RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 FAM135AQ9P2D6 1515 aa18.76■□□□□ 0.59
PDGFB-204ENST00000455790 APLP2Q06481 763 aa18.76■□□□□ 0.59
PDGFB-204ENST00000455790 PTPRTO14522 1441 aa18.75■□□□□ 0.59
PDGFB-204ENST00000455790 RNF17Q9BXT8 1623 aaKnown RBP18.75■□□□□ 0.59
PDGFB-204ENST00000455790 FGD6Q6ZV73 1430 aa18.74■□□□□ 0.59
PDGFB-204ENST00000455790 CROCC2H7BZ55 1655 aa18.74■□□□□ 0.59
PDGFB-204ENST00000455790 PZPP20742 1482 aa18.74■□□□□ 0.59
PDGFB-204ENST00000455790 CERKQ8TCT0 537 aa18.74■□□□□ 0.59
PDGFB-204ENST00000455790 ABCC5O15440 1437 aa18.74■□□□□ 0.59
PDGFB-204ENST00000455790 FBXO31Q5XUX0 539 aaPredicted RBP18.73■□□□□ 0.59
PDGFB-204ENST00000455790 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
PDGFB-204ENST00000455790 MROH1Q8NDA8 1641 aa18.73■□□□□ 0.59
PDGFB-204ENST00000455790 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
PDGFB-204ENST00000455790 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
PDGFB-204ENST00000455790 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
PDGFB-204ENST00000455790 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
PDGFB-204ENST00000455790 ABCC3O15438 1527 aa18.71■□□□□ 0.59
PDGFB-204ENST00000455790 TNRQ92752 1358 aa18.7■□□□□ 0.58
PDGFB-204ENST00000455790 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
PDGFB-204ENST00000455790 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
PDGFB-204ENST00000455790 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
PDGFB-204ENST00000455790 NCKAP5LQ9HCH0 1330 aa18.7■□□□□ 0.58
PDGFB-204ENST00000455790 DUOX2Q9NRD8 1548 aa18.69■□□□□ 0.58
PDGFB-204ENST00000455790 DAPK1P53355 1430 aa18.69■□□□□ 0.58
PDGFB-204ENST00000455790 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
PDGFB-204ENST00000455790 LTBP4Q8N2S1 1624 aa18.67■□□□□ 0.58
PDGFB-204ENST00000455790 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
PDGFB-204ENST00000455790 CEP152O94986 1710 aa18.64■□□□□ 0.57
PDGFB-204ENST00000455790 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
PDGFB-204ENST00000455790 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
PDGFB-204ENST00000455790 PRDM15P57071 1507 aaPredicted RBP18.63■□□□□ 0.57
PDGFB-204ENST00000455790 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
PDGFB-204ENST00000455790 ERVK-7P63135 1459 aa18.61■□□□□ 0.57
PDGFB-204ENST00000455790 PKD2Q13563 968 aa18.61■□□□□ 0.57
PDGFB-204ENST00000455790 CHIC2Q9UKJ5 165 aa18.61■□□□□ 0.57
PDGFB-204ENST00000455790 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
PDGFB-204ENST00000455790 NLRP1Q9C000 1473 aa18.6■□□□□ 0.57
PDGFB-204ENST00000455790 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
PDGFB-204ENST00000455790 DEPDC5O75140 1603 aa18.59■□□□□ 0.57
PDGFB-204ENST00000455790 UGGT1Q9NYU2 1555 aa18.58■□□□□ 0.56
PDGFB-204ENST00000455790 POLR1AO95602 1720 aaPredicted RBP18.57■□□□□ 0.56
PDGFB-204ENST00000455790 ANKRD30AQ9BXX3 1397 aa18.57■□□□□ 0.56
PDGFB-204ENST00000455790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDGFB-204ENST00000455790 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
PDGFB-204ENST00000455790 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
PDGFB-204ENST00000455790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.56
PDGFB-204ENST00000455790 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
PDGFB-204ENST00000455790 ARHGAP31Q2M1Z3 1444 aa18.52■□□□□ 0.56
PDGFB-204ENST00000455790 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
PDGFB-204ENST00000455790 THEMISQ8N1K5 641 aaPredicted RBP18.5■□□□□ 0.55
PDGFB-204ENST00000455790 LMTK2Q8IWU2 1503 aa18.49■□□□□ 0.55
PDGFB-204ENST00000455790 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
PDGFB-204ENST00000455790 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
PDGFB-204ENST00000455790 KANK1Q14678 1352 aa18.48■□□□□ 0.55
PDGFB-204ENST00000455790 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
PDGFB-204ENST00000455790 PPARGC1BQ86YN6 1023 aaKnown RBP18.48■□□□□ 0.55
PDGFB-204ENST00000455790 NPHP4O75161 1426 aaPredicted RBP18.48■□□□□ 0.55
PDGFB-204ENST00000455790 MED14O60244 1454 aa18.47■□□□□ 0.55
PDGFB-204ENST00000455790 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
PDGFB-204ENST00000455790 ANKRD50Q9ULJ7 1429 aa18.46■□□□□ 0.55
PDGFB-204ENST00000455790 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
PDGFB-204ENST00000455790 SYNMO15061 1565 aa18.44■□□□□ 0.54
PDGFB-204ENST00000455790 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
PDGFB-204ENST00000455790 ARHGAP23Q9P227 1491 aa18.42■□□□□ 0.54
PDGFB-204ENST00000455790 SCAF11Q99590 1463 aaKnown RBP18.41■□□□□ 0.54
PDGFB-204ENST00000455790 SLIT1O75093 1534 aa18.41■□□□□ 0.54
PDGFB-204ENST00000455790 CPS1P31327 1500 aa18.41■□□□□ 0.54
PDGFB-204ENST00000455790 NOS1P29475 1434 aa18.4■□□□□ 0.54
PDGFB-204ENST00000455790 UNC13BO14795 1591 aa18.4■□□□□ 0.54
PDGFB-204ENST00000455790 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
PDGFB-204ENST00000455790 LTKP29376 864 aa18.39■□□□□ 0.53
PDGFB-204ENST00000455790 ROCK1Q13464 1354 aa18.38■□□□□ 0.53
PDGFB-204ENST00000455790 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
PDGFB-204ENST00000455790 IDI1Q13907 227 aa18.37■□□□□ 0.53
PDGFB-204ENST00000455790 TET3O43151 1660 aa18.37■□□□□ 0.53
PDGFB-204ENST00000455790 ITGAEP38570 1179 aa18.36■□□□□ 0.53
PDGFB-204ENST00000455790 TMEM2Q9UHN6 1383 aa18.36■□□□□ 0.53
PDGFB-204ENST00000455790 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
PDGFB-204ENST00000455790 KDM5AP29375 1690 aaKnown RBP18.34■□□□□ 0.53
PDGFB-204ENST00000455790 RPRD2Q5VT52 1461 aaKnown RBP18.34■□□□□ 0.53
PDGFB-204ENST00000455790 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
PDGFB-204ENST00000455790 GCC2Q8IWJ2 1684 aa18.32■□□□□ 0.52
PDGFB-204ENST00000455790 ALKQ9UM73 1620 aa18.31■□□□□ 0.52
PDGFB-204ENST00000455790 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
PDGFB-204ENST00000455790 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
PDGFB-204ENST00000455790 IQGAP3Q86VI3 1631 aa18.31■□□□□ 0.52
PDGFB-204ENST00000455790 E9PCH4 1651 aa18.3■□□□□ 0.52
PDGFB-204ENST00000455790 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
PDGFB-204ENST00000455790 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
PDGFB-204ENST00000455790 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
PDGFB-204ENST00000455790 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
PDGFB-204ENST00000455790 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
PDGFB-204ENST00000455790 NUP155O75694 1391 aa18.25■□□□□ 0.51
PDGFB-204ENST00000455790 MYO5BQ9ULV0 1848 aa18.25■□□□□ 0.51
PDGFB-204ENST00000455790 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
PDGFB-204ENST00000455790 TMEM131LA2VDJ0 1609 aa18.24■□□□□ 0.51
PDGFB-204ENST00000455790 DISP3Q9P2K9 1392 aa18.24■□□□□ 0.51
PDGFB-204ENST00000455790 TOM1O60784 492 aa18.23■□□□□ 0.51
PDGFB-204ENST00000455790 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
PDGFB-204ENST00000455790 SENP3Q9H4L4 574 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms