROCC2H7BZ55 1655 aa25.27■■□□□ 1.64
SNAP47-206ENST00000470038 FGD6Q6ZV73 1430 aa25.27■■□□□ 1.64
SNAP47-206ENST00000470038 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
SNAP47-206ENST00000470038 ARHGAP31Q2M1Z3 1444 aa25.26■■□□□ 1.63
SNAP47-206ENST00000470038 KANK1Q14678 1352 aa25.25■■□□□ 1.63
SNAP47-206ENST00000470038 UBR1Q8IWV7 1749 aa25.24■■□□□ 1.63
SNAP47-206ENST00000470038 TXNDC2Q86VQ3 553 aa25.24■■□□□ 1.63
SNAP47-206ENST00000470038 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
SNAP47-206ENST00000470038 LTKP29376 864 aa25.23■■□□□ 1.63
SNAP47-206ENST00000470038 ANKRD30AQ9BXX3 1397 aa25.22■■□□□ 1.63
SNAP47-206ENST00000470038 STAG3Q9UJ98 1225 aa25.21■■□□□ 1.63
SNAP47-206ENST00000470038 EID1Q9Y6B2 187 aa25.21■■□□□ 1.63
SNAP47-206ENST00000470038 LRRC7Q96NW7 1537 aa25.2■■□□□ 1.62
SNAP47-206ENST00000470038 STRCP1A6NGW2 1772 aa25.19■■□□□ 1.62
SNAP47-206ENST00000470038 ARHGAP23Q9P227 1491 aa25.18■■□□□ 1.62
SNAP47-206ENST00000470038 SLIT1O75093 1534 aa25.17■■□□□ 1.62
SNAP47-206ENST00000470038 SENP3Q9H4L4 574 aaPredicted RBP25.17■■□□□ 1.62
SNAP47-206ENST00000470038 ALKQ9UM73 1620 aa25.15■■□□□ 1.62
SNAP47-206ENST00000470038 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.62
SNAP47-206ENST00000470038 PIK3C2BO00750 1634 aa25.14■■□□□ 1.61
SNAP47-206ENST00000470038 SYNMO15061 1565 aa25.14■■□□□ 1.61
SNAP47-206ENST00000470038 IDI1Q13907 227 aa25.13■■□□□ 1.61
SNAP47-206ENST00000470038 TMEM2Q9UHN6 1383 aa25.13■■□□□ 1.61
SNAP47-206ENST00000470038 MED1Q15648 1581 aaPredicted RBP25.12■■□□□ 1.61
SNAP47-206ENST00000470038 LMTK2Q8IWU2 1503 aa25.11■■□□□ 1.61
SNAP47-206ENST00000470038 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
SNAP47-206ENST00000470038 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
SNAP47-206ENST00000470038 ADGRL2O95490 1459 aa25.06■■□□□ 1.6
SNAP47-206ENST00000470038 NOS1P29475 1434 aa25.03■■□□□ 1.6
SNAP47-206ENST00000470038 SLC26A8Q96RN1 970 aa25.03■■□□□ 1.6
SNAP47-206ENST00000470038 ANKRD50Q9ULJ7 1429 aa25.03■■□□□ 1.6
SNAP47-206ENST00000470038 SLC52A1Q9NWF4 448 aa25.02■■□□□ 1.6
SNAP47-206ENST00000470038 KDM5AP29375 1690 aaKnown RBP25.01■■□□□ 1.59
SNAP47-206ENST00000470038 BCANQ96GW7 911 aa25.01■■□□□ 1.59
SNAP47-206ENST00000470038 KCNA6P17658 529 aa24.99■■□□□ 1.59
SNAP47-206ENST00000470038 ADGRB3O60242 1522 aa24.98■■□□□ 1.59
SNAP47-206ENST00000470038 TMEM94Q12767 1356 aa24.97■■□□□ 1.59
SNAP47-206ENST00000470038 PROSER2Q86WR7 435 aaPredicted RBP24.97■■□□□ 1.59
SNAP47-206ENST00000470038 XIRP1Q702N8 1843 aaKnown RBP24.97■■□□□ 1.59
SNAP47-206ENST00000470038 RBM33Q96EV2 1170 aaKnown RBP24.95■■□□□ 1.58
SNAP47-206ENST00000470038 RPRD2Q5VT52 1461 aaKnown RBP24.95■■□□□ 1.58
SNAP47-206ENST00000470038 TET3O43151 1660 aa24.94■■□□□ 1.58
SNAP47-206ENST00000470038 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms