RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 PKD2Q13563 968 aa23.27■■□□□ 1.32
SDCCAG3-209ENST00000468963 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
SDCCAG3-209ENST00000468963 APLP2Q06481 763 aa23.26■■□□□ 1.31
SDCCAG3-209ENST00000468963 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
SDCCAG3-209ENST00000468963 CEP170BQ9Y4F5 1589 aaPredicted RBP23.26■■□□□ 1.31
SDCCAG3-209ENST00000468963 PLA2R1Q13018 1463 aa23.25■■□□□ 1.31
SDCCAG3-209ENST00000468963 FAM135AQ9P2D6 1515 aa23.25■■□□□ 1.31
SDCCAG3-209ENST00000468963 LTBP4Q8N2S1 1624 aa23.25■■□□□ 1.31
SDCCAG3-209ENST00000468963 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
SDCCAG3-209ENST00000468963 A2ML1A8K2U0 1454 aa23.24■■□□□ 1.31
SDCCAG3-209ENST00000468963 PZPP20742 1482 aa23.24■■□□□ 1.31
SDCCAG3-209ENST00000468963 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
SDCCAG3-209ENST00000468963 TNRQ92752 1358 aa23.23■■□□□ 1.31
SDCCAG3-209ENST00000468963 TCOF1Q13428 1488 aaKnown RBP23.23■■□□□ 1.31
SDCCAG3-209ENST00000468963 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
SDCCAG3-209ENST00000468963 ABCC5O15440 1437 aa23.17■■□□□ 1.3
SDCCAG3-209ENST00000468963 ZNF335Q9H4Z2 1342 aaPredicted RBP23.16■■□□□ 1.3
SDCCAG3-209ENST00000468963 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
SDCCAG3-209ENST00000468963 THEMISQ8N1K5 641 aaPredicted RBP23.13■■□□□ 1.29
SDCCAG3-209ENST00000468963 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
SDCCAG3-209ENST00000468963 ABCC3O15438 1527 aa23.13■■□□□ 1.29
SDCCAG3-209ENST00000468963 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
SDCCAG3-209ENST00000468963 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
SDCCAG3-209ENST00000468963 PTPN23Q9H3S7 1636 aa23.12■■□□□ 1.29
SDCCAG3-209ENST00000468963 EIF2AK4Q9P2K8 1649 aaKnown RBP23.12■■□□□ 1.29
SDCCAG3-209ENST00000468963 FGD6Q6ZV73 1430 aa23.11■■□□□ 1.29
SDCCAG3-209ENST00000468963 KIF15Q9NS87 1388 aa23.11■■□□□ 1.29
SDCCAG3-209ENST00000468963 NLRP1Q9C000 1473 aa23.11■■□□□ 1.29
SDCCAG3-209ENST00000468963 ANKLE2Q86XL3 938 aa23.1■■□□□ 1.29
SDCCAG3-209ENST00000468963 MROH1Q8NDA8 1641 aa23.1■■□□□ 1.29
SDCCAG3-209ENST00000468963 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
SDCCAG3-209ENST00000468963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.29
SDCCAG3-209ENST00000468963 DAPK1P53355 1430 aa23.08■■□□□ 1.29
SDCCAG3-209ENST00000468963 ZC3H13Q5T200 1668 aaKnown RBP23.06■■□□□ 1.28
SDCCAG3-209ENST00000468963 SPATA31D1Q6ZQQ2 1576 aa23.06■■□□□ 1.28
SDCCAG3-209ENST00000468963 CHIC2Q9UKJ5 165 aa23.05■■□□□ 1.28
SDCCAG3-209ENST00000468963 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
SDCCAG3-209ENST00000468963 UGGT1Q9NYU2 1555 aa23.05■■□□□ 1.28
SDCCAG3-209ENST00000468963 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
SDCCAG3-209ENST00000468963 NEURL4Q96JN8 1562 aa23.03■■□□□ 1.28
SDCCAG3-209ENST00000468963 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
SDCCAG3-209ENST00000468963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.283e-7■■□□□ 12.6
SDCCAG3-209ENST00000468963 CFAP65Q6ZU64 1925 aaKnown RBP23.02■■□□□ 1.28
SDCCAG3-209ENST00000468963 ARHGAP31Q2M1Z3 1444 aa23.01■■□□□ 1.27
SDCCAG3-209ENST00000468963 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
SDCCAG3-209ENST00000468963 CEP152O94986 1710 aa22.99■■□□□ 1.27
SDCCAG3-209ENST00000468963 MED14O60244 1454 aa22.99■■□□□ 1.27
SDCCAG3-209ENST00000468963 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
SDCCAG3-209ENST00000468963 UBAP1LF5GYI3 381 aa22.98■■□□□ 1.27
SDCCAG3-209ENST00000468963 PRDM15P57071 1507 aaPredicted RBP22.98■■□□□ 1.27
SDCCAG3-209ENST00000468963 NPHP4O75161 1426 aaPredicted RBP22.97■■□□□ 1.27
SDCCAG3-209ENST00000468963 DEPDC5O75140 1603 aa22.96■■□□□ 1.27
SDCCAG3-209ENST00000468963 FAM50AQ14320 339 aaKnown RBP22.95■■□□□ 1.26
SDCCAG3-209ENST00000468963 KANK1Q14678 1352 aa22.94■■□□□ 1.26
SDCCAG3-209ENST00000468963 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
SDCCAG3-209ENST00000468963 VWDEQ8N2E2 1590 aa22.91■■□□□ 1.26
SDCCAG3-209ENST00000468963 CPS1P31327 1500 aa22.91■■□□□ 1.26
SDCCAG3-209ENST00000468963 LTKP29376 864 aa22.9■■□□□ 1.26
SDCCAG3-209ENST00000468963 LMTK2Q8IWU2 1503 aa22.9■■□□□ 1.26
SDCCAG3-209ENST00000468963 UBR1Q8IWV7 1749 aa22.89■■□□□ 1.26
SDCCAG3-209ENST00000468963 IDI1Q13907 227 aa22.88■■□□□ 1.25
SDCCAG3-209ENST00000468963 TXNDC2Q86VQ3 553 aa22.88■■□□□ 1.25
SDCCAG3-209ENST00000468963 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
SDCCAG3-209ENST00000468963 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
SDCCAG3-209ENST00000468963 TOM1O60784 492 aa22.85■■□□□ 1.25
SDCCAG3-209ENST00000468963 SLIT1O75093 1534 aa22.85■■□□□ 1.25
SDCCAG3-209ENST00000468963 DISP3Q9P2K9 1392 aa22.85■■□□□ 1.25
SDCCAG3-209ENST00000468963 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
SDCCAG3-209ENST00000468963 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
SDCCAG3-209ENST00000468963 NOS1P29475 1434 aa22.82■■□□□ 1.24
SDCCAG3-209ENST00000468963 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
SDCCAG3-209ENST00000468963 TMEM2Q9UHN6 1383 aa22.81■■□□□ 1.24
SDCCAG3-209ENST00000468963 STAG3Q9UJ98 1225 aa22.81■■□□□ 1.24
SDCCAG3-209ENST00000468963 PIK3C2BO00750 1634 aa22.79■■□□□ 1.24
SDCCAG3-209ENST00000468963 PIP4K2BP78356 416 aa22.79■■□□□ 1.24
SDCCAG3-209ENST00000468963 SLC52A1Q9NWF4 448 aa22.79■■□□□ 1.24
SDCCAG3-209ENST00000468963 STRCP1A6NGW2 1772 aa22.78■■□□□ 1.24
SDCCAG3-209ENST00000468963 ILDR2Q71H61 639 aa22.78■■□□□ 1.24
SDCCAG3-209ENST00000468963 EFCAB6Q5THR3 1501 aa22.77■■□□□ 1.24
SDCCAG3-209ENST00000468963 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
SDCCAG3-209ENST00000468963 SYNMO15061 1565 aa22.76■■□□□ 1.23
SDCCAG3-209ENST00000468963 HSPA1LP34931 641 aa22.76■■□□□ 1.23
SDCCAG3-209ENST00000468963 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
SDCCAG3-209ENST00000468963 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
SDCCAG3-209ENST00000468963 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
SDCCAG3-209ENST00000468963 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
SDCCAG3-209ENST00000468963 RPRD2Q5VT52 1461 aaKnown RBP22.73■■□□□ 1.23
SDCCAG3-209ENST00000468963 ALKQ9UM73 1620 aa22.72■■□□□ 1.23
SDCCAG3-209ENST00000468963 ITGAEP38570 1179 aa22.68■■□□□ 1.22
SDCCAG3-209ENST00000468963 TET3O43151 1660 aa22.68■■□□□ 1.22
SDCCAG3-209ENST00000468963 KCNA6P17658 529 aa22.67■■□□□ 1.22
SDCCAG3-209ENST00000468963 SLC26A8Q96RN1 970 aa22.67■■□□□ 1.22
SDCCAG3-209ENST00000468963 UNC13BO14795 1591 aa22.66■■□□□ 1.22
SDCCAG3-209ENST00000468963 ADGRB3O60242 1522 aa22.66■■□□□ 1.22
SDCCAG3-209ENST00000468963 NUP155O75694 1391 aa22.63■■□□□ 1.21
SDCCAG3-209ENST00000468963 ZFYVE9O95405 1425 aa22.61■■□□□ 1.21
SDCCAG3-209ENST00000468963 HDGFP51858 240 aaKnown RBP22.61■■□□□ 1.21
SDCCAG3-209ENST00000468963 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
SDCCAG3-209ENST00000468963 SOCS7O14512 581 aa22.6■■□□□ 1.21
SDCCAG3-209ENST00000468963 XIRP1Q702N8 1843 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms