RNA–Protein interactions for RNA: ENST00000470038.1

SNAP47-206, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-206ENST00000470038 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
SNAP47-206ENST00000470038 ABCC9O60706 1549 aa36.5■■■■□ 3.43
SNAP47-206ENST00000470038 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
SNAP47-206ENST00000470038 RB1CC1Q8TDY2 1594 aa34.66■■■■□ 3.14
SNAP47-206ENST00000470038 DCAF8L2P0C7V8 631 aa34.4■■■■□ 3.1
SNAP47-206ENST00000470038 NACADO15069 1562 aa34.4■■■■□ 3.1
SNAP47-206ENST00000470038 DNAJC5BQ9UF47 199 aa34.31■■■■□ 3.08
SNAP47-206ENST00000470038 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
SNAP47-206ENST00000470038 MYO15BQ96JP2 1530 aa33.87■■■■□ 3.01
SNAP47-206ENST00000470038 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3
SNAP47-206ENST00000470038 BICRAQ9NZM4 1560 aa33.63■■■□□ 2.97
SNAP47-206ENST00000470038 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
SNAP47-206ENST00000470038 DCAF1Q9Y4B6 1507 aa33.41■■■□□ 2.94
SNAP47-206ENST00000470038 SCRIBQ14160 1630 aa33.17■■■□□ 2.9
SNAP47-206ENST00000470038 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
SNAP47-206ENST00000470038 CC2D2AQ9P2K1 1620 aa32.92■■■□□ 2.86
SNAP47-206ENST00000470038 CECR2Q9BXF3 1484 aa32.87■■■□□ 2.85
SNAP47-206ENST00000470038 EIF4G1Q04637 1599 aaKnown RBP32.83■■■□□ 2.85
SNAP47-206ENST00000470038 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
SNAP47-206ENST00000470038 ATAD2BQ9ULI0 1458 aa31.67■■■□□ 2.66
SNAP47-206ENST00000470038 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
SNAP47-206ENST00000470038 SMARCA2P51531 1590 aa31.57■■■□□ 2.64
SNAP47-206ENST00000470038 DNAJC5Q9H3Z4 198 aa31.56■■■□□ 2.64
SNAP47-206ENST00000470038 ERCC6Q03468 1493 aa31.54■■■□□ 2.64
SNAP47-206ENST00000470038 HMGXB3Q12766 1538 aa31.5■■■□□ 2.63
SNAP47-206ENST00000470038 BAZ1AQ9NRL2 1556 aaPredicted RBP31.45■■■□□ 2.63
SNAP47-206ENST00000470038 CUX2O14529 1486 aa31.45■■■□□ 2.62
SNAP47-206ENST00000470038 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
SNAP47-206ENST00000470038 NESP48681 1621 aa31.32■■■□□ 2.6
SNAP47-206ENST00000470038 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
SNAP47-206ENST00000470038 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
SNAP47-206ENST00000470038 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
SNAP47-206ENST00000470038 THOC2Q8NI27 1593 aaKnown RBP30.96■■■□□ 2.55
SNAP47-206ENST00000470038 PDS5BQ9NTI5 1447 aa30.93■■■□□ 2.54
SNAP47-206ENST00000470038 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
SNAP47-206ENST00000470038 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
SNAP47-206ENST00000470038 WIZO95785 1651 aa30.84■■■□□ 2.53
SNAP47-206ENST00000470038 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
SNAP47-206ENST00000470038 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
SNAP47-206ENST00000470038 WDR62O43379 1518 aa30.53■■■□□ 2.48
SNAP47-206ENST00000470038 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
SNAP47-206ENST00000470038 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
SNAP47-206ENST00000470038 CFTRP13569 1480 aa30.44■■■□□ 2.46
SNAP47-206ENST00000470038 TOP2AP11388 1531 aaKnown RBP30.43■■■□□ 2.46
SNAP47-206ENST00000470038 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
SNAP47-206ENST00000470038 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
SNAP47-206ENST00000470038 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
SNAP47-206ENST00000470038 OSCARQ8IYS5 282 aa30.08■■■□□ 2.41
SNAP47-206ENST00000470038 PRDM2Q13029 1718 aa30.05■■■□□ 2.4
SNAP47-206ENST00000470038 IFT140Q96RY7 1462 aa29.91■■■□□ 2.38
SNAP47-206ENST00000470038 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
SNAP47-206ENST00000470038 ZNF608Q9ULD9 1512 aaPredicted RBP29.87■■■□□ 2.37
SNAP47-206ENST00000470038 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
SNAP47-206ENST00000470038 DNMBPQ6XZF7 1577 aa29.75■■■□□ 2.35
SNAP47-206ENST00000470038 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
SNAP47-206ENST00000470038 AQRO60306 1485 aaKnown RBP eCLIP29.62■■■□□ 2.33
SNAP47-206ENST00000470038 RIMBP3CA6NJZ7 1639 aa29.61■■■□□ 2.33
SNAP47-206ENST00000470038 RIMBP3BA6NNM3 1639 aa29.61■■■□□ 2.33
SNAP47-206ENST00000470038 RIMBP3Q9UFD9 1639 aa29.61■■■□□ 2.33
SNAP47-206ENST00000470038 TARBP1Q13395 1621 aaKnown RBP29.59■■■□□ 2.33
SNAP47-206ENST00000470038 POLA1P09884 1462 aaPredicted RBP29.57■■■□□ 2.32
SNAP47-206ENST00000470038 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
SNAP47-206ENST00000470038 FBLN2P98095 1184 aa29.52■■■□□ 2.32
SNAP47-206ENST00000470038 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
SNAP47-206ENST00000470038 SOGA1O94964 1423 aa29.48■■■□□ 2.31
SNAP47-206ENST00000470038 CHD1O14646 1710 aa29.45■■■□□ 2.31
SNAP47-206ENST00000470038 TDRD9Q8NDG6 1382 aaKnown RBP29.45■■■□□ 2.31
SNAP47-206ENST00000470038 CYB5RLQ6IPT4 315 aa29.41■■■□□ 2.3
SNAP47-206ENST00000470038 FGD5Q6ZNL6 1462 aa29.39■■■□□ 2.3
SNAP47-206ENST00000470038 CUX1P39880 1505 aa29.34■■■□□ 2.29
SNAP47-206ENST00000470038 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
SNAP47-206ENST00000470038 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
SNAP47-206ENST00000470038 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
SNAP47-206ENST00000470038 WDR97A6NE52 1622 aa29.26■■■□□ 2.27
SNAP47-206ENST00000470038 ARAP1Q96P48 1450 aa29.23■■■□□ 2.27
SNAP47-206ENST00000470038 GRIN2BQ13224 1484 aa29.21■■■□□ 2.27
SNAP47-206ENST00000470038 MAGI1Q96QZ7 1491 aaPredicted RBP29.2■■■□□ 2.26
SNAP47-206ENST00000470038 TRHP20396 242 aaPredicted RBP29.13■■■□□ 2.25
SNAP47-206ENST00000470038 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
SNAP47-206ENST00000470038 CLASP1Q7Z460 1538 aa29.11■■■□□ 2.25
SNAP47-206ENST00000470038 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
SNAP47-206ENST00000470038 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
SNAP47-206ENST00000470038 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
SNAP47-206ENST00000470038 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
SNAP47-206ENST00000470038 ABCA5Q8WWZ7 1642 aa28.97■■■□□ 2.23
SNAP47-206ENST00000470038 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
SNAP47-206ENST00000470038 TOP2BQ02880 1626 aa28.83■■■□□ 2.21
SNAP47-206ENST00000470038 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
SNAP47-206ENST00000470038 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
SNAP47-206ENST00000470038 ADAMTS12P58397 1594 aa28.77■■■□□ 2.2
SNAP47-206ENST00000470038 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
SNAP47-206ENST00000470038 NUP160Q12769 1436 aa28.71■■■□□ 2.19
SNAP47-206ENST00000470038 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
SNAP47-206ENST00000470038 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
SNAP47-206ENST00000470038 ERICH3Q5RHP9 1530 aa28.66■■■□□ 2.18
SNAP47-206ENST00000470038 SHROOM2Q13796 1616 aa28.55■■■□□ 2.16
SNAP47-206ENST00000470038 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
SNAP47-206ENST00000470038 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
SNAP47-206ENST00000470038 RUSC2Q8N2Y8 1516 aa28.35■■■□□ 2.13
SNAP47-206ENST00000470038 AEBP2Q6ZN18 517 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms