RNA–Protein interactions for RNA: ENST00000455878.2

PSMC4-202, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 1 (best) BASIC

Gene PSMC4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-202ENST00000455878 CCDC141Q6ZP82 1450 aa21.11■□□□□ 0.97
PSMC4-202ENST00000455878 THEMISQ8N1K5 641 aaPredicted RBP21.1■□□□□ 0.97
PSMC4-202ENST00000455878 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
PSMC4-202ENST00000455878 TNRQ92752 1358 aa21.09■□□□□ 0.97
PSMC4-202ENST00000455878 A2ML1A8K2U0 1454 aa21.09■□□□□ 0.97
PSMC4-202ENST00000455878 TCOF1Q13428 1488 aaKnown RBP21.09■□□□□ 0.97
PSMC4-202ENST00000455878 ANKLE2Q86XL3 938 aa21.08■□□□□ 0.97
PSMC4-202ENST00000455878 SOCS7O14512 581 aa21.07■□□□□ 0.96
PSMC4-202ENST00000455878 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
PSMC4-202ENST00000455878 ZNF142P52746 1687 aaPredicted RBP21.06■□□□□ 0.96
PSMC4-202ENST00000455878 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
PSMC4-202ENST00000455878 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
PSMC4-202ENST00000455878 MIA2Q96PC5 1412 aa21.02■□□□□ 0.95
PSMC4-202ENST00000455878 TOM1O60784 492 aa21.02■□□□□ 0.95
PSMC4-202ENST00000455878 PZPP20742 1482 aa21.01■□□□□ 0.95
PSMC4-202ENST00000455878 KDM5DQ9BY66 1539 aa21.01■□□□□ 0.95
PSMC4-202ENST00000455878 PIP4K2BP78356 416 aa21■□□□□ 0.95
PSMC4-202ENST00000455878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
PSMC4-202ENST00000455878 FAM135AQ9P2D6 1515 aa20.98■□□□□ 0.95
PSMC4-202ENST00000455878 SPATA31D1Q6ZQQ2 1576 aa20.97■□□□□ 0.95
PSMC4-202ENST00000455878 LRRC9Q6ZRR7 1453 aa20.97■□□□□ 0.95
PSMC4-202ENST00000455878 KANK4Q5T7N3 995 aaPredicted RBP20.97■□□□□ 0.95
PSMC4-202ENST00000455878 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
PSMC4-202ENST00000455878 ARHGEF5Q12774 1597 aa20.96■□□□□ 0.95
PSMC4-202ENST00000455878 APLP2Q06481 763 aa20.96■□□□□ 0.95
PSMC4-202ENST00000455878 NLRP1Q9C000 1473 aa20.95■□□□□ 0.94
PSMC4-202ENST00000455878 SHANK2Q9UPX8 1470 aa20.94■□□□□ 0.94
PSMC4-202ENST00000455878 CPS1P31327 1500 aa20.92■□□□□ 0.94
PSMC4-202ENST00000455878 UGGT1Q9NYU2 1555 aa20.92■□□□□ 0.94
PSMC4-202ENST00000455878 HSPA1LP34931 641 aa20.91■□□□□ 0.94
PSMC4-202ENST00000455878 NPHP4O75161 1426 aaPredicted RBP20.9■□□□□ 0.94
PSMC4-202ENST00000455878 MYOM3Q5VTT5 1437 aa20.89■□□□□ 0.93
PSMC4-202ENST00000455878 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
PSMC4-202ENST00000455878 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
PSMC4-202ENST00000455878 MAP3K1Q13233 1512 aa20.86■□□□□ 0.93
PSMC4-202ENST00000455878 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
PSMC4-202ENST00000455878 MED14O60244 1454 aa20.85■□□□□ 0.93
PSMC4-202ENST00000455878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.932e-6■■■□□ 19.1
PSMC4-202ENST00000455878 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
PSMC4-202ENST00000455878 ABCC3O15438 1527 aa20.84■□□□□ 0.93
PSMC4-202ENST00000455878 TXNDC2Q86VQ3 553 aa20.82■□□□□ 0.92
PSMC4-202ENST00000455878 STAG3Q9UJ98 1225 aa20.82■□□□□ 0.92
PSMC4-202ENST00000455878 EID1Q9Y6B2 187 aa20.82■□□□□ 0.92
PSMC4-202ENST00000455878 DEPDC5O75140 1603 aa20.81■□□□□ 0.92
PSMC4-202ENST00000455878 RNF17Q9BXT8 1623 aaKnown RBP20.81■□□□□ 0.92
PSMC4-202ENST00000455878 DUOX2Q9NRD8 1548 aa20.8■□□□□ 0.92
PSMC4-202ENST00000455878 ERVK-7P63135 1459 aa20.8■□□□□ 0.92
PSMC4-202ENST00000455878 KIF15Q9NS87 1388 aa20.8■□□□□ 0.92
PSMC4-202ENST00000455878 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
PSMC4-202ENST00000455878 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
PSMC4-202ENST00000455878 VWDEQ8N2E2 1590 aa20.79■□□□□ 0.92
PSMC4-202ENST00000455878 ZC3H13Q5T200 1668 aaKnown RBP20.79■□□□□ 0.92
PSMC4-202ENST00000455878 KANK1Q14678 1352 aa20.78■□□□□ 0.92
PSMC4-202ENST00000455878 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
PSMC4-202ENST00000455878 LTKP29376 864 aa20.77■□□□□ 0.91
PSMC4-202ENST00000455878 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.91
PSMC4-202ENST00000455878 IQGAP1P46940 1657 aa20.76■□□□□ 0.91
PSMC4-202ENST00000455878 CHIC2Q9UKJ5 165 aa20.76■□□□□ 0.91
PSMC4-202ENST00000455878 ABCC5O15440 1437 aa20.75■□□□□ 0.91
PSMC4-202ENST00000455878 ARHGAP31Q2M1Z3 1444 aa20.73■□□□□ 0.91
PSMC4-202ENST00000455878 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
PSMC4-202ENST00000455878 SCAF11Q99590 1463 aaKnown RBP20.72■□□□□ 0.91
PSMC4-202ENST00000455878 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
PSMC4-202ENST00000455878 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
PSMC4-202ENST00000455878 CEP152O94986 1710 aa20.7■□□□□ 0.9
PSMC4-202ENST00000455878 MROH1Q8NDA8 1641 aa20.7■□□□□ 0.9
PSMC4-202ENST00000455878 DAPK1P53355 1430 aa20.69■□□□□ 0.9
PSMC4-202ENST00000455878 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
PSMC4-202ENST00000455878 IDI1Q13907 227 aa20.68■□□□□ 0.9
PSMC4-202ENST00000455878 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
PSMC4-202ENST00000455878 BCANQ96GW7 911 aa20.67■□□□□ 0.9
PSMC4-202ENST00000455878 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
PSMC4-202ENST00000455878 FGD6Q6ZV73 1430 aa20.65■□□□□ 0.9
PSMC4-202ENST00000455878 MED1Q15648 1581 aaPredicted RBP20.65■□□□□ 0.9
PSMC4-202ENST00000455878 ARHGAP23Q9P227 1491 aa20.65■□□□□ 0.9
PSMC4-202ENST00000455878 SLIT1O75093 1534 aa20.64■□□□□ 0.9
PSMC4-202ENST00000455878 PRDM15P57071 1507 aaPredicted RBP20.64■□□□□ 0.9
PSMC4-202ENST00000455878 FAM50AQ14320 339 aaKnown RBP20.64■□□□□ 0.89
PSMC4-202ENST00000455878 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
PSMC4-202ENST00000455878 STRCP1A6NGW2 1772 aa20.63■□□□□ 0.89
PSMC4-202ENST00000455878 KCNA6P17658 529 aa20.62■□□□□ 0.89
PSMC4-202ENST00000455878 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
PSMC4-202ENST00000455878 SLC26A8Q96RN1 970 aa20.61■□□□□ 0.89
PSMC4-202ENST00000455878 SYNMO15061 1565 aa20.6■□□□□ 0.89
PSMC4-202ENST00000455878 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
PSMC4-202ENST00000455878 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
PSMC4-202ENST00000455878 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
PSMC4-202ENST00000455878 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
PSMC4-202ENST00000455878 EFCAB6Q5THR3 1501 aa20.57■□□□□ 0.88
PSMC4-202ENST00000455878 LMTK2Q8IWU2 1503 aa20.56■□□□□ 0.88
PSMC4-202ENST00000455878 TMEM94Q12767 1356 aa20.55■□□□□ 0.88
PSMC4-202ENST00000455878 PPP1R15AO75807 674 aaPredicted RBP20.54■□□□□ 0.88
PSMC4-202ENST00000455878 RBM33Q96EV2 1170 aaKnown RBP20.53■□□□□ 0.88
PSMC4-202ENST00000455878 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
PSMC4-202ENST00000455878 NOS1P29475 1434 aa20.52■□□□□ 0.87
PSMC4-202ENST00000455878 ANKRD50Q9ULJ7 1429 aa20.52■□□□□ 0.87
PSMC4-202ENST00000455878 CHGAP10645 457 aaKnown RBP20.51■□□□□ 0.87
PSMC4-202ENST00000455878 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
PSMC4-202ENST00000455878 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
PSMC4-202ENST00000455878 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms