RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
UBE2D4-208ENST00000454350 TSPY4P0CV99 314 aa29.25■■■□□ 2.27
UBE2D4-208ENST00000454350 TSPY10P0CW01 314 aa29.25■■■□□ 2.27
UBE2D4-208ENST00000454350 RNF17Q9BXT8 1623 aaKnown RBP29.23■■■□□ 2.27
UBE2D4-208ENST00000454350 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.27
UBE2D4-208ENST00000454350 PZPP20742 1482 aa29.2■■■□□ 2.26
UBE2D4-208ENST00000454350 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.26
UBE2D4-208ENST00000454350 CROCC2H7BZ55 1655 aa29.19■■■□□ 2.26
UBE2D4-208ENST00000454350 PLA2R1Q13018 1463 aa29.19■■■□□ 2.26
UBE2D4-208ENST00000454350 DNMT1P26358 1616 aaKnown RBP29.19■■■□□ 2.26
UBE2D4-208ENST00000454350 PTPN23Q9H3S7 1636 aa29.18■■■□□ 2.26
UBE2D4-208ENST00000454350 TCOF1Q13428 1488 aaKnown RBP29.17■■■□□ 2.26
UBE2D4-208ENST00000454350 MROH1Q8NDA8 1641 aa29.17■■■□□ 2.26
UBE2D4-208ENST00000454350 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
UBE2D4-208ENST00000454350 FBXO31Q5XUX0 539 aaPredicted RBP29.16■■■□□ 2.26
UBE2D4-208ENST00000454350 NCKAP5LQ9HCH0 1330 aa29.15■■■□□ 2.26
UBE2D4-208ENST00000454350 WASHC2CQ9Y4E1 1318 aa29.14■■■□□ 2.25
UBE2D4-208ENST00000454350 ZC3H13Q5T200 1668 aaKnown RBP29.13■■■□□ 2.25
UBE2D4-208ENST00000454350 ABCC5O15440 1437 aa29.12■■■□□ 2.25
UBE2D4-208ENST00000454350 ABCC3O15438 1527 aa29.12■■■□□ 2.25
UBE2D4-208ENST00000454350 TNRQ92752 1358 aa29.11■■■□□ 2.25
UBE2D4-208ENST00000454350 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
UBE2D4-208ENST00000454350 DUOX2Q9NRD8 1548 aa29.1■■■□□ 2.25
UBE2D4-208ENST00000454350 FGD6Q6ZV73 1430 aa29.09■■■□□ 2.25
UBE2D4-208ENST00000454350 CEP152O94986 1710 aa29.08■■■□□ 2.25
UBE2D4-208ENST00000454350 APLP2Q06481 763 aa29.08■■■□□ 2.25
UBE2D4-208ENST00000454350 PKD2Q13563 968 aa29.08■■■□□ 2.25
UBE2D4-208ENST00000454350 POLR1AO95602 1720 aaPredicted RBP29.07■■■□□ 2.24
UBE2D4-208ENST00000454350 CFAP65Q6ZU64 1925 aaKnown RBP29.05■■■□□ 2.24
UBE2D4-208ENST00000454350 DAPK1P53355 1430 aa29.04■■■□□ 2.24
UBE2D4-208ENST00000454350 SPATA31D1Q6ZQQ2 1576 aa29.03■■■□□ 2.24
UBE2D4-208ENST00000454350 NEURL4Q96JN8 1562 aa29.03■■■□□ 2.24
UBE2D4-208ENST00000454350 KIF15Q9NS87 1388 aa29.01■■■□□ 2.24
UBE2D4-208ENST00000454350 IQSEC2Q5JU85 1478 aa29.01■■■□□ 2.23
UBE2D4-208ENST00000454350 NLRP1Q9C000 1473 aa29.01■■■□□ 2.23
UBE2D4-208ENST00000454350 PRDM15P57071 1507 aaPredicted RBP29■■■□□ 2.23
UBE2D4-208ENST00000454350 ZNF335Q9H4Z2 1342 aaPredicted RBP28.99■■■□□ 2.23
UBE2D4-208ENST00000454350 DEPDC5O75140 1603 aa28.99■■■□□ 2.23
UBE2D4-208ENST00000454350 ERBINQ96RT1 1412 aa28.98■■■□□ 2.23
UBE2D4-208ENST00000454350 ERVK-7P63135 1459 aa28.97■■■□□ 2.23
UBE2D4-208ENST00000454350 UGGT1Q9NYU2 1555 aa28.96■■■□□ 2.23
UBE2D4-208ENST00000454350 RRP7BPQ9NSQ0 103 aa28.95■■■□□ 2.22
UBE2D4-208ENST00000454350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.92■■■□□ 2.22
UBE2D4-208ENST00000454350 UBR1Q8IWV7 1749 aa28.89■■■□□ 2.22
UBE2D4-208ENST00000454350 ARHGAP31Q2M1Z3 1444 aa28.89■■■□□ 2.22
UBE2D4-208ENST00000454350 THEMISQ8N1K5 641 aaPredicted RBP28.88■■■□□ 2.21
UBE2D4-208ENST00000454350 MED14O60244 1454 aa28.87■■■□□ 2.21
UBE2D4-208ENST00000454350 ADGRL2O95490 1459 aa28.87■■■□□ 2.21
UBE2D4-208ENST00000454350 VWDEQ8N2E2 1590 aa28.87■■■□□ 2.21
UBE2D4-208ENST00000454350 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
UBE2D4-208ENST00000454350 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
UBE2D4-208ENST00000454350 ANKLE2Q86XL3 938 aa28.84■■■□□ 2.21
UBE2D4-208ENST00000454350 LMTK2Q8IWU2 1503 aa28.82■■■□□ 2.2
UBE2D4-208ENST00000454350 IQGAP1P46940 1657 aa28.82■■■□□ 2.2
UBE2D4-208ENST00000454350 NPHP4O75161 1426 aaPredicted RBP28.8■■■□□ 2.2
UBE2D4-208ENST00000454350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.2
UBE2D4-208ENST00000454350 STRCP1A6NGW2 1772 aa28.76■■■□□ 2.19
UBE2D4-208ENST00000454350 PIK3C2BO00750 1634 aa28.76■■■□□ 2.19
UBE2D4-208ENST00000454350 CPS1P31327 1500 aa28.75■■■□□ 2.19
UBE2D4-208ENST00000454350 FAM50AQ14320 339 aaKnown RBP28.75■■■□□ 2.19
UBE2D4-208ENST00000454350 ARHGAP23Q9P227 1491 aa28.74■■■□□ 2.19
UBE2D4-208ENST00000454350 KANK1Q14678 1352 aa28.74■■■□□ 2.19
UBE2D4-208ENST00000454350 SLIT1O75093 1534 aa28.73■■■□□ 2.19
UBE2D4-208ENST00000454350 EFCAB6Q5THR3 1501 aa28.72■■■□□ 2.19
UBE2D4-208ENST00000454350 SYNMO15061 1565 aa28.71■■■□□ 2.19
UBE2D4-208ENST00000454350 KDM5AP29375 1690 aaKnown RBP28.7■■■□□ 2.19
UBE2D4-208ENST00000454350 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
UBE2D4-208ENST00000454350 SCAF11Q99590 1463 aaKnown RBP28.68■■■□□ 2.18
UBE2D4-208ENST00000454350 UBAP1LF5GYI3 381 aa28.68■■■□□ 2.18
UBE2D4-208ENST00000454350 NOS1P29475 1434 aa28.67■■■□□ 2.18
UBE2D4-208ENST00000454350 LTKP29376 864 aa28.66■■■□□ 2.18
UBE2D4-208ENST00000454350 ALKQ9UM73 1620 aa28.63■■■□□ 2.17
UBE2D4-208ENST00000454350 UNC13BO14795 1591 aa28.62■■■□□ 2.17
UBE2D4-208ENST00000454350 TET3O43151 1660 aa28.62■■■□□ 2.17
UBE2D4-208ENST00000454350 IDI1Q13907 227 aa28.61■■■□□ 2.17
UBE2D4-208ENST00000454350 GCC2Q8IWJ2 1684 aa28.6■■■□□ 2.17
UBE2D4-208ENST00000454350 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
UBE2D4-208ENST00000454350 ROCK1Q13464 1354 aa28.59■■■□□ 2.17
UBE2D4-208ENST00000454350 TXNDC2Q86VQ3 553 aa28.58■■■□□ 2.17
UBE2D4-208ENST00000454350 RPRD2Q5VT52 1461 aaKnown RBP28.58■■■□□ 2.17
UBE2D4-208ENST00000454350 LRRC7Q96NW7 1537 aa28.58■■■□□ 2.17
UBE2D4-208ENST00000454350 MYO5BQ9ULV0 1848 aa28.57■■■□□ 2.16
UBE2D4-208ENST00000454350 ADGRB3O60242 1522 aa28.56■■■□□ 2.16
UBE2D4-208ENST00000454350 XIRP1Q702N8 1843 aaKnown RBP28.56■■■□□ 2.16
UBE2D4-208ENST00000454350 E9PCH4 1651 aa28.52■■■□□ 2.16
UBE2D4-208ENST00000454350 PPARGC1BQ86YN6 1023 aaKnown RBP28.52■■■□□ 2.16
UBE2D4-208ENST00000454350 IQGAP3Q86VI3 1631 aa28.51■■■□□ 2.15
UBE2D4-208ENST00000454350 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
UBE2D4-208ENST00000454350 EID1Q9Y6B2 187 aa28.5■■■□□ 2.15
UBE2D4-208ENST00000454350 TOM1O60784 492 aa28.49■■■□□ 2.15
UBE2D4-208ENST00000454350 SLC52A1Q9NWF4 448 aa28.48■■■□□ 2.15
UBE2D4-208ENST00000454350 STAG3Q9UJ98 1225 aa28.48■■■□□ 2.15
UBE2D4-208ENST00000454350 TMEM131LA2VDJ0 1609 aa28.47■■■□□ 2.15
UBE2D4-208ENST00000454350 PIP4K2BP78356 416 aa28.45■■■□□ 2.14
UBE2D4-208ENST00000454350 HSPA1LP34931 641 aa28.43■■■□□ 2.14
UBE2D4-208ENST00000454350 ILDR2Q71H61 639 aa28.43■■■□□ 2.14
UBE2D4-208ENST00000454350 ZFYVE9O95405 1425 aa28.43■■■□□ 2.14
UBE2D4-208ENST00000454350 ITGAEP38570 1179 aa28.4■■■□□ 2.14
UBE2D4-208ENST00000454350 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
UBE2D4-208ENST00000454350 RRBP1Q9P2E9 1410 aaKnown RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms