RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	GGT6	Q6P531	493 aa		19.98	■□□□□ 0.79
FDPS-204	ENST00000461507	PLA2R1	Q13018	1463 aa		19.98	■□□□□ 0.79
FDPS-204	ENST00000461507	CROCC2	H7BZ55	1655 aa		19.97	■□□□□ 0.79
FDPS-204	ENST00000461507	APLP2	Q06481	763 aa		19.96	■□□□□ 0.79
FDPS-204	ENST00000461507	ZC3H13	Q5T200	1668 aa	Known RBP	19.95	■□□□□ 0.78
FDPS-204	ENST00000461507	PZP	P20742	1482 aa		19.95	■□□□□ 0.78
FDPS-204	ENST00000461507	CERK	Q8TCT0	537 aa		19.95	■□□□□ 0.78
FDPS-204	ENST00000461507	SHANK2	Q9UPX8	1470 aa		19.94	■□□□□ 0.78
FDPS-204	ENST00000461507	TCOF1	Q13428	1488 aa	Known RBP	19.93	■□□□□ 0.78
FDPS-204	ENST00000461507	LTBP4	Q8N2S1	1624 aa		19.93	■□□□□ 0.78
FDPS-204	ENST00000461507	MROH1	Q8NDA8	1641 aa		19.93	■□□□□ 0.78
FDPS-204	ENST00000461507	A2ML1	A8K2U0	1454 aa		19.92	■□□□□ 0.78
FDPS-204	ENST00000461507	PTPN23	Q9H3S7	1636 aa		19.92	■□□□□ 0.78
FDPS-204	ENST00000461507	KIF3B	O15066	747 aa		19.92	■□□□□ 0.78
FDPS-204	ENST00000461507	TSPY4	P0CV99	314 aa		19.92	■□□□□ 0.78
FDPS-204	ENST00000461507	TSPY10	P0CW01	314 aa		19.92	■□□□□ 0.78
FDPS-204	ENST00000461507	DNMT1	P26358	1616 aa	Known RBP	19.91	■□□□□ 0.78
FDPS-204	ENST00000461507	ABCC3	O15438	1527 aa		19.89	■□□□□ 0.77
FDPS-204	ENST00000461507	DUOX2	Q9NRD8	1548 aa		19.89	■□□□□ 0.77
FDPS-204	ENST00000461507	IQSEC2	Q5JU85	1478 aa		19.87	■□□□□ 0.77
FDPS-204	ENST00000461507	FGD6	Q6ZV73	1430 aa		19.86	■□□□□ 0.77
FDPS-204	ENST00000461507	TNR	Q92752	1358 aa		19.86	■□□□□ 0.77
FDPS-204	ENST00000461507	POLR1A	O95602	1720 aa	Predicted RBP	19.86	■□□□□ 0.77
FDPS-204	ENST00000461507	ABCC5	O15440	1437 aa		19.85	■□□□□ 0.77
FDPS-204	ENST00000461507	SPATA31D1	Q6ZQQ2	1576 aa		19.85	■□□□□ 0.77
FDPS-204	ENST00000461507	PRDM15	P57071	1507 aa	Predicted RBP	19.85	■□□□□ 0.77
FDPS-204	ENST00000461507	NLRP1	Q9C000	1473 aa		19.84	■□□□□ 0.77
FDPS-204	ENST00000461507	DEPDC5	O75140	1603 aa		19.84	■□□□□ 0.77
FDPS-204	ENST00000461507	WASHC2C	Q9Y4E1	1318 aa		19.83	■□□□□ 0.77
FDPS-204	ENST00000461507	CEP152	O94986	1710 aa		19.83	■□□□□ 0.77
FDPS-204	ENST00000461507	PKD2	Q13563	968 aa		19.83	■□□□□ 0.77
FDPS-204	ENST00000461507	DAPK1	P53355	1430 aa		19.83	■□□□□ 0.76
FDPS-204	ENST00000461507	ERBIN	Q96RT1	1412 aa		19.83	■□□□□ 0.76
FDPS-204	ENST00000461507	NEURL4	Q96JN8	1562 aa		19.83	■□□□□ 0.76
FDPS-204	ENST00000461507	FBXO31	Q5XUX0	539 aa	Predicted RBP	19.8	■□□□□ 0.76
FDPS-204	ENST00000461507	KIF15	Q9NS87	1388 aa		19.8	■□□□□ 0.76
FDPS-204	ENST00000461507	NCKAP5L	Q9HCH0	1330 aa		19.79	■□□□□ 0.76
FDPS-204	ENST00000461507	ERVK-7	P63135	1459 aa		19.79	■□□□□ 0.76
FDPS-204	ENST00000461507	UGGT1	Q9NYU2	1555 aa		19.77	■□□□□ 0.76
FDPS-204	ENST00000461507	ARHGAP31	Q2M1Z3	1444 aa		19.76	■□□□□ 0.75
FDPS-204	ENST00000461507	ADGRL2	O95490	1459 aa		19.74	■□□□□ 0.75
FDPS-204	ENST00000461507	VWDE	Q8N2E2	1590 aa		19.74	■□□□□ 0.75
FDPS-204	ENST00000461507	MED14	O60244	1454 aa		19.73	■□□□□ 0.75
FDPS-204	ENST00000461507	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	19.72	■□□□□ 0.75
FDPS-204	ENST00000461507	LMTK2	Q8IWU2	1503 aa		19.71	■□□□□ 0.75
FDPS-204	ENST00000461507	UBR1	Q8IWV7	1749 aa		19.71	■□□□□ 0.75
FDPS-204	ENST00000461507	ANKRD30A	Q9BXX3	1397 aa		19.7	■□□□□ 0.74
FDPS-204	ENST00000461507	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	19.69	■□□□□ 0.74	3e-6	■□□□□ 10.4
FDPS-204	ENST00000461507	THEMIS	Q8N1K5	641 aa	Predicted RBP	19.68	■□□□□ 0.74
FDPS-204	ENST00000461507	IQGAP1	P46940	1657 aa		19.68	■□□□□ 0.74
FDPS-204	ENST00000461507	CPS1	P31327	1500 aa		19.67	■□□□□ 0.74
FDPS-204	ENST00000461507	CFAP65	Q6ZU64	1925 aa	Known RBP	19.67	■□□□□ 0.74
FDPS-204	ENST00000461507	KDM5A	P29375	1690 aa	Known RBP	19.66	■□□□□ 0.74
FDPS-204	ENST00000461507	RRP7BP	Q9NSQ0	103 aa		19.66	■□□□□ 0.74
FDPS-204	ENST00000461507	NPHP4	O75161	1426 aa	Predicted RBP	19.65	■□□□□ 0.74
FDPS-204	ENST00000461507	ANKLE2	Q86XL3	938 aa		19.64	■□□□□ 0.73
FDPS-204	ENST00000461507	PPARGC1B	Q86YN6	1023 aa	Known RBP	19.64	■□□□□ 0.73
FDPS-204	ENST00000461507	ARHGAP23	Q9P227	1491 aa		19.64	■□□□□ 0.73
FDPS-204	ENST00000461507	SLIT1	O75093	1534 aa		19.64	■□□□□ 0.73
FDPS-204	ENST00000461507	EFCAB6	Q5THR3	1501 aa		19.64	■□□□□ 0.73
FDPS-204	ENST00000461507	KANK1	Q14678	1352 aa		19.62	■□□□□ 0.73
FDPS-204	ENST00000461507	PIK3C2B	O00750	1634 aa		19.62	■□□□□ 0.73
FDPS-204	ENST00000461507	SYNM	O15061	1565 aa		19.6	■□□□□ 0.73
FDPS-204	ENST00000461507	UNC13B	O14795	1591 aa		19.58	■□□□□ 0.73
FDPS-204	ENST00000461507	STRCP1	A6NGW2	1772 aa		19.58	■□□□□ 0.73
FDPS-204	ENST00000461507	CHIC2	Q9UKJ5	165 aa		19.58	■□□□□ 0.72
FDPS-204	ENST00000461507	SCAF11	Q99590	1463 aa	Known RBP	19.58	■□□□□ 0.72
FDPS-204	ENST00000461507	NOS1	P29475	1434 aa		19.58	■□□□□ 0.72
FDPS-204	ENST00000461507	ANKRD50	Q9ULJ7	1429 aa		19.58	■□□□□ 0.72
FDPS-204	ENST00000461507	TET3	O43151	1660 aa		19.57	■□□□□ 0.72
FDPS-204	ENST00000461507	RPRD2	Q5VT52	1461 aa	Known RBP	19.56	■□□□□ 0.72
FDPS-204	ENST00000461507	GCC2	Q8IWJ2	1684 aa		19.55	■□□□□ 0.72
FDPS-204	ENST00000461507	FAM50A	Q14320	339 aa	Known RBP	19.54	■□□□□ 0.72
FDPS-204	ENST00000461507	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	19.54	■□□□□ 0.72	1e-9	■□□□□ 9.9
FDPS-204	ENST00000461507	ROCK1	Q13464	1354 aa		19.54	■□□□□ 0.72
FDPS-204	ENST00000461507	ADGRB3	O60242	1522 aa		19.53	■□□□□ 0.72
FDPS-204	ENST00000461507	ALK	Q9UM73	1620 aa		19.52	■□□□□ 0.72
FDPS-204	ENST00000461507	UBAP1L	F5GYI3	381 aa		19.51	■□□□□ 0.71
FDPS-204	ENST00000461507	TMEM2	Q9UHN6	1383 aa		19.51	■□□□□ 0.71
FDPS-204	ENST00000461507	IQGAP3	Q86VI3	1631 aa		19.49	■□□□□ 0.71
FDPS-204	ENST00000461507	LRRC7	Q96NW7	1537 aa		19.49	■□□□□ 0.71
FDPS-204	ENST00000461507	LTK	P29376	864 aa		19.48	■□□□□ 0.71
FDPS-204	ENST00000461507		E9PCH4	1651 aa		19.46	■□□□□ 0.71
FDPS-204	ENST00000461507	IDI1	Q13907	227 aa		19.45	■□□□□ 0.7
FDPS-204	ENST00000461507	XIRP1	Q702N8	1843 aa	Known RBP	19.44	■□□□□ 0.7
FDPS-204	ENST00000461507	TXNDC2	Q86VQ3	553 aa		19.44	■□□□□ 0.7
FDPS-204	ENST00000461507	MYO5B	Q9ULV0	1848 aa		19.44	■□□□□ 0.7
FDPS-204	ENST00000461507	SLC52A1	Q9NWF4	448 aa		19.43	■□□□□ 0.7
FDPS-204	ENST00000461507	TMEM131L	A2VDJ0	1609 aa		19.43	■□□□□ 0.7
FDPS-204	ENST00000461507	EID1	Q9Y6B2	187 aa		19.42	■□□□□ 0.7
FDPS-204	ENST00000461507	TOM1	O60784	492 aa		19.41	■□□□□ 0.7
FDPS-204	ENST00000461507	ZFYVE9	O95405	1425 aa		19.41	■□□□□ 0.7
FDPS-204	ENST00000461507	NWD1	Q149M9	1564 aa		19.4	■□□□□ 0.7
FDPS-204	ENST00000461507	DISP3	Q9P2K9	1392 aa		19.4	■□□□□ 0.7
FDPS-204	ENST00000461507	RRBP1	Q9P2E9	1410 aa	Known RBP	19.4	■□□□□ 0.7
FDPS-204	ENST00000461507	ITGAE	P38570	1179 aa		19.39	■□□□□ 0.69
FDPS-204	ENST00000461507	STAG3	Q9UJ98	1225 aa		19.38	■□□□□ 0.69
FDPS-204	ENST00000461507	NKTR	P30414	1462 aa	Known RBP	19.35	■□□□□ 0.69
FDPS-204	ENST00000461507	PLEKHG1	Q9ULL1	1385 aa		19.32	■□□□□ 0.68
FDPS-204	ENST00000461507	SPHKAP	Q2M3C7	1700 aa		19.32	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms