RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 TNRQ92752 1358 aa37.62■■■■□ 3.61
PTPRA-208ENST00000455631 CPS1P31327 1500 aa37.61■■■■□ 3.61
PTPRA-208ENST00000455631 DHX29Q7Z478 1369 aaKnown RBP37.61■■■■□ 3.61
PTPRA-208ENST00000455631 PIP4K2BP78356 416 aa37.59■■■■□ 3.61
PTPRA-208ENST00000455631 KDM5DQ9BY66 1539 aa37.59■■■■□ 3.61
PTPRA-208ENST00000455631 MED1Q15648 1581 aaPredicted RBP37.58■■■■□ 3.61
PTPRA-208ENST00000455631 HSPA1LP34931 641 aa37.57■■■■□ 3.6
PTPRA-208ENST00000455631 FBXO31Q5XUX0 539 aaPredicted RBP37.57■■■■□ 3.6
PTPRA-208ENST00000455631 PZPP20742 1482 aa37.57■■■■□ 3.6
PTPRA-208ENST00000455631 SHANK2Q9UPX8 1470 aa37.56■■■■□ 3.6
PTPRA-208ENST00000455631 KIF3BO15066 747 aa37.55■■■■□ 3.6
PTPRA-208ENST00000455631 TOM1O60784 492 aa37.54■■■■□ 3.6
PTPRA-208ENST00000455631 FAM135AQ9P2D6 1515 aa37.54■■■■□ 3.6
PTPRA-208ENST00000455631 CEP162Q5TB80 1403 aa37.53■■■■□ 3.6
PTPRA-208ENST00000455631 CCDC141Q6ZP82 1450 aa37.52■■■■□ 3.6
PTPRA-208ENST00000455631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.48■■■■□ 3.59
PTPRA-208ENST00000455631 WASHC2CQ9Y4E1 1318 aa37.47■■■■□ 3.59
PTPRA-208ENST00000455631 ANKLE2Q86XL3 938 aa37.46■■■■□ 3.59
PTPRA-208ENST00000455631 VWDEQ8N2E2 1590 aa37.46■■■■□ 3.59
PTPRA-208ENST00000455631 CAMSAP2Q08AD1 1489 aa37.45■■■■□ 3.59
PTPRA-208ENST00000455631 UGGT1Q9NYU2 1555 aa37.43■■■■□ 3.58
PTPRA-208ENST00000455631 NLRP1Q9C000 1473 aa37.43■■■■□ 3.58
PTPRA-208ENST00000455631 MIA2Q96PC5 1412 aa37.41■■■■□ 3.58
PTPRA-208ENST00000455631 NPHP4O75161 1426 aaPredicted RBP37.4■■■■□ 3.58
PTPRA-208ENST00000455631 THEMISQ8N1K5 641 aaPredicted RBP37.4■■■■□ 3.58
PTPRA-208ENST00000455631 DEPDC5O75140 1603 aa37.39■■■■□ 3.58
PTPRA-208ENST00000455631 NCOA2Q15596 1464 aa37.38■■■■□ 3.57
PTPRA-208ENST00000455631 MED14O60244 1454 aa37.36■■■■□ 3.57
PTPRA-208ENST00000455631 IQGAP1P46940 1657 aa37.36■■■■□ 3.57
PTPRA-208ENST00000455631 RSPH4AQ5TD94 716 aa37.34■■■■□ 3.57
PTPRA-208ENST00000455631 ALKQ9UM73 1620 aa37.34■■■■□ 3.57
PTPRA-208ENST00000455631 ARHGEF5Q12774 1597 aa37.31■■■■□ 3.56
PTPRA-208ENST00000455631 PHF23Q9BUL5 403 aaPredicted RBP37.3■■■■□ 3.56
PTPRA-208ENST00000455631 RNF17Q9BXT8 1623 aaKnown RBP37.26■■■■□ 3.56
PTPRA-208ENST00000455631 STRCP1A6NGW2 1772 aa37.26■■■■□ 3.56
PTPRA-208ENST00000455631 ZC3H13Q5T200 1668 aaKnown RBP37.25■■■■□ 3.55
PTPRA-208ENST00000455631 TSPY4P0CV99 314 aa37.24■■■■□ 3.55
PTPRA-208ENST00000455631 TSPY10P0CW01 314 aa37.24■■■■□ 3.55
PTPRA-208ENST00000455631 ABCC3O15438 1527 aa37.24■■■■□ 3.55
PTPRA-208ENST00000455631 SYNMO15061 1565 aa37.22■■■■□ 3.55
PTPRA-208ENST00000455631 SENP3Q9H4L4 574 aaPredicted RBP37.22■■■■□ 3.55
PTPRA-208ENST00000455631 LRRC7Q96NW7 1537 aa37.2■■■■□ 3.55
PTPRA-208ENST00000455631 ERVK-7P63135 1459 aa37.18■■■■□ 3.54
PTPRA-208ENST00000455631 EIF2AK4Q9P2K8 1649 aaKnown RBP37.15■■■■□ 3.54
PTPRA-208ENST00000455631 MAST1Q9Y2H9 1570 aa37.14■■■■□ 3.54
PTPRA-208ENST00000455631 CEP152O94986 1710 aa37.12■■■■□ 3.53
PTPRA-208ENST00000455631 UBR1Q8IWV7 1749 aa37.11■■■■□ 3.53
PTPRA-208ENST00000455631 MROH1Q8NDA8 1641 aa37.1■■■■□ 3.53
PTPRA-208ENST00000455631 CFAP65Q6ZU64 1925 aaKnown RBP37.08■■■■□ 3.53
PTPRA-208ENST00000455631 SCAF11Q99590 1463 aaKnown RBP37.06■■■■□ 3.52
PTPRA-208ENST00000455631 LRRC9Q6ZRR7 1453 aa37.02■■■■□ 3.52
PTPRA-208ENST00000455631 SLIT1O75093 1534 aa36.95■■■■□ 3.51
PTPRA-208ENST00000455631 DUOX2Q9NRD8 1548 aa36.95■■■■□ 3.51
PTPRA-208ENST00000455631 ARHGAP23Q9P227 1491 aa36.95■■■■□ 3.51
PTPRA-208ENST00000455631 XIRP1Q702N8 1843 aaKnown RBP36.94■■■■□ 3.5
PTPRA-208ENST00000455631 LTKP29376 864 aa36.93■■■■□ 3.5
PTPRA-208ENST00000455631 TXNDC2Q86VQ3 553 aa36.93■■■■□ 3.5
PTPRA-208ENST00000455631 PRDM15P57071 1507 aaPredicted RBP36.9■■■■□ 3.5
PTPRA-208ENST00000455631 VPS8Q8N3P4 1428 aa36.89■■■■□ 3.5
PTPRA-208ENST00000455631 MYOM3Q5VTT5 1437 aa36.88■■■■□ 3.49
PTPRA-208ENST00000455631 ARHGAP31Q2M1Z3 1444 aa36.86■■■■□ 3.49
PTPRA-208ENST00000455631 EID1Q9Y6B2 187 aa36.86■■■■□ 3.49
PTPRA-208ENST00000455631 PIK3C2BO00750 1634 aa36.85■■■■□ 3.49
PTPRA-208ENST00000455631 RGS17Q9UGC6 210 aaPredicted RBP36.85■■■■□ 3.49
PTPRA-208ENST00000455631 KIF15Q9NS87 1388 aa36.83■■■■□ 3.49
PTPRA-208ENST00000455631 KANK4Q5T7N3 995 aaPredicted RBP36.82■■■■□ 3.48
PTPRA-208ENST00000455631 CROCC2H7BZ55 1655 aa36.81■■■■□ 3.48
PTPRA-208ENST00000455631 ERBINQ96RT1 1412 aa36.8■■■■□ 3.48
PTPRA-208ENST00000455631 TMEM2Q9UHN6 1383 aa36.78■■■■□ 3.48
PTPRA-208ENST00000455631 STAG3Q9UJ98 1225 aa36.77■■■■□ 3.48
PTPRA-208ENST00000455631 MAP3K1Q13233 1512 aa36.76■■■■□ 3.48
PTPRA-208ENST00000455631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.76■■■■□ 3.483e-7■□□□□ 9.6
PTPRA-208ENST00000455631 FAM135BQ49AJ0 1406 aa36.76■■■■□ 3.47
PTPRA-208ENST00000455631 RRP7BPQ9NSQ0 103 aa36.74■■■■□ 3.47
PTPRA-208ENST00000455631 TMEM94Q12767 1356 aa36.73■■■■□ 3.47
PTPRA-208ENST00000455631 EFCAB6Q5THR3 1501 aa36.73■■■■□ 3.47
PTPRA-208ENST00000455631 KDM5AP29375 1690 aaKnown RBP36.71■■■■□ 3.47
PTPRA-208ENST00000455631 ROBO1Q9Y6N7 1651 aa36.7■■■■□ 3.47
PTPRA-208ENST00000455631 ABCC5O15440 1437 aa36.7■■■■□ 3.47
PTPRA-208ENST00000455631 KANK1Q14678 1352 aa36.69■■■■□ 3.46
PTPRA-208ENST00000455631 PTPN23Q9H3S7 1636 aa36.67■■■■□ 3.46
PTPRA-208ENST00000455631 KCNA6P17658 529 aa36.64■■■■□ 3.46
PTPRA-208ENST00000455631 DAPK1P53355 1430 aa36.62■■■■□ 3.45
PTPRA-208ENST00000455631 IDI1Q13907 227 aa36.62■■■■□ 3.45
PTPRA-208ENST00000455631 POTEAQ6S8J7 498 aa36.62■■■■□ 3.45
PTPRA-208ENST00000455631 SLC26A8Q96RN1 970 aa36.62■■■■□ 3.45
PTPRA-208ENST00000455631 TET3O43151 1660 aa36.61■■■■□ 3.45
PTPRA-208ENST00000455631 PROSER2Q86WR7 435 aaPredicted RBP36.61■■■■□ 3.45
PTPRA-208ENST00000455631 RBM33Q96EV2 1170 aaKnown RBP36.61■■■■□ 3.45
PTPRA-208ENST00000455631 LMTK2Q8IWU2 1503 aa36.6■■■■□ 3.45
PTPRA-208ENST00000455631 ADGRB3O60242 1522 aa36.58■■■■□ 3.45
PTPRA-208ENST00000455631 NWD1Q149M9 1564 aa36.57■■■■□ 3.45
PTPRA-208ENST00000455631 NKTRP30414 1462 aaKnown RBP36.57■■■■□ 3.45
PTPRA-208ENST00000455631 LOC105371045A0A1W2PR82 267 aa36.53■■■■□ 3.44
PTPRA-208ENST00000455631 MSH6P52701 1360 aa36.51■■■■□ 3.43
PTPRA-208ENST00000455631 ANKRD30AQ9BXX3 1397 aa36.51■■■■□ 3.43
PTPRA-208ENST00000455631 PHLPP1O60346 1717 aa36.51■■■■□ 3.43
PTPRA-208ENST00000455631 NOS1P29475 1434 aa36.51■■■■□ 3.43
PTPRA-208ENST00000455631 BCANQ96GW7 911 aa36.5■■■■□ 3.43
PTPRA-208ENST00000455631 CHIC2Q9UKJ5 165 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms