RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
RER1-206ENST00000462129 RTEL1-TNFRSF6BF6WH68 1400 aa28.01■■■□□ 2.07
RER1-206ENST00000462129 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
RER1-206ENST00000462129 TNRQ92752 1358 aa27.99■■■□□ 2.07
RER1-206ENST00000462129 POLR1AO95602 1720 aaPredicted RBP27.98■■■□□ 2.07
RER1-206ENST00000462129 SCAF1Q9H7N4 1312 aaKnown RBP27.98■■■□□ 2.07
RER1-206ENST00000462129 NEURL4Q96JN8 1562 aa27.96■■■□□ 2.07
RER1-206ENST00000462129 KDM5DQ9BY66 1539 aa27.95■■■□□ 2.06
RER1-206ENST00000462129 CPS1P31327 1500 aa27.94■■■□□ 2.06
RER1-206ENST00000462129 KIF3BO15066 747 aa27.94■■■□□ 2.06
RER1-206ENST00000462129 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
RER1-206ENST00000462129 FBXO31Q5XUX0 539 aaPredicted RBP27.94■■■□□ 2.06
RER1-206ENST00000462129 PZPP20742 1482 aa27.94■■■□□ 2.06
RER1-206ENST00000462129 CCDC141Q6ZP82 1450 aa27.92■■■□□ 2.06
RER1-206ENST00000462129 HSPA1LP34931 641 aa27.92■■■□□ 2.06
RER1-206ENST00000462129 SHANK2Q9UPX8 1470 aa27.91■■■□□ 2.06
RER1-206ENST00000462129 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
RER1-206ENST00000462129 MED1Q15648 1581 aaPredicted RBP27.9■■■□□ 2.06
RER1-206ENST00000462129 LRRC9Q6ZRR7 1453 aa27.9■■■□□ 2.06
RER1-206ENST00000462129 TOM1O60784 492 aa27.89■■■□□ 2.06
RER1-206ENST00000462129 CAMSAP2Q08AD1 1489 aa27.88■■■□□ 2.05
RER1-206ENST00000462129 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
RER1-206ENST00000462129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.86■■■□□ 2.05
RER1-206ENST00000462129 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
RER1-206ENST00000462129 VWDEQ8N2E2 1590 aa27.83■■■□□ 2.05
RER1-206ENST00000462129 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
RER1-206ENST00000462129 NLRP1Q9C000 1473 aa27.83■■■□□ 2.04
RER1-206ENST00000462129 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
RER1-206ENST00000462129 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
RER1-206ENST00000462129 KANK4Q5T7N3 995 aaPredicted RBP27.81■■■□□ 2.04
RER1-206ENST00000462129 THEMISQ8N1K5 641 aaPredicted RBP27.81■■■□□ 2.04
RER1-206ENST00000462129 NPHP4O75161 1426 aaPredicted RBP27.81■■■□□ 2.04
RER1-206ENST00000462129 DEPDC5O75140 1603 aa27.78■■■□□ 2.04
RER1-206ENST00000462129 RSPH4AQ5TD94 716 aa27.78■■■□□ 2.04
RER1-206ENST00000462129 MED14O60244 1454 aa27.77■■■□□ 2.04
RER1-206ENST00000462129 ARHGEF5Q12774 1597 aa27.75■■■□□ 2.03
RER1-206ENST00000462129 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
RER1-206ENST00000462129 ALKQ9UM73 1620 aa27.74■■■□□ 2.03
RER1-206ENST00000462129 TSPY4P0CV99 314 aa27.72■■■□□ 2.03
RER1-206ENST00000462129 TSPY10P0CW01 314 aa27.72■■■□□ 2.03
RER1-206ENST00000462129 PHF23Q9BUL5 403 aaPredicted RBP27.71■■■□□ 2.03
RER1-206ENST00000462129 RNF17Q9BXT8 1623 aaKnown RBP27.7■■■□□ 2.03
RER1-206ENST00000462129 ABCC3O15438 1527 aa27.7■■■□□ 2.02
RER1-206ENST00000462129 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
RER1-206ENST00000462129 SENP3Q9H4L4 574 aaPredicted RBP27.67■■■□□ 2.02
RER1-206ENST00000462129 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
RER1-206ENST00000462129 STRCP1A6NGW2 1772 aa27.65■■■□□ 2.02
RER1-206ENST00000462129 SYNMO15061 1565 aa27.65■■■□□ 2.02
RER1-206ENST00000462129 ERVK-7P63135 1459 aa27.65■■■□□ 2.02
RER1-206ENST00000462129 LRRC7Q96NW7 1537 aa27.65■■■□□ 2.02
RER1-206ENST00000462129 MAST1Q9Y2H9 1570 aa27.63■■■□□ 2.01
RER1-206ENST00000462129 EIF2AK4Q9P2K8 1649 aaKnown RBP27.62■■■□□ 2.01
RER1-206ENST00000462129 MYOM3Q5VTT5 1437 aa27.59■■■□□ 2.01
RER1-206ENST00000462129 MROH1Q8NDA8 1641 aa27.59■■■□□ 2.01
RER1-206ENST00000462129 CEP152O94986 1710 aa27.58■■■□□ 2.01
RER1-206ENST00000462129 UBR1Q8IWV7 1749 aa27.56■■■□□ 2
RER1-206ENST00000462129 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
RER1-206ENST00000462129 CFAP65Q6ZU64 1925 aaKnown RBP27.51■■□□□ 1.99
RER1-206ENST00000462129 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
RER1-206ENST00000462129 FGD6Q6ZV73 1430 aa27.48■■□□□ 1.99
RER1-206ENST00000462129 SLIT1O75093 1534 aa27.47■■□□□ 1.99
RER1-206ENST00000462129 ARHGAP23Q9P227 1491 aa27.47■■□□□ 1.99
RER1-206ENST00000462129 LTKP29376 864 aa27.47■■□□□ 1.99
RER1-206ENST00000462129 TXNDC2Q86VQ3 553 aa27.47■■□□□ 1.99
RER1-206ENST00000462129 PRDM15P57071 1507 aaPredicted RBP27.44■■□□□ 1.98
RER1-206ENST00000462129 PTPN23Q9H3S7 1636 aa27.44■■□□□ 1.98
RER1-206ENST00000462129 KIF15Q9NS87 1388 aa27.42■■□□□ 1.98
RER1-206ENST00000462129 ARHGAP31Q2M1Z3 1444 aa27.41■■□□□ 1.98
RER1-206ENST00000462129 XIRP1Q702N8 1843 aaKnown RBP27.41■■□□□ 1.98
RER1-206ENST00000462129 EID1Q9Y6B2 187 aa27.41■■□□□ 1.98
RER1-206ENST00000462129 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
RER1-206ENST00000462129 PIK3C2BO00750 1634 aa27.39■■□□□ 1.98
RER1-206ENST00000462129 ERBINQ96RT1 1412 aa27.39■■□□□ 1.97
RER1-206ENST00000462129 RGS17Q9UGC6 210 aaPredicted RBP27.37■■□□□ 1.97
RER1-206ENST00000462129 CROCC2H7BZ55 1655 aa27.36■■□□□ 1.97
RER1-206ENST00000462129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
RER1-206ENST00000462129 TMEM2Q9UHN6 1383 aa27.35■■□□□ 1.97
RER1-206ENST00000462129 RRP7BPQ9NSQ0 103 aa27.35■■□□□ 1.97
RER1-206ENST00000462129 STAG3Q9UJ98 1225 aa27.35■■□□□ 1.97
RER1-206ENST00000462129 ABCC5O15440 1437 aa27.33■■□□□ 1.96
RER1-206ENST00000462129 FAM135BQ49AJ0 1406 aa27.32■■□□□ 1.96
RER1-206ENST00000462129 TMEM94Q12767 1356 aa27.31■■□□□ 1.96
RER1-206ENST00000462129 KANK1Q14678 1352 aa27.31■■□□□ 1.96
RER1-206ENST00000462129 EFCAB6Q5THR3 1501 aa27.31■■□□□ 1.96
RER1-206ENST00000462129 RRBP1Q9P2E9 1410 aaKnown RBP27.29■■□□□ 1.96
RER1-206ENST00000462129 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
RER1-206ENST00000462129 DAPK1P53355 1430 aa27.26■■□□□ 1.95
RER1-206ENST00000462129 ROBO1Q9Y6N7 1651 aa27.26■■□□□ 1.95
RER1-206ENST00000462129 KCNA6P17658 529 aa27.25■■□□□ 1.95
RER1-206ENST00000462129 IDI1Q13907 227 aa27.24■■□□□ 1.95
RER1-206ENST00000462129 SLC26A8Q96RN1 970 aa27.24■■□□□ 1.95
RER1-206ENST00000462129 LMTK2Q8IWU2 1503 aa27.24■■□□□ 1.95
RER1-206ENST00000462129 PROSER2Q86WR7 435 aaPredicted RBP27.23■■□□□ 1.95
RER1-206ENST00000462129 RBM33Q96EV2 1170 aaKnown RBP27.23■■□□□ 1.95
RER1-206ENST00000462129 TET3O43151 1660 aa27.21■■□□□ 1.95
RER1-206ENST00000462129 POTEAQ6S8J7 498 aa27.21■■□□□ 1.95
RER1-206ENST00000462129 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
RER1-206ENST00000462129 NKTRP30414 1462 aaKnown RBP27.19■■□□□ 1.94
RER1-206ENST00000462129 NWD1Q149M9 1564 aa27.18■■□□□ 1.94
RER1-206ENST00000462129 ITGAEP38570 1179 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms