RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 TOM1O60784 492 aa14.81□□□□□ -0.04
MDH1-209ENST00000462944 CFDP1Q9UEE9 299 aaPredicted RBP14.81□□□□□ -0.04
MDH1-209ENST00000462944 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
MDH1-209ENST00000462944 HNRNPMP52272 730 aaKnown RBP eCLIP14.8□□□□□ -0.04
MDH1-209ENST00000462944 DEPDC5O75140 1603 aa14.8□□□□□ -0.04
MDH1-209ENST00000462944 GGT6Q6P531 493 aa14.79□□□□□ -0.04
MDH1-209ENST00000462944 NEURL4Q96JN8 1562 aa14.78□□□□□ -0.04
MDH1-209ENST00000462944 EHMT2Q96KQ7 1210 aa14.78□□□□□ -0.04
MDH1-209ENST00000462944 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
MDH1-209ENST00000462944 SHANK2Q9UPX8 1470 aa14.77□□□□□ -0.04
MDH1-209ENST00000462944 PZPP20742 1482 aa14.76□□□□□ -0.05
MDH1-209ENST00000462944 NLRP1Q9C000 1473 aa14.76□□□□□ -0.05
MDH1-209ENST00000462944 MTUS2Q5JR59 1369 aa14.75□□□□□ -0.05
MDH1-209ENST00000462944 DHX29Q7Z478 1369 aaKnown RBP14.75□□□□□ -0.05
MDH1-209ENST00000462944 TIAM1Q13009 1591 aa14.75□□□□□ -0.05
MDH1-209ENST00000462944 EHBP1L1Q8N3D4 1523 aa14.75□□□□□ -0.05
MDH1-209ENST00000462944 TNRQ92752 1358 aa14.74□□□□□ -0.05
MDH1-209ENST00000462944 MED14O60244 1454 aa14.74□□□□□ -0.05
MDH1-209ENST00000462944 IQGAP1P46940 1657 aa14.74□□□□□ -0.05
MDH1-209ENST00000462944 ZC3H13Q5T200 1668 aaKnown RBP14.74□□□□□ -0.05
MDH1-209ENST00000462944 SYNMO15061 1565 aa14.73□□□□□ -0.05
MDH1-209ENST00000462944 RSPH4AQ5TD94 716 aa14.73□□□□□ -0.05
MDH1-209ENST00000462944 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
MDH1-209ENST00000462944 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
MDH1-209ENST00000462944 VWDEQ8N2E2 1590 aa14.72□□□□□ -0.05
MDH1-209ENST00000462944 UGGT1Q9NYU2 1555 aa14.72□□□□□ -0.05
MDH1-209ENST00000462944 HSPA1LP34931 641 aa14.71□□□□□ -0.05
MDH1-209ENST00000462944 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
MDH1-209ENST00000462944 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
MDH1-209ENST00000462944 CCDC141Q6ZP82 1450 aa14.69□□□□□ -0.06
MDH1-209ENST00000462944 CEP162Q5TB80 1403 aa14.69□□□□□ -0.06
MDH1-209ENST00000462944 PIP4K2BP78356 416 aa14.68□□□□□ -0.06
MDH1-209ENST00000462944 NPHP4O75161 1426 aaPredicted RBP14.67□□□□□ -0.06
MDH1-209ENST00000462944 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
MDH1-209ENST00000462944 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
MDH1-209ENST00000462944 WASHC2CQ9Y4E1 1318 aa14.66□□□□□ -0.06
MDH1-209ENST00000462944 EIF2AK4Q9P2K8 1649 aaKnown RBP14.66□□□□□ -0.06
MDH1-209ENST00000462944 STRCP1A6NGW2 1772 aa14.66□□□□□ -0.06
MDH1-209ENST00000462944 KIF3BO15066 747 aa14.66□□□□□ -0.06
MDH1-209ENST00000462944 ALKQ9UM73 1620 aa14.66□□□□□ -0.06
MDH1-209ENST00000462944 CFAP65Q6ZU64 1925 aaKnown RBP14.65□□□□□ -0.06
MDH1-209ENST00000462944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
MDH1-209ENST00000462944 CAMSAP2Q08AD1 1489 aa14.63□□□□□ -0.07
MDH1-209ENST00000462944 FBXO31Q5XUX0 539 aaPredicted RBP14.62□□□□□ -0.07
MDH1-209ENST00000462944 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
MDH1-209ENST00000462944 MAST1Q9Y2H9 1570 aa14.62□□□□□ -0.07
MDH1-209ENST00000462944 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
MDH1-209ENST00000462944 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
MDH1-209ENST00000462944 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
MDH1-209ENST00000462944 XIRP1Q702N8 1843 aaKnown RBP14.59□□□□□ -0.07
MDH1-209ENST00000462944 TSPY4P0CV99 314 aa14.59□□□□□ -0.07
MDH1-209ENST00000462944 TSPY10P0CW01 314 aa14.59□□□□□ -0.07
MDH1-209ENST00000462944 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
MDH1-209ENST00000462944 CEP152O94986 1710 aa14.58□□□□□ -0.07
MDH1-209ENST00000462944 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
MDH1-209ENST00000462944 ABCC3O15438 1527 aa14.58□□□□□ -0.08
MDH1-209ENST00000462944 ERVK-7P63135 1459 aa14.57□□□□□ -0.08
MDH1-209ENST00000462944 SCAF11Q99590 1463 aaKnown RBP14.56□□□□□ -0.08
MDH1-209ENST00000462944 SLIT1O75093 1534 aa14.56□□□□□ -0.08
MDH1-209ENST00000462944 MROH1Q8NDA8 1641 aa14.53□□□□□ -0.08
MDH1-209ENST00000462944 ARHGAP23Q9P227 1491 aa14.53□□□□□ -0.08
MDH1-209ENST00000462944 DUOX2Q9NRD8 1548 aa14.51□□□□□ -0.09
MDH1-209ENST00000462944 ARHGAP31Q2M1Z3 1444 aa14.51□□□□□ -0.09
MDH1-209ENST00000462944 PRDM15P57071 1507 aaPredicted RBP14.5□□□□□ -0.09
MDH1-209ENST00000462944 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
MDH1-209ENST00000462944 EID1Q9Y6B2 187 aa14.48□□□□□ -0.09
MDH1-209ENST00000462944 LRRC9Q6ZRR7 1453 aa14.48□□□□□ -0.09
MDH1-209ENST00000462944 CROCC2H7BZ55 1655 aa14.48□□□□□ -0.09
MDH1-209ENST00000462944 PIK3C2BO00750 1634 aa14.47□□□□□ -0.09
MDH1-209ENST00000462944 MAP3K1Q13233 1512 aa14.46□□□□□ -0.1
MDH1-209ENST00000462944 ROBO1Q9Y6N7 1651 aa14.46□□□□□ -0.1
MDH1-209ENST00000462944 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
MDH1-209ENST00000462944 TXNDC2Q86VQ3 553 aa14.45□□□□□ -0.1
MDH1-209ENST00000462944 ERBINQ96RT1 1412 aa14.45□□□□□ -0.1
MDH1-209ENST00000462944 MYOM3Q5VTT5 1437 aa14.44□□□□□ -0.1
MDH1-209ENST00000462944 RGS17Q9UGC6 210 aaPredicted RBP14.43□□□□□ -0.1
MDH1-209ENST00000462944 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
MDH1-209ENST00000462944 EFCAB6Q5THR3 1501 aa14.42□□□□□ -0.1
MDH1-209ENST00000462944 TMEM2Q9UHN6 1383 aa14.42□□□□□ -0.1
MDH1-209ENST00000462944 NWD1Q149M9 1564 aa14.42□□□□□ -0.1
MDH1-209ENST00000462944 PHLPP1O60346 1717 aa14.41□□□□□ -0.1
MDH1-209ENST00000462944 LTKP29376 864 aa14.41□□□□□ -0.1
MDH1-209ENST00000462944 KANK1Q14678 1352 aa14.4□□□□□ -0.1
MDH1-209ENST00000462944 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
MDH1-209ENST00000462944 TET3O43151 1660 aa14.39□□□□□ -0.11
MDH1-209ENST00000462944 KCNA6P17658 529 aa14.39□□□□□ -0.11
MDH1-209ENST00000462944 LMTK2Q8IWU2 1503 aa14.39□□□□□ -0.11
MDH1-209ENST00000462944 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
MDH1-209ENST00000462944 VPS8Q8N3P4 1428 aa14.38□□□□□ -0.11
MDH1-209ENST00000462944 TMEM94Q12767 1356 aa14.37□□□□□ -0.11
MDH1-209ENST00000462944 KIF15Q9NS87 1388 aa14.37□□□□□ -0.11
MDH1-209ENST00000462944 ADGRB3O60242 1522 aa14.36□□□□□ -0.11
MDH1-209ENST00000462944 MSH6P52701 1360 aa14.35□□□□□ -0.11
MDH1-209ENST00000462944 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
MDH1-209ENST00000462944 MYO5BQ9ULV0 1848 aa14.35□□□□□ -0.11
MDH1-209ENST00000462944 SETD1AO15047 1707 aaKnown RBP14.35□□□□□ -0.11
MDH1-209ENST00000462944 PTPN23Q9H3S7 1636 aa14.34□□□□□ -0.11
MDH1-209ENST00000462944 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
MDH1-209ENST00000462944 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
MDH1-209ENST00000462944 PROSER2Q86WR7 435 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms