RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
COPS7B-213ENST00000449174 TSPY4P0CV99 314 aa18.48■□□□□ 0.55
COPS7B-213ENST00000449174 TSPY10P0CW01 314 aa18.48■□□□□ 0.55
COPS7B-213ENST00000449174 PZPP20742 1482 aa18.47■□□□□ 0.55
COPS7B-213ENST00000449174 KIF3BO15066 747 aa18.47■□□□□ 0.55
COPS7B-213ENST00000449174 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
COPS7B-213ENST00000449174 DNMT1P26358 1616 aaKnown RBP18.46■□□□□ 0.55
COPS7B-213ENST00000449174 MAST1Q9Y2H9 1570 aa18.45■□□□□ 0.54
COPS7B-213ENST00000449174 WASHC2CQ9Y4E1 1318 aa18.45■□□□□ 0.54
COPS7B-213ENST00000449174 TNRQ92752 1358 aa18.43■□□□□ 0.54
COPS7B-213ENST00000449174 MIA2Q96PC5 1412 aa18.42■□□□□ 0.54
COPS7B-213ENST00000449174 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
COPS7B-213ENST00000449174 ZC3H13Q5T200 1668 aaKnown RBP18.41■□□□□ 0.54
COPS7B-213ENST00000449174 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
COPS7B-213ENST00000449174 POLR1AO95602 1720 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-213ENST00000449174 NLRP1Q9C000 1473 aa18.4■□□□□ 0.54
COPS7B-213ENST00000449174 ZNF335Q9H4Z2 1342 aaPredicted RBP18.4■□□□□ 0.54
COPS7B-213ENST00000449174 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.53
COPS7B-213ENST00000449174 FBXO31Q5XUX0 539 aaPredicted RBP18.37■□□□□ 0.53
COPS7B-213ENST00000449174 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
COPS7B-213ENST00000449174 DISP3Q9P2K9 1392 aa18.35■□□□□ 0.53
COPS7B-213ENST00000449174 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
COPS7B-213ENST00000449174 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
COPS7B-213ENST00000449174 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
COPS7B-213ENST00000449174 ABCC3O15438 1527 aa18.34■□□□□ 0.53
COPS7B-213ENST00000449174 CPS1P31327 1500 aa18.34■□□□□ 0.53
COPS7B-213ENST00000449174 KANK4Q5T7N3 995 aaPredicted RBP18.34■□□□□ 0.53
COPS7B-213ENST00000449174 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.53
COPS7B-213ENST00000449174 ANKLE2Q86XL3 938 aa18.33■□□□□ 0.52
COPS7B-213ENST00000449174 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
COPS7B-213ENST00000449174 SPATA31D1Q6ZQQ2 1576 aa18.33■□□□□ 0.52
COPS7B-213ENST00000449174 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
COPS7B-213ENST00000449174 UBAP1LF5GYI3 381 aa18.31■□□□□ 0.52
COPS7B-213ENST00000449174 MED14O60244 1454 aa18.31■□□□□ 0.52
COPS7B-213ENST00000449174 APLP2Q06481 763 aa18.3■□□□□ 0.52
COPS7B-213ENST00000449174 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
COPS7B-213ENST00000449174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
COPS7B-213ENST00000449174 CROCC2H7BZ55 1655 aa18.29■□□□□ 0.52
COPS7B-213ENST00000449174 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
COPS7B-213ENST00000449174 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
COPS7B-213ENST00000449174 ERBINQ96RT1 1412 aa18.27■□□□□ 0.52
COPS7B-213ENST00000449174 PTPN23Q9H3S7 1636 aa18.27■□□□□ 0.51
COPS7B-213ENST00000449174 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
COPS7B-213ENST00000449174 PRDM15P57071 1507 aaPredicted RBP18.26■□□□□ 0.51
COPS7B-213ENST00000449174 CEP152O94986 1710 aa18.26■□□□□ 0.51
COPS7B-213ENST00000449174 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
COPS7B-213ENST00000449174 VWDEQ8N2E2 1590 aa18.25■□□□□ 0.51
COPS7B-213ENST00000449174 ARHGAP31Q2M1Z3 1444 aa18.24■□□□□ 0.51
COPS7B-213ENST00000449174 ABCC5O15440 1437 aa18.23■□□□□ 0.51
COPS7B-213ENST00000449174 TOM1O60784 492 aa18.23■□□□□ 0.51
COPS7B-213ENST00000449174 DAPK1P53355 1430 aa18.22■□□□□ 0.51
COPS7B-213ENST00000449174 UBR1Q8IWV7 1749 aa18.21■□□□□ 0.51
COPS7B-213ENST00000449174 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
COPS7B-213ENST00000449174 SYNMO15061 1565 aa18.19■□□□□ 0.5
COPS7B-213ENST00000449174 ILDR2Q71H61 639 aa18.19■□□□□ 0.5
COPS7B-213ENST00000449174 KANK1Q14678 1352 aa18.18■□□□□ 0.5
COPS7B-213ENST00000449174 SOCS7O14512 581 aa18.18■□□□□ 0.5
COPS7B-213ENST00000449174 RRP7BPQ9NSQ0 103 aa18.18■□□□□ 0.5
COPS7B-213ENST00000449174 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
COPS7B-213ENST00000449174 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
COPS7B-213ENST00000449174 SLIT1O75093 1534 aa18.17■□□□□ 0.5
COPS7B-213ENST00000449174 ARHGAP23Q9P227 1491 aa18.16■□□□□ 0.5
COPS7B-213ENST00000449174 KDM5AP29375 1690 aaKnown RBP18.15■□□□□ 0.5
COPS7B-213ENST00000449174 LMTK2Q8IWU2 1503 aa18.15■□□□□ 0.5
COPS7B-213ENST00000449174 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
COPS7B-213ENST00000449174 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
COPS7B-213ENST00000449174 CFAP65Q6ZU64 1925 aaKnown RBP18.13■□□□□ 0.49
COPS7B-213ENST00000449174 EID1Q9Y6B2 187 aa18.12■□□□□ 0.49
COPS7B-213ENST00000449174 LRRC7Q96NW7 1537 aa18.12■□□□□ 0.49
COPS7B-213ENST00000449174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.11■□□□□ 0.496e-8■■□□□ 11.8
COPS7B-213ENST00000449174 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
COPS7B-213ENST00000449174 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
COPS7B-213ENST00000449174 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
COPS7B-213ENST00000449174 HSPA1LP34931 641 aa18.1■□□□□ 0.49
COPS7B-213ENST00000449174 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
COPS7B-213ENST00000449174 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
COPS7B-213ENST00000449174 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
COPS7B-213ENST00000449174 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.48
COPS7B-213ENST00000449174 LTKP29376 864 aa18.07■□□□□ 0.48
COPS7B-213ENST00000449174 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
COPS7B-213ENST00000449174 MED1Q15648 1581 aaPredicted RBP18.06■□□□□ 0.48
COPS7B-213ENST00000449174 CHIC2Q9UKJ5 165 aa18.06■□□□□ 0.48
COPS7B-213ENST00000449174 RPRD2Q5VT52 1461 aaKnown RBP18.05■□□□□ 0.48
COPS7B-213ENST00000449174 NOS1P29475 1434 aa18.04■□□□□ 0.48
COPS7B-213ENST00000449174 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
COPS7B-213ENST00000449174 ADGRB3O60242 1522 aa18.03■□□□□ 0.48
COPS7B-213ENST00000449174 IDI1Q13907 227 aa18.02■□□□□ 0.48
COPS7B-213ENST00000449174 ANKRD50Q9ULJ7 1429 aa18.02■□□□□ 0.48
COPS7B-213ENST00000449174 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
COPS7B-213ENST00000449174 TET3O43151 1660 aa17.99■□□□□ 0.47
COPS7B-213ENST00000449174 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
COPS7B-213ENST00000449174 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
COPS7B-213ENST00000449174 UNC13BO14795 1591 aa17.96■□□□□ 0.46
COPS7B-213ENST00000449174 KCNA6P17658 529 aa17.95■□□□□ 0.46
COPS7B-213ENST00000449174 NKTRP30414 1462 aaKnown RBP17.95■□□□□ 0.46
COPS7B-213ENST00000449174 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
COPS7B-213ENST00000449174 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
COPS7B-213ENST00000449174 NWD1Q149M9 1564 aa17.94■□□□□ 0.46
COPS7B-213ENST00000449174 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
COPS7B-213ENST00000449174 FAM135BQ49AJ0 1406 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms