RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CERKQ8TCT0 537 aa20.08■□□□□ 0.8
CHD3-206ENST00000452447 CAMSAP1Q5T5Y3 1602 aa20.07■□□□□ 0.8
CHD3-206ENST00000452447 NCOA1Q15788 1441 aa20.07■□□□□ 0.8
CHD3-206ENST00000452447 PTPRTO14522 1441 aa20.06■□□□□ 0.8
CHD3-206ENST00000452447 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
CHD3-206ENST00000452447 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
CHD3-206ENST00000452447 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
CHD3-206ENST00000452447 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
CHD3-206ENST00000452447 PZPP20742 1482 aa20.03■□□□□ 0.8
CHD3-206ENST00000452447 ABCC5O15440 1437 aa20.03■□□□□ 0.8
CHD3-206ENST00000452447 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
CHD3-206ENST00000452447 RNF17Q9BXT8 1623 aaKnown RBP20.02■□□□□ 0.8
CHD3-206ENST00000452447 DUOX2Q9NRD8 1548 aa20.02■□□□□ 0.8
CHD3-206ENST00000452447 TNRQ92752 1358 aa20.02■□□□□ 0.8
CHD3-206ENST00000452447 CROCC2H7BZ55 1655 aa20.01■□□□□ 0.79
CHD3-206ENST00000452447 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
CHD3-206ENST00000452447 KIF15Q9NS87 1388 aa20■□□□□ 0.79
CHD3-206ENST00000452447 NCKAP5LQ9HCH0 1330 aa20■□□□□ 0.79
CHD3-206ENST00000452447 RRP7BPQ9NSQ0 103 aa20■□□□□ 0.79
CHD3-206ENST00000452447 A2ML1A8K2U0 1454 aa20■□□□□ 0.79
CHD3-206ENST00000452447 TCOF1Q13428 1488 aaKnown RBP20■□□□□ 0.79
CHD3-206ENST00000452447 DAPK1P53355 1430 aa20■□□□□ 0.79
CHD3-206ENST00000452447 PLA2R1Q13018 1463 aa19.99■□□□□ 0.79
CHD3-206ENST00000452447 DNMT1P26358 1616 aaKnown RBP19.99■□□□□ 0.79
CHD3-206ENST00000452447 PKD2Q13563 968 aa19.99■□□□□ 0.79
CHD3-206ENST00000452447 ZC3H13Q5T200 1668 aaKnown RBP19.98■□□□□ 0.79
CHD3-206ENST00000452447 ABCC3O15438 1527 aa19.97■□□□□ 0.79
CHD3-206ENST00000452447 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
CHD3-206ENST00000452447 CFAP65Q6ZU64 1925 aaKnown RBP19.96■□□□□ 0.79
CHD3-206ENST00000452447 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
CHD3-206ENST00000452447 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
CHD3-206ENST00000452447 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
CHD3-206ENST00000452447 MROH1Q8NDA8 1641 aa19.93■□□□□ 0.78
CHD3-206ENST00000452447 CEP152O94986 1710 aa19.92■□□□□ 0.78
CHD3-206ENST00000452447 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
CHD3-206ENST00000452447 THEMISQ8N1K5 641 aaPredicted RBP19.91■□□□□ 0.78
CHD3-206ENST00000452447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.785e-6■■□□□ 13.6
CHD3-206ENST00000452447 LTBP4Q8N2S1 1624 aa19.89■□□□□ 0.78
CHD3-206ENST00000452447 UGGT1Q9NYU2 1555 aa19.89■□□□□ 0.77
CHD3-206ENST00000452447 PRDM15P57071 1507 aaPredicted RBP19.88■□□□□ 0.77
CHD3-206ENST00000452447 KANK1Q14678 1352 aa19.88■□□□□ 0.77
CHD3-206ENST00000452447 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
CHD3-206ENST00000452447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.88■□□□□ 0.77
CHD3-206ENST00000452447 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
CHD3-206ENST00000452447 ERVK-7P63135 1459 aa19.87■□□□□ 0.77
CHD3-206ENST00000452447 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
CHD3-206ENST00000452447 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
CHD3-206ENST00000452447 DEPDC5O75140 1603 aa19.86■□□□□ 0.77
CHD3-206ENST00000452447 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
CHD3-206ENST00000452447 ARHGAP31Q2M1Z3 1444 aa19.83■□□□□ 0.77
CHD3-206ENST00000452447 IQSEC2Q5JU85 1478 aa19.82■□□□□ 0.76
CHD3-206ENST00000452447 NEURL4Q96JN8 1562 aa19.81■□□□□ 0.76
CHD3-206ENST00000452447 PPARGC1BQ86YN6 1023 aaKnown RBP19.79■□□□□ 0.76
CHD3-206ENST00000452447 ANKRD50Q9ULJ7 1429 aa19.79■□□□□ 0.76
CHD3-206ENST00000452447 LMTK2Q8IWU2 1503 aa19.77■□□□□ 0.76
CHD3-206ENST00000452447 NPHP4O75161 1426 aaPredicted RBP19.77■□□□□ 0.75
CHD3-206ENST00000452447 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
CHD3-206ENST00000452447 MED14O60244 1454 aa19.76■□□□□ 0.75
CHD3-206ENST00000452447 VWDEQ8N2E2 1590 aa19.76■□□□□ 0.75
CHD3-206ENST00000452447 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
CHD3-206ENST00000452447 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
CHD3-206ENST00000452447 ITGAEP38570 1179 aa19.73■□□□□ 0.75
CHD3-206ENST00000452447 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
CHD3-206ENST00000452447 CPS1P31327 1500 aa19.71■□□□□ 0.75
CHD3-206ENST00000452447 EFCAB6Q5THR3 1501 aa19.71■□□□□ 0.75
CHD3-206ENST00000452447 ROCK1Q13464 1354 aa19.7■□□□□ 0.74
CHD3-206ENST00000452447 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
CHD3-206ENST00000452447 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
CHD3-206ENST00000452447 PIK3C2BO00750 1634 aa19.7■□□□□ 0.74
CHD3-206ENST00000452447 IDI1Q13907 227 aa19.7■□□□□ 0.74
CHD3-206ENST00000452447 SCAF11Q99590 1463 aaKnown RBP19.69■□□□□ 0.74
CHD3-206ENST00000452447 SLIT1O75093 1534 aa19.68■□□□□ 0.74
CHD3-206ENST00000452447 LTKP29376 864 aa19.67■□□□□ 0.74
CHD3-206ENST00000452447 NOS1P29475 1434 aa19.67■□□□□ 0.74
CHD3-206ENST00000452447 SLC52A1Q9NWF4 448 aa19.66■□□□□ 0.74
CHD3-206ENST00000452447 RPRD2Q5VT52 1461 aaKnown RBP19.66■□□□□ 0.74
CHD3-206ENST00000452447 ARHGAP23Q9P227 1491 aa19.66■□□□□ 0.74
CHD3-206ENST00000452447 SYNMO15061 1565 aa19.65■□□□□ 0.74
CHD3-206ENST00000452447 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
CHD3-206ENST00000452447 TET3O43151 1660 aa19.65■□□□□ 0.74
CHD3-206ENST00000452447 KDM5AP29375 1690 aaKnown RBP19.65■□□□□ 0.74
CHD3-206ENST00000452447 UNC13BO14795 1591 aa19.65■□□□□ 0.74
CHD3-206ENST00000452447 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
CHD3-206ENST00000452447 TOM1O60784 492 aa19.62■□□□□ 0.73
CHD3-206ENST00000452447 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
CHD3-206ENST00000452447 NUP155O75694 1391 aa19.6■□□□□ 0.73
CHD3-206ENST00000452447 ADGRB3O60242 1522 aa19.59■□□□□ 0.73
CHD3-206ENST00000452447 STRCP1A6NGW2 1772 aa19.59■□□□□ 0.73
CHD3-206ENST00000452447 PIP4K2BP78356 416 aa19.58■□□□□ 0.73
CHD3-206ENST00000452447 IQGAP3Q86VI3 1631 aa19.58■□□□□ 0.72
CHD3-206ENST00000452447 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
CHD3-206ENST00000452447 E9PCH4 1651 aa19.56■□□□□ 0.72
CHD3-206ENST00000452447 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
CHD3-206ENST00000452447 BCANQ96GW7 911 aa19.55■□□□□ 0.72
CHD3-206ENST00000452447 MYO5BQ9ULV0 1848 aa19.55■□□□□ 0.72
CHD3-206ENST00000452447 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
CHD3-206ENST00000452447 CHGAP10645 457 aaKnown RBP19.53■□□□□ 0.72
CHD3-206ENST00000452447 DISP3Q9P2K9 1392 aa19.53■□□□□ 0.72
CHD3-206ENST00000452447 SLC26A8Q96RN1 970 aa19.53■□□□□ 0.72
CHD3-206ENST00000452447 PPP1R15AO75807 674 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms