RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 STRCQ7RTU9 1775 aa15.91■□□□□ 0.14
SF3A3-204ENST00000462258 ZMYM3Q14202 1370 aa15.9■□□□□ 0.14
SF3A3-204ENST00000462258 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SF3A3-204ENST00000462258 CEP170BQ9Y4F5 1589 aaPredicted RBP15.88■□□□□ 0.13
SF3A3-204ENST00000462258 ABCC5O15440 1437 aa15.88■□□□□ 0.13
SF3A3-204ENST00000462258 DAPK1P53355 1430 aa15.88■□□□□ 0.13
SF3A3-204ENST00000462258 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
SF3A3-204ENST00000462258 MROH1Q8NDA8 1641 aa15.88■□□□□ 0.13
SF3A3-204ENST00000462258 KIF3BO15066 747 aa15.87■□□□□ 0.13
SF3A3-204ENST00000462258 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
SF3A3-204ENST00000462258 CEP152O94986 1710 aa15.86■□□□□ 0.13
SF3A3-204ENST00000462258 PZPP20742 1482 aa15.85■□□□□ 0.13
SF3A3-204ENST00000462258 ABCC3O15438 1527 aa15.85■□□□□ 0.13
SF3A3-204ENST00000462258 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
SF3A3-204ENST00000462258 CAMSAP1Q5T5Y3 1602 aa15.84■□□□□ 0.13
SF3A3-204ENST00000462258 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
SF3A3-204ENST00000462258 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
SF3A3-204ENST00000462258 DEPDC5O75140 1603 aa15.83■□□□□ 0.13
SF3A3-204ENST00000462258 NCOA1Q15788 1441 aa15.82■□□□□ 0.12
SF3A3-204ENST00000462258 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
SF3A3-204ENST00000462258 A2ML1A8K2U0 1454 aa15.79■□□□□ 0.12
SF3A3-204ENST00000462258 ADGRL2O95490 1459 aa15.79■□□□□ 0.12
SF3A3-204ENST00000462258 PLA2R1Q13018 1463 aa15.78■□□□□ 0.12
SF3A3-204ENST00000462258 POLR1AO95602 1720 aaPredicted RBP15.78■□□□□ 0.12
SF3A3-204ENST00000462258 SPATA31D1Q6ZQQ2 1576 aa15.78■□□□□ 0.12
SF3A3-204ENST00000462258 TNRQ92752 1358 aa15.77■□□□□ 0.12
SF3A3-204ENST00000462258 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.12
SF3A3-204ENST00000462258 ILDR1Q86SU0 546 aaPredicted RBP15.77■□□□□ 0.12
SF3A3-204ENST00000462258 PTPRTO14522 1441 aa15.77■□□□□ 0.11
SF3A3-204ENST00000462258 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
SF3A3-204ENST00000462258 RRP7BPQ9NSQ0 103 aa15.75■□□□□ 0.11
SF3A3-204ENST00000462258 ERVK-7P63135 1459 aa15.74■□□□□ 0.11
SF3A3-204ENST00000462258 NLRP1Q9C000 1473 aa15.74■□□□□ 0.11
SF3A3-204ENST00000462258 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
SF3A3-204ENST00000462258 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
SF3A3-204ENST00000462258 VWDEQ8N2E2 1590 aa15.72■□□□□ 0.11
SF3A3-204ENST00000462258 CHIC2Q9UKJ5 165 aa15.72■□□□□ 0.11
SF3A3-204ENST00000462258 CFAP65Q6ZU64 1925 aaKnown RBP15.72■□□□□ 0.11
SF3A3-204ENST00000462258 UGGT1Q9NYU2 1555 aa15.71■□□□□ 0.11
SF3A3-204ENST00000462258 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.11
SF3A3-204ENST00000462258 NEURL4Q96JN8 1562 aa15.7■□□□□ 0.1
SF3A3-204ENST00000462258 ARHGAP31Q2M1Z3 1444 aa15.69■□□□□ 0.1
SF3A3-204ENST00000462258 EFCAB6Q5THR3 1501 aa15.69■□□□□ 0.1
SF3A3-204ENST00000462258 KANK1Q14678 1352 aa15.69■□□□□ 0.1
SF3A3-204ENST00000462258 UNC13BO14795 1591 aa15.69■□□□□ 0.1
SF3A3-204ENST00000462258 UBR1Q8IWV7 1749 aa15.68■□□□□ 0.1
SF3A3-204ENST00000462258 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
SF3A3-204ENST00000462258 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
SF3A3-204ENST00000462258 ANKRD50Q9ULJ7 1429 aa15.68■□□□□ 0.1
SF3A3-204ENST00000462258 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
SF3A3-204ENST00000462258 PKD2Q13563 968 aa15.66■□□□□ 0.1
SF3A3-204ENST00000462258 TET3O43151 1660 aa15.65■□□□□ 0.1
SF3A3-204ENST00000462258 GCC2Q8IWJ2 1684 aa15.65■□□□□ 0.1
SF3A3-204ENST00000462258 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
SF3A3-204ENST00000462258 CERKQ8TCT0 537 aa15.65■□□□□ 0.1
SF3A3-204ENST00000462258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.65■□□□□ 0.12e-10■■■□□ 18.1
SF3A3-204ENST00000462258 PIK3C2BO00750 1634 aa15.65■□□□□ 0.1
SF3A3-204ENST00000462258 ROCK1Q13464 1354 aa15.64■□□□□ 0.09
SF3A3-204ENST00000462258 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
SF3A3-204ENST00000462258 SYNMO15061 1565 aa15.63■□□□□ 0.09
SF3A3-204ENST00000462258 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
SF3A3-204ENST00000462258 IQGAP1P46940 1657 aa15.63■□□□□ 0.09
SF3A3-204ENST00000462258 IQGAP3Q86VI3 1631 aa15.61■□□□□ 0.09
SF3A3-204ENST00000462258 RRBP1Q9P2E9 1410 aaKnown RBP15.61■□□□□ 0.09
SF3A3-204ENST00000462258 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
SF3A3-204ENST00000462258 MED14O60244 1454 aa15.59■□□□□ 0.09
SF3A3-204ENST00000462258 RPRD2Q5VT52 1461 aaKnown RBP15.59■□□□□ 0.09
SF3A3-204ENST00000462258 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
SF3A3-204ENST00000462258 E9PCH4 1651 aa15.58■□□□□ 0.08
SF3A3-204ENST00000462258 ZNF335Q9H4Z2 1342 aaPredicted RBP15.58■□□□□ 0.08
SF3A3-204ENST00000462258 ADGRB3O60242 1522 aa15.58■□□□□ 0.08
SF3A3-204ENST00000462258 SLIT1O75093 1534 aa15.58■□□□□ 0.08
SF3A3-204ENST00000462258 ITGAEP38570 1179 aa15.57■□□□□ 0.08
SF3A3-204ENST00000462258 NPHP4O75161 1426 aaPredicted RBP15.57■□□□□ 0.08
SF3A3-204ENST00000462258 NOS1P29475 1434 aa15.57■□□□□ 0.08
SF3A3-204ENST00000462258 ARHGAP23Q9P227 1491 aa15.57■□□□□ 0.08
SF3A3-204ENST00000462258 ANKLE2Q86XL3 938 aa15.56■□□□□ 0.08
SF3A3-204ENST00000462258 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
SF3A3-204ENST00000462258 MYO5BQ9ULV0 1848 aa15.54■□□□□ 0.08
SF3A3-204ENST00000462258 CPS1P31327 1500 aa15.53■□□□□ 0.08
SF3A3-204ENST00000462258 STRCP1A6NGW2 1772 aa15.51■□□□□ 0.07
SF3A3-204ENST00000462258 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
SF3A3-204ENST00000462258 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
SF3A3-204ENST00000462258 TMEM131LA2VDJ0 1609 aa15.48■□□□□ 0.07
SF3A3-204ENST00000462258 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
SF3A3-204ENST00000462258 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
SF3A3-204ENST00000462258 NUP155O75694 1391 aa15.48■□□□□ 0.07
SF3A3-204ENST00000462258 NAIPQ13075 1403 aa15.47■□□□□ 0.07
SF3A3-204ENST00000462258 IDI1Q13907 227 aa15.47■□□□□ 0.07
SF3A3-204ENST00000462258 LTKP29376 864 aa15.45■□□□□ 0.06
SF3A3-204ENST00000462258 SLC52A1Q9NWF4 448 aa15.45■□□□□ 0.06
SF3A3-204ENST00000462258 HFM1A2PYH4 1435 aa15.44■□□□□ 0.06
SF3A3-204ENST00000462258 TXNDC2Q86VQ3 553 aa15.44■□□□□ 0.06
SF3A3-204ENST00000462258 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
SF3A3-204ENST00000462258 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
SF3A3-204ENST00000462258 LRRC7Q96NW7 1537 aa15.41■□□□□ 0.06
SF3A3-204ENST00000462258 XIRP1Q702N8 1843 aaKnown RBP15.4■□□□□ 0.06
SF3A3-204ENST00000462258 TRPM2O94759 1503 aa15.4■□□□□ 0.06
SF3A3-204ENST00000462258 NWD1Q149M9 1564 aa15.4■□□□□ 0.06
SF3A3-204ENST00000462258 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms