RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TCOF1Q13428 1488 aaKnown RBP24.92■■□□□ 1.58
SGCE-208ENST00000450385 FGD6Q6ZV73 1430 aa24.92■■□□□ 1.58
SGCE-208ENST00000450385 FBXO41Q8TF61 875 aa24.91■■□□□ 1.58
SGCE-208ENST00000450385 PTPRTO14522 1441 aa24.91■■□□□ 1.58
SGCE-208ENST00000450385 DUOX2Q9NRD8 1548 aa24.9■■□□□ 1.58
SGCE-208ENST00000450385 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
SGCE-208ENST00000450385 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
SGCE-208ENST00000450385 ABCC5O15440 1437 aa24.87■■□□□ 1.57
SGCE-208ENST00000450385 PZPP20742 1482 aa24.87■■□□□ 1.57
SGCE-208ENST00000450385 CROCC2H7BZ55 1655 aa24.87■■□□□ 1.57
SGCE-208ENST00000450385 DNMT1P26358 1616 aaKnown RBP24.86■■□□□ 1.57
SGCE-208ENST00000450385 NCOA1Q15788 1441 aa24.86■■□□□ 1.57
SGCE-208ENST00000450385 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
SGCE-208ENST00000450385 DAPK1P53355 1430 aa24.85■■□□□ 1.57
SGCE-208ENST00000450385 MYO3AQ8NEV4 1616 aa24.84■■□□□ 1.57
SGCE-208ENST00000450385 PKD2Q13563 968 aa24.84■■□□□ 1.57
SGCE-208ENST00000450385 PLA2R1Q13018 1463 aa24.83■■□□□ 1.57
SGCE-208ENST00000450385 ERBINQ96RT1 1412 aa24.83■■□□□ 1.57
SGCE-208ENST00000450385 CEP170BQ9Y4F5 1589 aaPredicted RBP24.82■■□□□ 1.56
SGCE-208ENST00000450385 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
SGCE-208ENST00000450385 KIF15Q9NS87 1388 aa24.81■■□□□ 1.56
SGCE-208ENST00000450385 A2ML1A8K2U0 1454 aa24.81■■□□□ 1.56
SGCE-208ENST00000450385 ANKRD30AQ9BXX3 1397 aa24.8■■□□□ 1.56
SGCE-208ENST00000450385 TNRQ92752 1358 aa24.8■■□□□ 1.56
SGCE-208ENST00000450385 CERKQ8TCT0 537 aa24.79■■□□□ 1.56
SGCE-208ENST00000450385 NLRP1Q9C000 1473 aa24.77■■□□□ 1.56
SGCE-208ENST00000450385 ABCC3O15438 1527 aa24.76■■□□□ 1.55
SGCE-208ENST00000450385 RRP7BPQ9NSQ0 103 aa24.76■■□□□ 1.55
SGCE-208ENST00000450385 FBXO31Q5XUX0 539 aaPredicted RBP24.74■■□□□ 1.55
SGCE-208ENST00000450385 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
SGCE-208ENST00000450385 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
SGCE-208ENST00000450385 ADGRL2O95490 1459 aa24.72■■□□□ 1.55
SGCE-208ENST00000450385 PRDM15P57071 1507 aaPredicted RBP24.71■■□□□ 1.55
SGCE-208ENST00000450385 ARHGAP31Q2M1Z3 1444 aa24.71■■□□□ 1.55
SGCE-208ENST00000450385 KANK1Q14678 1352 aa24.71■■□□□ 1.55
SGCE-208ENST00000450385 DEPDC5O75140 1603 aa24.7■■□□□ 1.54
SGCE-208ENST00000450385 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
SGCE-208ENST00000450385 FAM50AQ14320 339 aaKnown RBP24.69■■□□□ 1.54
SGCE-208ENST00000450385 NCKAP5LQ9HCH0 1330 aa24.67■■□□□ 1.54
SGCE-208ENST00000450385 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
SGCE-208ENST00000450385 IQSEC2Q5JU85 1478 aa24.66■■□□□ 1.54
SGCE-208ENST00000450385 CEP152O94986 1710 aa24.66■■□□□ 1.54
SGCE-208ENST00000450385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.66■■□□□ 1.54
SGCE-208ENST00000450385 UGGT1Q9NYU2 1555 aa24.64■■□□□ 1.54
SGCE-208ENST00000450385 ANKLE2Q86XL3 938 aa24.64■■□□□ 1.54
SGCE-208ENST00000450385 ERVK-7P63135 1459 aa24.64■■□□□ 1.53
SGCE-208ENST00000450385 CFAP65Q6ZU64 1925 aaKnown RBP24.63■■□□□ 1.53
SGCE-208ENST00000450385 LMTK2Q8IWU2 1503 aa24.62■■□□□ 1.53
SGCE-208ENST00000450385 POLR1AO95602 1720 aaPredicted RBP24.61■■□□□ 1.53
SGCE-208ENST00000450385 LTBP4Q8N2S1 1624 aa24.61■■□□□ 1.53
SGCE-208ENST00000450385 ROCK1Q13464 1354 aa24.6■■□□□ 1.53
SGCE-208ENST00000450385 VWDEQ8N2E2 1590 aa24.59■■□□□ 1.53
SGCE-208ENST00000450385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
SGCE-208ENST00000450385 ANKRD50Q9ULJ7 1429 aa24.58■■□□□ 1.53
SGCE-208ENST00000450385 MED14O60244 1454 aa24.57■■□□□ 1.52
SGCE-208ENST00000450385 KDM5AP29375 1690 aaKnown RBP24.52■■□□□ 1.52
SGCE-208ENST00000450385 RPRD2Q5VT52 1461 aaKnown RBP24.51■■□□□ 1.51
SGCE-208ENST00000450385 UBR1Q8IWV7 1749 aa24.51■■□□□ 1.51
SGCE-208ENST00000450385 NEURL4Q96JN8 1562 aa24.5■■□□□ 1.51
SGCE-208ENST00000450385 SLC52A1Q9NWF4 448 aa24.49■■□□□ 1.51
SGCE-208ENST00000450385 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
SGCE-208ENST00000450385 EFCAB6Q5THR3 1501 aa24.48■■□□□ 1.51
SGCE-208ENST00000450385 NPHP4O75161 1426 aaPredicted RBP24.47■■□□□ 1.51
SGCE-208ENST00000450385 SLIT1O75093 1534 aa24.45■■□□□ 1.51
SGCE-208ENST00000450385 CPS1P31327 1500 aa24.45■■□□□ 1.51
SGCE-208ENST00000450385 NOS1P29475 1434 aa24.45■■□□□ 1.51
SGCE-208ENST00000450385 EID1Q9Y6B2 187 aa24.44■■□□□ 1.5
SGCE-208ENST00000450385 ARHGAP23Q9P227 1491 aa24.44■■□□□ 1.5
SGCE-208ENST00000450385 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
SGCE-208ENST00000450385 UNC13BO14795 1591 aa24.43■■□□□ 1.5
SGCE-208ENST00000450385 TET3O43151 1660 aa24.43■■□□□ 1.5
SGCE-208ENST00000450385 IDI1Q13907 227 aa24.42■■□□□ 1.5
SGCE-208ENST00000450385 STAG3Q9UJ98 1225 aa24.42■■□□□ 1.5
SGCE-208ENST00000450385 RRBP1Q9P2E9 1410 aaKnown RBP24.42■■□□□ 1.5
SGCE-208ENST00000450385 SCAF11Q99590 1463 aaKnown RBP24.41■■□□□ 1.5
SGCE-208ENST00000450385 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
SGCE-208ENST00000450385 TXNDC2Q86VQ3 553 aa24.4■■□□□ 1.5
SGCE-208ENST00000450385 PIK3C2BO00750 1634 aa24.39■■□□□ 1.5
SGCE-208ENST00000450385 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
SGCE-208ENST00000450385 SYNMO15061 1565 aa24.37■■□□□ 1.49
SGCE-208ENST00000450385 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
SGCE-208ENST00000450385 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
SGCE-208ENST00000450385 HDGFP51858 240 aaKnown RBP24.35■■□□□ 1.49
SGCE-208ENST00000450385 LTKP29376 864 aa24.34■■□□□ 1.49
SGCE-208ENST00000450385 ITGAEP38570 1179 aa24.34■■□□□ 1.49
SGCE-208ENST00000450385 NUP155O75694 1391 aa24.31■■□□□ 1.48
SGCE-208ENST00000450385 UBAP1LF5GYI3 381 aa24.31■■□□□ 1.48
SGCE-208ENST00000450385 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
SGCE-208ENST00000450385 TOM1O60784 492 aa24.3■■□□□ 1.48
SGCE-208ENST00000450385 E9PCH4 1651 aa24.27■■□□□ 1.48
SGCE-208ENST00000450385 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.23■■□□□ 1.47
SGCE-208ENST00000450385 TMEM131LA2VDJ0 1609 aa24.22■■□□□ 1.47
SGCE-208ENST00000450385 NAIPQ13075 1403 aa24.21■■□□□ 1.47
SGCE-208ENST00000450385 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
SGCE-208ENST00000450385 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.46
SGCE-208ENST00000450385 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
SGCE-208ENST00000450385 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
SGCE-208ENST00000450385 MYO5BQ9ULV0 1848 aa24.18■■□□□ 1.46
SGCE-208ENST00000450385 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
SGCE-208ENST00000450385 KCNA6P17658 529 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms