RNA–Protein interactions for RNA: ENST00000453447.6

SPIRE1-206, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 5 BASIC

Gene SPIRE1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-206ENST00000453447 PCDH10Q9P2E7 1040 aa9.61□□□□□ -0.87
SPIRE1-206ENST00000453447 RNF123Q5XPI4 1314 aa9.6□□□□□ -0.87
SPIRE1-206ENST00000453447 LRP5O75197 1615 aa9.6□□□□□ -0.87
SPIRE1-206ENST00000453447 SMG6Q86US8 1419 aaKnown RBP9.6□□□□□ -0.87
SPIRE1-206ENST00000453447 KCNA4P22459 653 aa9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 PPM1GO15355 546 aaPredicted RBP9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 CNTLNQ9NXG0 1405 aa9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.59□□□□□ -0.87
SPIRE1-206ENST00000453447 TONSLQ96HA7 1378 aa9.58□□□□□ -0.88
SPIRE1-206ENST00000453447 RICTORQ6R327 1708 aa9.57□□□□□ -0.88
SPIRE1-206ENST00000453447 PKD2Q13563 968 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 MLECQ14165 292 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 ZMYM4Q5VZL5 1548 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
SPIRE1-206ENST00000453447 PLA2R1Q13018 1463 aa9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 IGF1RP08069 1367 aa9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 CDK12Q9NYV4 1490 aaPredicted RBP9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
SPIRE1-206ENST00000453447 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
SPIRE1-206ENST00000453447 NEFMP07197 916 aa9.54□□□□□ -0.88
SPIRE1-206ENST00000453447 C3P01024 1663 aa9.54□□□□□ -0.88
SPIRE1-206ENST00000453447 YY1P25490 414 aa9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 TCOF1Q13428 1488 aaKnown RBP9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
SPIRE1-206ENST00000453447 MAGI2Q86UL8 1455 aa9.52□□□□□ -0.89
SPIRE1-206ENST00000453447 SHANK2Q9UPX8 1470 aa9.51□□□□□ -0.89
SPIRE1-206ENST00000453447 PPP6R1Q9UPN7 881 aa9.51□□□□□ -0.89
SPIRE1-206ENST00000453447 CARMIL1Q5VZK9 1371 aa9.51□□□□□ -0.89
SPIRE1-206ENST00000453447 DENND4BO75064 1496 aaPredicted RBP9.51□□□□□ -0.89
SPIRE1-206ENST00000453447 CCDC18Q5T9S5 1454 aa9.51□□□□□ -0.89
SPIRE1-206ENST00000453447 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 TCERG1O14776 1098 aaKnown RBP9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 MS4A1P11836 297 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 SENP3Q9H4L4 574 aaPredicted RBP9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 GSE1Q14687 1217 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 FAM43AQ8N2R8 423 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 NUDCQ9Y266 331 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 HFM1A2PYH4 1435 aa9.5□□□□□ -0.89
SPIRE1-206ENST00000453447 PTPN23Q9H3S7 1636 aa9.49□□□□□ -0.89
SPIRE1-206ENST00000453447 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
SPIRE1-206ENST00000453447 BRPF3Q9ULD4 1205 aa9.49□□□□□ -0.89
SPIRE1-206ENST00000453447 RNF17Q9BXT8 1623 aaKnown RBP9.48□□□□□ -0.89
SPIRE1-206ENST00000453447 GLIPR1L2Q4G1C9 344 aa9.48□□□□□ -0.89
SPIRE1-206ENST00000453447 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
SPIRE1-206ENST00000453447 MRS2Q9HD23 443 aa9.47□□□□□ -0.89
SPIRE1-206ENST00000453447 CCDC7Q96M83 1385 aa9.46□□□□□ -0.89
SPIRE1-206ENST00000453447 HECW1Q76N89 1606 aa9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 CCDC184Q52MB2 194 aa9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 ZNF772Q68DY9 489 aaPredicted RBP9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 LAS1LQ9Y4W2 734 aaKnown RBP9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 FYCO1Q9BQS8 1478 aa9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
SPIRE1-206ENST00000453447 FAM50AQ14320 339 aaKnown RBP9.44□□□□□ -0.9
SPIRE1-206ENST00000453447 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
SPIRE1-206ENST00000453447 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPIRE1-206ENST00000453447 C9orf84Q5VXU9 1444 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 PDE4AP27815 886 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 ATP10AO60312 1499 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 NPATQ14207 1427 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 FGD6Q6ZV73 1430 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 RXRBP28702 533 aa9.43□□□□□ -0.9
SPIRE1-206ENST00000453447 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
SPIRE1-206ENST00000453447 VWDEQ8N2E2 1590 aa9.42□□□□□ -0.9
SPIRE1-206ENST00000453447 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
SPIRE1-206ENST00000453447 NHSL1Q5SYE7 1610 aa9.41□□□□□ -0.9
SPIRE1-206ENST00000453447 NAIPQ13075 1403 aa9.41□□□□□ -0.9
SPIRE1-206ENST00000453447 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.9
SPIRE1-206ENST00000453447 IQGAP2Q13576 1575 aa9.4□□□□□ -0.9
SPIRE1-206ENST00000453447 NFKBIBQ15653 356 aa9.4□□□□□ -0.9
SPIRE1-206ENST00000453447 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
SPIRE1-206ENST00000453447 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.91
SPIRE1-206ENST00000453447 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.91
SPIRE1-206ENST00000453447 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
SPIRE1-206ENST00000453447 CTTNBP2Q8WZ74 1663 aa9.39□□□□□ -0.91
SPIRE1-206ENST00000453447 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
SPIRE1-206ENST00000453447 SYNMO15061 1565 aa9.38□□□□□ -0.91
SPIRE1-206ENST00000453447 CFAP74Q9C0B2 1584 aa9.38□□□□□ -0.91
SPIRE1-206ENST00000453447 SPATA31E1Q6ZUB1 1445 aa9.38□□□□□ -0.91
SPIRE1-206ENST00000453447 ABCA8O94911 1581 aa9.37□□□□□ -0.91
SPIRE1-206ENST00000453447 MIA2Q96PC5 1412 aa9.36□□□□□ -0.91
SPIRE1-206ENST00000453447 RRP1P56182 461 aaKnown RBP9.36□□□□□ -0.91
SPIRE1-206ENST00000453447 C1QTNF8P60827 252 aa9.36□□□□□ -0.91
SPIRE1-206ENST00000453447 PDE4CQ08493 712 aa9.36□□□□□ -0.91
SPIRE1-206ENST00000453447 DHX29Q7Z478 1369 aaKnown RBP9.36□□□□□ -0.91
SPIRE1-206ENST00000453447 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms