RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 KIF3BO15066 747 aa20.27■□□□□ 0.84
SRM-203ENST00000465788 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
SRM-203ENST00000465788 LTBP4Q8N2S1 1624 aa20.24■□□□□ 0.83
SRM-203ENST00000465788 MIA2Q96PC5 1412 aa20.24■□□□□ 0.83
SRM-203ENST00000465788 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
SRM-203ENST00000465788 PZPP20742 1482 aa20.23■□□□□ 0.83
SRM-203ENST00000465788 TCOF1Q13428 1488 aaKnown RBP20.23■□□□□ 0.83
SRM-203ENST00000465788 LOC105371045A0A1W2PR82 267 aa20.22■□□□□ 0.83
SRM-203ENST00000465788 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
SRM-203ENST00000465788 TNRQ92752 1358 aa20.21■□□□□ 0.83
SRM-203ENST00000465788 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
SRM-203ENST00000465788 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
SRM-203ENST00000465788 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
SRM-203ENST00000465788 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
SRM-203ENST00000465788 RNF17Q9BXT8 1623 aaKnown RBP20.18■□□□□ 0.82
SRM-203ENST00000465788 ZC3H13Q5T200 1668 aaKnown RBP20.18■□□□□ 0.82
SRM-203ENST00000465788 APLP2Q06481 763 aa20.17■□□□□ 0.82
SRM-203ENST00000465788 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
SRM-203ENST00000465788 POLR1AO95602 1720 aaPredicted RBP20.15■□□□□ 0.82
SRM-203ENST00000465788 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
SRM-203ENST00000465788 FBXO31Q5XUX0 539 aaPredicted RBP20.12■□□□□ 0.81
SRM-203ENST00000465788 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
SRM-203ENST00000465788 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
SRM-203ENST00000465788 ZNF335Q9H4Z2 1342 aaPredicted RBP20.11■□□□□ 0.81
SRM-203ENST00000465788 ABCC3O15438 1527 aa20.1■□□□□ 0.81
SRM-203ENST00000465788 SHANK2Q9UPX8 1470 aa20.1■□□□□ 0.81
SRM-203ENST00000465788 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
SRM-203ENST00000465788 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.81
SRM-203ENST00000465788 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
SRM-203ENST00000465788 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
SRM-203ENST00000465788 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
SRM-203ENST00000465788 PTPN23Q9H3S7 1636 aa20.06■□□□□ 0.8
SRM-203ENST00000465788 CPS1P31327 1500 aa20.06■□□□□ 0.8
SRM-203ENST00000465788 NEURL4Q96JN8 1562 aa20.05■□□□□ 0.8
SRM-203ENST00000465788 ERBINQ96RT1 1412 aa20.05■□□□□ 0.8
SRM-203ENST00000465788 MROH1Q8NDA8 1641 aa20.04■□□□□ 0.8
SRM-203ENST00000465788 KIF15Q9NS87 1388 aa20.04■□□□□ 0.8
SRM-203ENST00000465788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
SRM-203ENST00000465788 MED14O60244 1454 aa20.03■□□□□ 0.8
SRM-203ENST00000465788 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
SRM-203ENST00000465788 CEP152O94986 1710 aa20.02■□□□□ 0.8
SRM-203ENST00000465788 UBAP1LF5GYI3 381 aa20.02■□□□□ 0.8
SRM-203ENST00000465788 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.79
SRM-203ENST00000465788 ABCC5O15440 1437 aa20.02■□□□□ 0.79
SRM-203ENST00000465788 FGD6Q6ZV73 1430 aa20.01■□□□□ 0.79
SRM-203ENST00000465788 DISP3Q9P2K9 1392 aa20■□□□□ 0.79
SRM-203ENST00000465788 NPHP4O75161 1426 aaPredicted RBP20■□□□□ 0.79
SRM-203ENST00000465788 DAPK1P53355 1430 aa20■□□□□ 0.79
SRM-203ENST00000465788 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
SRM-203ENST00000465788 KANK1Q14678 1352 aa19.98■□□□□ 0.79
SRM-203ENST00000465788 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
SRM-203ENST00000465788 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
SRM-203ENST00000465788 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
SRM-203ENST00000465788 RRP7BPQ9NSQ0 103 aa19.96■□□□□ 0.79
SRM-203ENST00000465788 TOM1O60784 492 aa19.95■□□□□ 0.78
SRM-203ENST00000465788 UBR1Q8IWV7 1749 aa19.94■□□□□ 0.78
SRM-203ENST00000465788 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
SRM-203ENST00000465788 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
SRM-203ENST00000465788 SCAF11Q99590 1463 aaKnown RBP19.9■□□□□ 0.78
SRM-203ENST00000465788 SLIT1O75093 1534 aa19.89■□□□□ 0.77
SRM-203ENST00000465788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.89■□□□□ 0.77
SRM-203ENST00000465788 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
SRM-203ENST00000465788 SYNMO15061 1565 aa19.88■□□□□ 0.77
SRM-203ENST00000465788 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
SRM-203ENST00000465788 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
SRM-203ENST00000465788 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
SRM-203ENST00000465788 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
SRM-203ENST00000465788 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
SRM-203ENST00000465788 TXNDC2Q86VQ3 553 aa19.84■□□□□ 0.77
SRM-203ENST00000465788 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
SRM-203ENST00000465788 PIK3C2BO00750 1634 aa19.84■□□□□ 0.77
SRM-203ENST00000465788 EFCAB6Q5THR3 1501 aa19.81■□□□□ 0.76
SRM-203ENST00000465788 PIP4K2BP78356 416 aa19.81■□□□□ 0.76
SRM-203ENST00000465788 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
SRM-203ENST00000465788 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
SRM-203ENST00000465788 LRRC7Q96NW7 1537 aa19.81■□□□□ 0.76
SRM-203ENST00000465788 STRCP1A6NGW2 1772 aa19.8■□□□□ 0.76
SRM-203ENST00000465788 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
SRM-203ENST00000465788 SOCS7O14512 581 aa19.8■□□□□ 0.76
SRM-203ENST00000465788 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
SRM-203ENST00000465788 ILDR2Q71H61 639 aa19.79■□□□□ 0.76
SRM-203ENST00000465788 NOS1P29475 1434 aa19.78■□□□□ 0.76
SRM-203ENST00000465788 LTKP29376 864 aa19.78■□□□□ 0.76
SRM-203ENST00000465788 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
SRM-203ENST00000465788 HSPA1LP34931 641 aa19.77■□□□□ 0.76
SRM-203ENST00000465788 IDI1Q13907 227 aa19.76■□□□□ 0.75
SRM-203ENST00000465788 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
SRM-203ENST00000465788 TET3O43151 1660 aa19.75■□□□□ 0.75
SRM-203ENST00000465788 ALKQ9UM73 1620 aa19.73■□□□□ 0.75
SRM-203ENST00000465788 GCC2Q8IWJ2 1684 aa19.72■□□□□ 0.75
SRM-203ENST00000465788 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
SRM-203ENST00000465788 UNC13BO14795 1591 aa19.7■□□□□ 0.74
SRM-203ENST00000465788 HDGFP51858 240 aaKnown RBP19.7■□□□□ 0.74
SRM-203ENST00000465788 MED1Q15648 1581 aaPredicted RBP19.7■□□□□ 0.74
SRM-203ENST00000465788 KCNA6P17658 529 aa19.67■□□□□ 0.74
SRM-203ENST00000465788 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
SRM-203ENST00000465788 NKTRP30414 1462 aaKnown RBP19.65■□□□□ 0.74
SRM-203ENST00000465788 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
SRM-203ENST00000465788 NWD1Q149M9 1564 aa19.63■□□□□ 0.73
SRM-203ENST00000465788 PLEKHG1Q9ULL1 1385 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms