RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ZNF142P52746 1687 aaPredicted RBP22.59■■□□□ 1.21
SNRNP40-203ENST00000463988 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.21
SNRNP40-203ENST00000463988 MYO3AQ8NEV4 1616 aa22.58■■□□□ 1.21
SNRNP40-203ENST00000463988 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
SNRNP40-203ENST00000463988 CEP170BQ9Y4F5 1589 aaPredicted RBP22.56■■□□□ 1.2
SNRNP40-203ENST00000463988 PLA2R1Q13018 1463 aa22.56■■□□□ 1.2
SNRNP40-203ENST00000463988 PZPP20742 1482 aa22.54■■□□□ 1.2
SNRNP40-203ENST00000463988 PKD2Q13563 968 aa22.54■■□□□ 1.2
SNRNP40-203ENST00000463988 A2ML1A8K2U0 1454 aa22.53■■□□□ 1.2
SNRNP40-203ENST00000463988 TCOF1Q13428 1488 aaKnown RBP22.51■■□□□ 1.19
SNRNP40-203ENST00000463988 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
SNRNP40-203ENST00000463988 TNRQ92752 1358 aa22.5■■□□□ 1.19
SNRNP40-203ENST00000463988 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
SNRNP40-203ENST00000463988 FBXO31Q5XUX0 539 aaPredicted RBP22.5■■□□□ 1.19
SNRNP40-203ENST00000463988 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
SNRNP40-203ENST00000463988 LTBP4Q8N2S1 1624 aa22.49■■□□□ 1.19
SNRNP40-203ENST00000463988 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
SNRNP40-203ENST00000463988 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
SNRNP40-203ENST00000463988 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
SNRNP40-203ENST00000463988 ABCC5O15440 1437 aa22.46■■□□□ 1.19
SNRNP40-203ENST00000463988 PTPN23Q9H3S7 1636 aa22.46■■□□□ 1.19
SNRNP40-203ENST00000463988 IQSEC2Q5JU85 1478 aa22.45■■□□□ 1.18
SNRNP40-203ENST00000463988 ABCC3O15438 1527 aa22.44■■□□□ 1.18
SNRNP40-203ENST00000463988 ZC3H13Q5T200 1668 aaKnown RBP22.44■■□□□ 1.18
SNRNP40-203ENST00000463988 FGD6Q6ZV73 1430 aa22.44■■□□□ 1.18
SNRNP40-203ENST00000463988 NLRP1Q9C000 1473 aa22.43■■□□□ 1.18
SNRNP40-203ENST00000463988 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
SNRNP40-203ENST00000463988 CROCC2H7BZ55 1655 aa22.41■■□□□ 1.18
SNRNP40-203ENST00000463988 MROH1Q8NDA8 1641 aa22.41■■□□□ 1.18
SNRNP40-203ENST00000463988 DAPK1P53355 1430 aa22.4■■□□□ 1.18
SNRNP40-203ENST00000463988 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
SNRNP40-203ENST00000463988 ERBINQ96RT1 1412 aa22.4■■□□□ 1.18
SNRNP40-203ENST00000463988 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
SNRNP40-203ENST00000463988 RRP7BPQ9NSQ0 103 aa22.37■■□□□ 1.17
SNRNP40-203ENST00000463988 SPATA31D1Q6ZQQ2 1576 aa22.37■■□□□ 1.17
SNRNP40-203ENST00000463988 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
SNRNP40-203ENST00000463988 ANKLE2Q86XL3 938 aa22.35■■□□□ 1.17
SNRNP40-203ENST00000463988 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
SNRNP40-203ENST00000463988 PRDM15P57071 1507 aaPredicted RBP22.34■■□□□ 1.17
SNRNP40-203ENST00000463988 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
SNRNP40-203ENST00000463988 ARHGAP31Q2M1Z3 1444 aa22.33■■□□□ 1.17
SNRNP40-203ENST00000463988 POLR1AO95602 1720 aaPredicted RBP22.33■■□□□ 1.17
SNRNP40-203ENST00000463988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNRNP40-203ENST00000463988 NEURL4Q96JN8 1562 aa22.32■■□□□ 1.16
SNRNP40-203ENST00000463988 CEP152O94986 1710 aa22.31■■□□□ 1.16
SNRNP40-203ENST00000463988 MED14O60244 1454 aa22.29■■□□□ 1.16
SNRNP40-203ENST00000463988 DEPDC5O75140 1603 aa22.29■■□□□ 1.16
SNRNP40-203ENST00000463988 KANK1Q14678 1352 aa22.28■■□□□ 1.16
SNRNP40-203ENST00000463988 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
SNRNP40-203ENST00000463988 ADGRL2O95490 1459 aa22.27■■□□□ 1.16
SNRNP40-203ENST00000463988 NPHP4O75161 1426 aaPredicted RBP22.25■■□□□ 1.15
SNRNP40-203ENST00000463988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.25■■□□□ 1.15
SNRNP40-203ENST00000463988 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
SNRNP40-203ENST00000463988 CPS1P31327 1500 aa22.23■■□□□ 1.15
SNRNP40-203ENST00000463988 LMTK2Q8IWU2 1503 aa22.23■■□□□ 1.15
SNRNP40-203ENST00000463988 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
SNRNP40-203ENST00000463988 VWDEQ8N2E2 1590 aa22.22■■□□□ 1.15
SNRNP40-203ENST00000463988 UBAP1LF5GYI3 381 aa22.21■■□□□ 1.15
SNRNP40-203ENST00000463988 UBR1Q8IWV7 1749 aa22.2■■□□□ 1.14
SNRNP40-203ENST00000463988 IQGAP1P46940 1657 aa22.18■■□□□ 1.14
SNRNP40-203ENST00000463988 ARHGAP23Q9P227 1491 aa22.17■■□□□ 1.14
SNRNP40-203ENST00000463988 SLIT1O75093 1534 aa22.16■■□□□ 1.14
SNRNP40-203ENST00000463988 ANKRD50Q9ULJ7 1429 aa22.16■■□□□ 1.14
SNRNP40-203ENST00000463988 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
SNRNP40-203ENST00000463988 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
SNRNP40-203ENST00000463988 LTKP29376 864 aa22.12■■□□□ 1.13
SNRNP40-203ENST00000463988 TXNDC2Q86VQ3 553 aa22.12■■□□□ 1.13
SNRNP40-203ENST00000463988 EID1Q9Y6B2 187 aa22.12■■□□□ 1.13
SNRNP40-203ENST00000463988 NOS1P29475 1434 aa22.12■■□□□ 1.13
SNRNP40-203ENST00000463988 KDM5AP29375 1690 aaKnown RBP22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 PIK3C2BO00750 1634 aa22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 TOM1O60784 492 aa22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 IDI1Q13907 227 aa22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 TMEM2Q9UHN6 1383 aa22.11■■□□□ 1.13
SNRNP40-203ENST00000463988 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
SNRNP40-203ENST00000463988 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
SNRNP40-203ENST00000463988 SLC52A1Q9NWF4 448 aa22.09■■□□□ 1.13
SNRNP40-203ENST00000463988 SYNMO15061 1565 aa22.08■■□□□ 1.12
SNRNP40-203ENST00000463988 DISP3Q9P2K9 1392 aa22.06■■□□□ 1.12
SNRNP40-203ENST00000463988 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
SNRNP40-203ENST00000463988 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
SNRNP40-203ENST00000463988 TET3O43151 1660 aa22.03■■□□□ 1.12
SNRNP40-203ENST00000463988 UNC13BO14795 1591 aa22.03■■□□□ 1.12
SNRNP40-203ENST00000463988 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
SNRNP40-203ENST00000463988 PIP4K2BP78356 416 aa22■■□□□ 1.11
SNRNP40-203ENST00000463988 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SNRNP40-203ENST00000463988 GCC2Q8IWJ2 1684 aa21.98■■□□□ 1.11
SNRNP40-203ENST00000463988 ALKQ9UM73 1620 aa21.97■■□□□ 1.11
SNRNP40-203ENST00000463988 HSPA1LP34931 641 aa21.96■■□□□ 1.11
SNRNP40-203ENST00000463988 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
SNRNP40-203ENST00000463988 ITGAEP38570 1179 aa21.94■■□□□ 1.1
SNRNP40-203ENST00000463988 IQGAP3Q86VI3 1631 aa21.94■■□□□ 1.1
SNRNP40-203ENST00000463988 KCNA6P17658 529 aa21.93■■□□□ 1.1
SNRNP40-203ENST00000463988 HDGFP51858 240 aaKnown RBP21.93■■□□□ 1.1
SNRNP40-203ENST00000463988 ZFYVE9O95405 1425 aa21.92■■□□□ 1.1
SNRNP40-203ENST00000463988 NUP155O75694 1391 aa21.92■■□□□ 1.1
SNRNP40-203ENST00000463988 ILDR2Q71H61 639 aa21.91■■□□□ 1.1
SNRNP40-203ENST00000463988 E9PCH4 1651 aa21.91■■□□□ 1.1
SNRNP40-203ENST00000463988 SLC26A8Q96RN1 970 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms