RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 KDM5DQ9BY66 1539 aa28.25■■■□□ 2.11
SSB-206ENST00000461708 KANK4Q5T7N3 995 aaPredicted RBP28.25■■■□□ 2.11
SSB-206ENST00000461708 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
SSB-206ENST00000461708 PKD2Q13563 968 aa28.24■■■□□ 2.11
SSB-206ENST00000461708 LTBP4Q8N2S1 1624 aa28.24■■■□□ 2.11
SSB-206ENST00000461708 MYOM3Q5VTT5 1437 aa28.23■■■□□ 2.11
SSB-206ENST00000461708 TCOF1Q13428 1488 aaKnown RBP28.22■■■□□ 2.11
SSB-206ENST00000461708 A2ML1A8K2U0 1454 aa28.21■■■□□ 2.11
SSB-206ENST00000461708 PZPP20742 1482 aa28.21■■■□□ 2.11
SSB-206ENST00000461708 IQSEC2Q5JU85 1478 aa28.21■■■□□ 2.11
SSB-206ENST00000461708 WASHC2CQ9Y4E1 1318 aa28.19■■■□□ 2.1
SSB-206ENST00000461708 NCKAP5LQ9HCH0 1330 aa28.18■■■□□ 2.1
SSB-206ENST00000461708 TNRQ92752 1358 aa28.16■■■□□ 2.1
SSB-206ENST00000461708 DNMT1P26358 1616 aaKnown RBP28.16■■■□□ 2.1
SSB-206ENST00000461708 RNF17Q9BXT8 1623 aaKnown RBP28.15■■■□□ 2.1
SSB-206ENST00000461708 EIF2AK4Q9P2K8 1649 aaKnown RBP28.14■■■□□ 2.09
SSB-206ENST00000461708 FBXO31Q5XUX0 539 aaPredicted RBP28.13■■■□□ 2.09
SSB-206ENST00000461708 APLP2Q06481 763 aa28.09■■■□□ 2.09
SSB-206ENST00000461708 ZC3H13Q5T200 1668 aaKnown RBP28.09■■■□□ 2.09
SSB-206ENST00000461708 NLRP1Q9C000 1473 aa28.08■■■□□ 2.09
SSB-206ENST00000461708 ABCC3O15438 1527 aa28.07■■■□□ 2.08
SSB-206ENST00000461708 SHANK2Q9UPX8 1470 aa28.06■■■□□ 2.08
SSB-206ENST00000461708 DUOX2Q9NRD8 1548 aa28.06■■■□□ 2.08
SSB-206ENST00000461708 ZNF335Q9H4Z2 1342 aaPredicted RBP28.05■■■□□ 2.08
SSB-206ENST00000461708 POLR1AO95602 1720 aaPredicted RBP28.03■■■□□ 2.08
SSB-206ENST00000461708 MROH1Q8NDA8 1641 aa28.03■■■□□ 2.08
SSB-206ENST00000461708 THEMISQ8N1K5 641 aaPredicted RBP28.02■■■□□ 2.08
SSB-206ENST00000461708 PTPN23Q9H3S7 1636 aa28.02■■■□□ 2.08
SSB-206ENST00000461708 ABCC5O15440 1437 aa28.01■■■□□ 2.07
SSB-206ENST00000461708 CROCC2H7BZ55 1655 aa28■■■□□ 2.07
SSB-206ENST00000461708 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
SSB-206ENST00000461708 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
SSB-206ENST00000461708 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
SSB-206ENST00000461708 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
SSB-206ENST00000461708 ANKLE2Q86XL3 938 aa27.97■■■□□ 2.07
SSB-206ENST00000461708 FGD6Q6ZV73 1430 aa27.97■■■□□ 2.07
SSB-206ENST00000461708 ERBINQ96RT1 1412 aa27.97■■■□□ 2.07
SSB-206ENST00000461708 ERVK-7P63135 1459 aa27.95■■■□□ 2.06
SSB-206ENST00000461708 DAPK1P53355 1430 aa27.94■■■□□ 2.06
SSB-206ENST00000461708 DEPDC5O75140 1603 aa27.94■■■□□ 2.06
SSB-206ENST00000461708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.94■■■□□ 2.06
SSB-206ENST00000461708 MED14O60244 1454 aa27.94■■■□□ 2.06
SSB-206ENST00000461708 PRDM15P57071 1507 aaPredicted RBP27.93■■■□□ 2.06
SSB-206ENST00000461708 ARHGAP31Q2M1Z3 1444 aa27.92■■■□□ 2.06
SSB-206ENST00000461708 CEP152O94986 1710 aa27.91■■■□□ 2.06
SSB-206ENST00000461708 CPS1P31327 1500 aa27.9■■■□□ 2.06
SSB-206ENST00000461708 RRP7BPQ9NSQ0 103 aa27.89■■■□□ 2.06
SSB-206ENST00000461708 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
SSB-206ENST00000461708 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
SSB-206ENST00000461708 UBAP1LF5GYI3 381 aa27.86■■■□□ 2.05
SSB-206ENST00000461708 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
SSB-206ENST00000461708 VWDEQ8N2E2 1590 aa27.83■■■□□ 2.05
SSB-206ENST00000461708 KANK1Q14678 1352 aa27.82■■■□□ 2.04
SSB-206ENST00000461708 IQGAP1P46940 1657 aa27.81■■■□□ 2.04
SSB-206ENST00000461708 UBR1Q8IWV7 1749 aa27.81■■■□□ 2.04
SSB-206ENST00000461708 LMTK2Q8IWU2 1503 aa27.79■■■□□ 2.04
SSB-206ENST00000461708 ADGRL2O95490 1459 aa27.79■■■□□ 2.04
SSB-206ENST00000461708 DISP3Q9P2K9 1392 aa27.77■■■□□ 2.04
SSB-206ENST00000461708 CHIC2Q9UKJ5 165 aa27.76■■■□□ 2.03
SSB-206ENST00000461708 ARHGAP23Q9P227 1491 aa27.76■■■□□ 2.03
SSB-206ENST00000461708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.75■■■□□ 2.038e-7■■■□□ 17.7
SSB-206ENST00000461708 SLIT1O75093 1534 aa27.75■■■□□ 2.03
SSB-206ENST00000461708 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
SSB-206ENST00000461708 TOM1O60784 492 aa27.73■■■□□ 2.03
SSB-206ENST00000461708 KDM5AP29375 1690 aaKnown RBP27.71■■■□□ 2.03
SSB-206ENST00000461708 PIK3C2BO00750 1634 aa27.67■■■□□ 2.02
SSB-206ENST00000461708 LTKP29376 864 aa27.67■■■□□ 2.02
SSB-206ENST00000461708 FAM50AQ14320 339 aaKnown RBP27.67■■■□□ 2.02
SSB-206ENST00000461708 EFCAB6Q5THR3 1501 aa27.67■■■□□ 2.02
SSB-206ENST00000461708 TXNDC2Q86VQ3 553 aa27.66■■■□□ 2.02
SSB-206ENST00000461708 EID1Q9Y6B2 187 aa27.65■■■□□ 2.02
SSB-206ENST00000461708 STRCP1A6NGW2 1772 aa27.65■■■□□ 2.02
SSB-206ENST00000461708 ANKRD50Q9ULJ7 1429 aa27.65■■■□□ 2.02
SSB-206ENST00000461708 SYNMO15061 1565 aa27.65■■■□□ 2.02
SSB-206ENST00000461708 TMEM2Q9UHN6 1383 aa27.64■■■□□ 2.02
SSB-206ENST00000461708 NOS1P29475 1434 aa27.64■■■□□ 2.02
SSB-206ENST00000461708 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
SSB-206ENST00000461708 IDI1Q13907 227 aa27.61■■■□□ 2.01
SSB-206ENST00000461708 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
SSB-206ENST00000461708 STAG3Q9UJ98 1225 aa27.6■■■□□ 2.01
SSB-206ENST00000461708 ILDR2Q71H61 639 aa27.59■■■□□ 2.01
SSB-206ENST00000461708 SLC52A1Q9NWF4 448 aa27.59■■■□□ 2.01
SSB-206ENST00000461708 PIP4K2BP78356 416 aa27.58■■■□□ 2.01
SSB-206ENST00000461708 ALKQ9UM73 1620 aa27.58■■■□□ 2.01
SSB-206ENST00000461708 SCAF1Q9H7N4 1312 aaKnown RBP27.57■■■□□ 2
SSB-206ENST00000461708 HSPA1LP34931 641 aa27.56■■■□□ 2
SSB-206ENST00000461708 ROCK1Q13464 1354 aa27.55■■■□□ 2
SSB-206ENST00000461708 TET3O43151 1660 aa27.54■■■□□ 2
SSB-206ENST00000461708 ADGRB3O60242 1522 aa27.53■■■□□ 2
SSB-206ENST00000461708 UNC13BO14795 1591 aa27.52■■■□□ 2
SSB-206ENST00000461708 SOCS7O14512 581 aa27.49■■□□□ 1.99
SSB-206ENST00000461708 GCC2Q8IWJ2 1684 aa27.49■■□□□ 1.99
SSB-206ENST00000461708 XIRP1Q702N8 1843 aaKnown RBP27.45■■□□□ 1.98
SSB-206ENST00000461708 KCNA6P17658 529 aa27.43■■□□□ 1.98
SSB-206ENST00000461708 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
SSB-206ENST00000461708 ZFYVE9O95405 1425 aa27.41■■□□□ 1.98
SSB-206ENST00000461708 HDGFP51858 240 aaKnown RBP27.4■■□□□ 1.98
SSB-206ENST00000461708 MED1Q15648 1581 aaPredicted RBP27.39■■□□□ 1.98
SSB-206ENST00000461708 TMEM131LA2VDJ0 1609 aa27.39■■□□□ 1.98
SSB-206ENST00000461708 SLC26A8Q96RN1 970 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms