RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 EHBP1L1Q8N3D4 1523 aa19.84■□□□□ 0.77
UBR4-211ENST00000467272 PZPP20742 1482 aa19.82■□□□□ 0.76
UBR4-211ENST00000467272 FBXO31Q5XUX0 539 aaPredicted RBP19.81■□□□□ 0.76
UBR4-211ENST00000467272 TNRQ92752 1358 aa19.79■□□□□ 0.76
UBR4-211ENST00000467272 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
UBR4-211ENST00000467272 CCDC141Q6ZP82 1450 aa19.78■□□□□ 0.76
UBR4-211ENST00000467272 CPS1P31327 1500 aa19.77■□□□□ 0.76
UBR4-211ENST00000467272 MED14O60244 1454 aa19.76■□□□□ 0.75
UBR4-211ENST00000467272 SHANK2Q9UPX8 1470 aa19.76■□□□□ 0.75
UBR4-211ENST00000467272 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
UBR4-211ENST00000467272 VWDEQ8N2E2 1590 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 CAMSAP2Q08AD1 1489 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 NCOA2Q15596 1464 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 KIF3BO15066 747 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 ALKQ9UM73 1620 aa19.75■□□□□ 0.75
UBR4-211ENST00000467272 NLRP1Q9C000 1473 aa19.73■□□□□ 0.75
UBR4-211ENST00000467272 POLR1AO95602 1720 aaPredicted RBP19.73■□□□□ 0.75
UBR4-211ENST00000467272 HSPA1LP34931 641 aa19.72■□□□□ 0.75
UBR4-211ENST00000467272 ARHGEF5Q12774 1597 aa19.72■□□□□ 0.75
UBR4-211ENST00000467272 DEPDC5O75140 1603 aa19.71■□□□□ 0.75
UBR4-211ENST00000467272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
UBR4-211ENST00000467272 WASHC2CQ9Y4E1 1318 aa19.7■□□□□ 0.74
UBR4-211ENST00000467272 ANKLE2Q86XL3 938 aa19.69■□□□□ 0.74
UBR4-211ENST00000467272 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
UBR4-211ENST00000467272 MED1Q15648 1581 aaPredicted RBP19.67■□□□□ 0.74
UBR4-211ENST00000467272 UGGT1Q9NYU2 1555 aa19.67■□□□□ 0.74
UBR4-211ENST00000467272 RNF17Q9BXT8 1623 aaKnown RBP19.67■□□□□ 0.74
UBR4-211ENST00000467272 NPHP4O75161 1426 aaPredicted RBP19.67■□□□□ 0.74
UBR4-211ENST00000467272 TOM1O60784 492 aa19.66■□□□□ 0.74
UBR4-211ENST00000467272 ABCC3O15438 1527 aa19.66■□□□□ 0.74
UBR4-211ENST00000467272 MAST1Q9Y2H9 1570 aa19.65■□□□□ 0.74
UBR4-211ENST00000467272 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
UBR4-211ENST00000467272 PIP4K2BP78356 416 aa19.61■□□□□ 0.73
UBR4-211ENST00000467272 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
UBR4-211ENST00000467272 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
UBR4-211ENST00000467272 TSPY4P0CV99 314 aa19.6■□□□□ 0.73
UBR4-211ENST00000467272 TSPY10P0CW01 314 aa19.6■□□□□ 0.73
UBR4-211ENST00000467272 LRRC9Q6ZRR7 1453 aa19.6■□□□□ 0.73
UBR4-211ENST00000467272 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
UBR4-211ENST00000467272 IQGAP1P46940 1657 aa19.59■□□□□ 0.73
UBR4-211ENST00000467272 ZC3H13Q5T200 1668 aaKnown RBP19.59■□□□□ 0.73
UBR4-211ENST00000467272 EIF2AK4Q9P2K8 1649 aaKnown RBP19.58■□□□□ 0.73
UBR4-211ENST00000467272 ARHGAP23Q9P227 1491 aa19.56■□□□□ 0.72
UBR4-211ENST00000467272 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
UBR4-211ENST00000467272 ARHGAP31Q2M1Z3 1444 aa19.54■□□□□ 0.72
UBR4-211ENST00000467272 MAP3K1Q13233 1512 aa19.54■□□□□ 0.72
UBR4-211ENST00000467272 SYNMO15061 1565 aa19.53■□□□□ 0.72
UBR4-211ENST00000467272 VPS8Q8N3P4 1428 aa19.53■□□□□ 0.72
UBR4-211ENST00000467272 SLIT1O75093 1534 aa19.53■□□□□ 0.72
UBR4-211ENST00000467272 UBR1Q8IWV7 1749 aa19.52■□□□□ 0.72
UBR4-211ENST00000467272 KANK4Q5T7N3 995 aaPredicted RBP19.51■□□□□ 0.71
UBR4-211ENST00000467272 MYOM3Q5VTT5 1437 aa19.51■□□□□ 0.71
UBR4-211ENST00000467272 SCAF11Q99590 1463 aaKnown RBP19.5■□□□□ 0.71
UBR4-211ENST00000467272 LTKP29376 864 aa19.5■□□□□ 0.71
UBR4-211ENST00000467272 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
UBR4-211ENST00000467272 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
UBR4-211ENST00000467272 CEP152O94986 1710 aa19.45■□□□□ 0.7
UBR4-211ENST00000467272 ABCC5O15440 1437 aa19.44■□□□□ 0.7
UBR4-211ENST00000467272 ERBINQ96RT1 1412 aa19.44■□□□□ 0.7
UBR4-211ENST00000467272 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
UBR4-211ENST00000467272 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
UBR4-211ENST00000467272 TMEM2Q9UHN6 1383 aa19.42■□□□□ 0.7
UBR4-211ENST00000467272 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
UBR4-211ENST00000467272 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
UBR4-211ENST00000467272 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
UBR4-211ENST00000467272 FAM135BQ49AJ0 1406 aa19.4■□□□□ 0.7
UBR4-211ENST00000467272 TET3O43151 1660 aa19.39■□□□□ 0.69
UBR4-211ENST00000467272 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
UBR4-211ENST00000467272 KDM5AP29375 1690 aaKnown RBP19.38■□□□□ 0.69
UBR4-211ENST00000467272 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
UBR4-211ENST00000467272 CROCC2H7BZ55 1655 aa19.36■□□□□ 0.69
UBR4-211ENST00000467272 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
UBR4-211ENST00000467272 NOS1P29475 1434 aa19.34■□□□□ 0.69
UBR4-211ENST00000467272 DAPK1P53355 1430 aa19.34■□□□□ 0.69
UBR4-211ENST00000467272 IDI1Q13907 227 aa19.34■□□□□ 0.69
UBR4-211ENST00000467272 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
UBR4-211ENST00000467272 EID1Q9Y6B2 187 aa19.33■□□□□ 0.68
UBR4-211ENST00000467272 EFCAB6Q5THR3 1501 aa19.33■□□□□ 0.68
UBR4-211ENST00000467272 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
UBR4-211ENST00000467272 KCNA6P17658 529 aa19.32■□□□□ 0.68
UBR4-211ENST00000467272 PTPN23Q9H3S7 1636 aa19.32■□□□□ 0.68
UBR4-211ENST00000467272 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
UBR4-211ENST00000467272 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
UBR4-211ENST00000467272 NWD1Q149M9 1564 aa19.29■□□□□ 0.68
UBR4-211ENST00000467272 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
UBR4-211ENST00000467272 KANK1Q14678 1352 aa19.27■□□□□ 0.68
UBR4-211ENST00000467272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.679e-7■□□□□ 10.3
UBR4-211ENST00000467272 NKTRP30414 1462 aaKnown RBP19.26■□□□□ 0.67
UBR4-211ENST00000467272 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
UBR4-211ENST00000467272 ADGRL2O95490 1459 aa19.25■□□□□ 0.67
UBR4-211ENST00000467272 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
UBR4-211ENST00000467272 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
UBR4-211ENST00000467272 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
UBR4-211ENST00000467272 SLC26A8Q96RN1 970 aa19.24■□□□□ 0.67
UBR4-211ENST00000467272 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
UBR4-211ENST00000467272 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
UBR4-211ENST00000467272 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
UBR4-211ENST00000467272 PROSER2Q86WR7 435 aaPredicted RBP19.21■□□□□ 0.67
UBR4-211ENST00000467272 STAG3Q9UJ98 1225 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms