RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 GGT6Q6P531 493 aa32.35■■■□□ 2.77
CD58-204ENST00000464088 A2ML1A8K2U0 1454 aa32.32■■■□□ 2.76
CD58-204ENST00000464088 DNMT1P26358 1616 aaKnown RBP32.32■■■□□ 2.76
CD58-204ENST00000464088 MIA2Q96PC5 1412 aa32.31■■■□□ 2.76
CD58-204ENST00000464088 ZNF644Q9H582 1327 aaPredicted RBP32.3■■■□□ 2.76
CD58-204ENST00000464088 CAMSAP2Q08AD1 1489 aa32.28■■■□□ 2.76
CD58-204ENST00000464088 POLR1AO95602 1720 aaPredicted RBP32.26■■■□□ 2.75
CD58-204ENST00000464088 MBD5Q9P267 1494 aa32.24■■■□□ 2.75
CD58-204ENST00000464088 PPARGC1BQ86YN6 1023 aaKnown RBP32.24■■■□□ 2.75
CD58-204ENST00000464088 RTEL1-TNFRSF6BF6WH68 1400 aa32.23■■■□□ 2.75
CD58-204ENST00000464088 CPS1P31327 1500 aa32.22■■■□□ 2.75
CD58-204ENST00000464088 FGD6Q6ZV73 1430 aa32.22■■■□□ 2.75
CD58-204ENST00000464088 NEURL4Q96JN8 1562 aa32.22■■■□□ 2.75
CD58-204ENST00000464088 DHX29Q7Z478 1369 aaKnown RBP32.19■■■□□ 2.74
CD58-204ENST00000464088 PTPN23Q9H3S7 1636 aa32.18■■■□□ 2.74
CD58-204ENST00000464088 MED1Q15648 1581 aaPredicted RBP32.18■■■□□ 2.74
CD58-204ENST00000464088 HSPA1LP34931 641 aa32.17■■■□□ 2.74
CD58-204ENST00000464088 SHANK2Q9UPX8 1470 aa32.16■■■□□ 2.74
CD58-204ENST00000464088 FAM135AQ9P2D6 1515 aa32.16■■■□□ 2.74
CD58-204ENST00000464088 TOM1O60784 492 aa32.15■■■□□ 2.74
CD58-204ENST00000464088 ARHGEF5Q12774 1597 aa32.15■■■□□ 2.74
CD58-204ENST00000464088 TNRQ92752 1358 aa32.14■■■□□ 2.74
CD58-204ENST00000464088 PZPP20742 1482 aa32.13■■■□□ 2.73
CD58-204ENST00000464088 KDM5DQ9BY66 1539 aa32.1■■■□□ 2.73
CD58-204ENST00000464088 CCDC141Q6ZP82 1450 aa32.1■■■□□ 2.73
CD58-204ENST00000464088 FBXO31Q5XUX0 539 aaPredicted RBP32.1■■■□□ 2.73
CD58-204ENST00000464088 PIP4K2BP78356 416 aa32.09■■■□□ 2.73
CD58-204ENST00000464088 SCAF1Q9H7N4 1312 aaKnown RBP32.08■■■□□ 2.73
CD58-204ENST00000464088 VWDEQ8N2E2 1590 aa32.08■■■□□ 2.73
CD58-204ENST00000464088 RSPH4AQ5TD94 716 aa32.08■■■□□ 2.73
CD58-204ENST00000464088 MED14O60244 1454 aa32.05■■■□□ 2.72
CD58-204ENST00000464088 DEPDC5O75140 1603 aa32.05■■■□□ 2.72
CD58-204ENST00000464088 KIF3BO15066 747 aa32.05■■■□□ 2.72
CD58-204ENST00000464088 ANKLE2Q86XL3 938 aa32.05■■■□□ 2.72
CD58-204ENST00000464088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.03■■■□□ 2.72
CD58-204ENST00000464088 ALKQ9UM73 1620 aa32.03■■■□□ 2.72
CD58-204ENST00000464088 NLRP1Q9C000 1473 aa32.03■■■□□ 2.72
CD58-204ENST00000464088 THEMISQ8N1K5 641 aaPredicted RBP32.02■■■□□ 2.72
CD58-204ENST00000464088 WASHC2CQ9Y4E1 1318 aa32■■■□□ 2.71
CD58-204ENST00000464088 UGGT1Q9NYU2 1555 aa31.99■■■□□ 2.71
CD58-204ENST00000464088 MAST1Q9Y2H9 1570 aa31.98■■■□□ 2.71
CD58-204ENST00000464088 ABCC5O15440 1437 aa31.98■■■□□ 2.71
CD58-204ENST00000464088 NPHP4O75161 1426 aaPredicted RBP31.98■■■□□ 2.71
CD58-204ENST00000464088 CROCC2H7BZ55 1655 aa31.98■■■□□ 2.71
CD58-204ENST00000464088 DAPK1P53355 1430 aa31.95■■■□□ 2.71
CD58-204ENST00000464088 RRBP1Q9P2E9 1410 aaKnown RBP31.95■■■□□ 2.71
CD58-204ENST00000464088 IQGAP1P46940 1657 aa31.95■■■□□ 2.7
CD58-204ENST00000464088 FAM50AQ14320 339 aaKnown RBP31.93■■■□□ 2.7
CD58-204ENST00000464088 TSPY4P0CV99 314 aa31.92■■■□□ 2.7
CD58-204ENST00000464088 TSPY10P0CW01 314 aa31.92■■■□□ 2.7
CD58-204ENST00000464088 STRCP1A6NGW2 1772 aa31.91■■■□□ 2.7
CD58-204ENST00000464088 RNF17Q9BXT8 1623 aaKnown RBP31.86■■■□□ 2.69
CD58-204ENST00000464088 LRRC7Q96NW7 1537 aa31.86■■■□□ 2.69
CD58-204ENST00000464088 PHF23Q9BUL5 403 aaPredicted RBP31.86■■■□□ 2.69
CD58-204ENST00000464088 SYNMO15061 1565 aa31.85■■■□□ 2.69
CD58-204ENST00000464088 ZC3H13Q5T200 1668 aaKnown RBP31.85■■■□□ 2.69
CD58-204ENST00000464088 ABCC3O15438 1527 aa31.81■■■□□ 2.68
CD58-204ENST00000464088 ADGRL2O95490 1459 aa31.78■■■□□ 2.68
CD58-204ENST00000464088 EIF2AK4Q9P2K8 1649 aaKnown RBP31.76■■■□□ 2.67
CD58-204ENST00000464088 ERVK-7P63135 1459 aa31.76■■■□□ 2.67
CD58-204ENST00000464088 UBR1Q8IWV7 1749 aa31.75■■■□□ 2.67
CD58-204ENST00000464088 CHIC2Q9UKJ5 165 aa31.73■■■□□ 2.67
CD58-204ENST00000464088 MROH1Q8NDA8 1641 aa31.71■■■□□ 2.67
CD58-204ENST00000464088 ANKRD30AQ9BXX3 1397 aa31.71■■■□□ 2.67
CD58-204ENST00000464088 KIF15Q9NS87 1388 aa31.7■■■□□ 2.67
CD58-204ENST00000464088 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.66
CD58-204ENST00000464088 SCAF11Q99590 1463 aaKnown RBP31.67■■■□□ 2.66
CD58-204ENST00000464088 CEP152O94986 1710 aa31.66■■■□□ 2.66
CD58-204ENST00000464088 XIRP1Q702N8 1843 aaKnown RBP31.66■■■□□ 2.66
CD58-204ENST00000464088 RRP7BPQ9NSQ0 103 aa31.66■■■□□ 2.66
CD58-204ENST00000464088 CFAP65Q6ZU64 1925 aaKnown RBP31.66■■■□□ 2.66
CD58-204ENST00000464088 ROCK1Q13464 1354 aa31.66■■■□□ 2.66
CD58-204ENST00000464088 ARHGAP23Q9P227 1491 aa31.65■■■□□ 2.66
CD58-204ENST00000464088 SLIT1O75093 1534 aa31.65■■■□□ 2.66
CD58-204ENST00000464088 ITGAEP38570 1179 aa31.65■■■□□ 2.66
CD58-204ENST00000464088 SENP3Q9H4L4 574 aaPredicted RBP31.63■■■□□ 2.65
CD58-204ENST00000464088 RGS17Q9UGC6 210 aaPredicted RBP31.63■■■□□ 2.65
CD58-204ENST00000464088 ERBINQ96RT1 1412 aa31.61■■■□□ 2.65
CD58-204ENST00000464088 LTKP29376 864 aa31.6■■■□□ 2.65
CD58-204ENST00000464088 ARHGAP31Q2M1Z3 1444 aa31.58■■■□□ 2.65
CD58-204ENST00000464088 TXNDC2Q86VQ3 553 aa31.56■■■□□ 2.64
CD58-204ENST00000464088 FAM135BQ49AJ0 1406 aa31.54■■■□□ 2.64
CD58-204ENST00000464088 PRDM15P57071 1507 aaPredicted RBP31.52■■■□□ 2.64
CD58-204ENST00000464088 ANKRD50Q9ULJ7 1429 aa31.51■■■□□ 2.64
CD58-204ENST00000464088 EID1Q9Y6B2 187 aa31.49■■■□□ 2.63
CD58-204ENST00000464088 PIK3C2BO00750 1634 aa31.48■■■□□ 2.63
CD58-204ENST00000464088 KDM5AP29375 1690 aaKnown RBP31.47■■■□□ 2.63
CD58-204ENST00000464088 TMEM2Q9UHN6 1383 aa31.45■■■□□ 2.63
CD58-204ENST00000464088 GCC2Q8IWJ2 1684 aa31.45■■■□□ 2.63
CD58-204ENST00000464088 NAIPQ13075 1403 aa31.44■■■□□ 2.62
CD58-204ENST00000464088 HFM1A2PYH4 1435 aa31.42■■■□□ 2.62
CD58-204ENST00000464088 TMEM94Q12767 1356 aa31.4■■■□□ 2.62
CD58-204ENST00000464088 ROBO1Q9Y6N7 1651 aa31.39■■■□□ 2.62
CD58-204ENST00000464088 POTEAQ6S8J7 498 aa31.39■■■□□ 2.62
CD58-204ENST00000464088 TET3O43151 1660 aa31.38■■■□□ 2.61
CD58-204ENST00000464088 KCNA6P17658 529 aa31.37■■■□□ 2.61
CD58-204ENST00000464088 EFCAB6Q5THR3 1501 aa31.37■■■□□ 2.61
CD58-204ENST00000464088 UNC13BO14795 1591 aa31.37■■■□□ 2.61
CD58-204ENST00000464088 LMTK2Q8IWU2 1503 aa31.33■■■□□ 2.61
CD58-204ENST00000464088 STAG3Q9UJ98 1225 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms