RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
COPS7B-213ENST00000449174 CCDC180Q9P1Z9 1646 aa26.3■■□□□ 1.8
COPS7B-213ENST00000449174 ABCC9O60706 1549 aa26.19■■□□□ 1.78
COPS7B-213ENST00000449174 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
COPS7B-213ENST00000449174 NACADO15069 1562 aa24.86■■□□□ 1.57
COPS7B-213ENST00000449174 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
COPS7B-213ENST00000449174 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
COPS7B-213ENST00000449174 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
COPS7B-213ENST00000449174 UNC13AQ9UPW8 1703 aa24.39■■□□□ 1.5
COPS7B-213ENST00000449174 PABPN1Q86U42 306 aaKnown RBP eCLIP24.32■■□□□ 1.48
COPS7B-213ENST00000449174 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
COPS7B-213ENST00000449174 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
COPS7B-213ENST00000449174 DCAF1Q9Y4B6 1507 aa24.2■■□□□ 1.47
COPS7B-213ENST00000449174 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
COPS7B-213ENST00000449174 SCRIBQ14160 1630 aa23.86■■□□□ 1.41
COPS7B-213ENST00000449174 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
COPS7B-213ENST00000449174 EIF4G1Q04637 1599 aaKnown RBP23.66■■□□□ 1.38
COPS7B-213ENST00000449174 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
COPS7B-213ENST00000449174 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
COPS7B-213ENST00000449174 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
COPS7B-213ENST00000449174 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
COPS7B-213ENST00000449174 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
COPS7B-213ENST00000449174 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
COPS7B-213ENST00000449174 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
COPS7B-213ENST00000449174 CUX2O14529 1486 aa22.68■■□□□ 1.22
COPS7B-213ENST00000449174 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
COPS7B-213ENST00000449174 PEG3Q9GZU2 1588 aa22.63■■□□□ 1.21
COPS7B-213ENST00000449174 DNAJC5Q9H3Z4 198 aa22.62■■□□□ 1.21
COPS7B-213ENST00000449174 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
COPS7B-213ENST00000449174 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
COPS7B-213ENST00000449174 NESP48681 1621 aa22.46■■□□□ 1.19
COPS7B-213ENST00000449174 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
COPS7B-213ENST00000449174 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
COPS7B-213ENST00000449174 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
COPS7B-213ENST00000449174 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
COPS7B-213ENST00000449174 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
COPS7B-213ENST00000449174 WIZO95785 1651 aa22.2■■□□□ 1.14
COPS7B-213ENST00000449174 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
COPS7B-213ENST00000449174 WDR62O43379 1518 aa22.04■■□□□ 1.12
COPS7B-213ENST00000449174 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
COPS7B-213ENST00000449174 CEP164Q9UPV0 1460 aa21.99■■□□□ 1.11
COPS7B-213ENST00000449174 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
COPS7B-213ENST00000449174 CFTRP13569 1480 aa21.96■■□□□ 1.11
COPS7B-213ENST00000449174 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
COPS7B-213ENST00000449174 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
COPS7B-213ENST00000449174 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
COPS7B-213ENST00000449174 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
COPS7B-213ENST00000449174 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
COPS7B-213ENST00000449174 IFT140Q96RY7 1462 aa21.57■■□□□ 1.04
COPS7B-213ENST00000449174 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
COPS7B-213ENST00000449174 TRIM41Q8WV44 630 aa21.55■■□□□ 1.04
COPS7B-213ENST00000449174 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
COPS7B-213ENST00000449174 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
COPS7B-213ENST00000449174 ZNF608Q9ULD9 1512 aaPredicted RBP21.45■■□□□ 1.02
COPS7B-213ENST00000449174 EIF4G3O43432 1585 aaKnown RBP21.39■■□□□ 1.01
COPS7B-213ENST00000449174 TARBP1Q13395 1621 aaKnown RBP21.34■■□□□ 1.01
COPS7B-213ENST00000449174 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
COPS7B-213ENST00000449174 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
COPS7B-213ENST00000449174 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
COPS7B-213ENST00000449174 POLA1P09884 1462 aaPredicted RBP21.29■■□□□ 1
COPS7B-213ENST00000449174 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
COPS7B-213ENST00000449174 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
COPS7B-213ENST00000449174 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
COPS7B-213ENST00000449174 CHD1O14646 1710 aa21.21■□□□□ 0.99
COPS7B-213ENST00000449174 SOGA1O94964 1423 aa21.2■□□□□ 0.98
COPS7B-213ENST00000449174 RAD54L2Q9Y4B4 1467 aa21.17■□□□□ 0.98
COPS7B-213ENST00000449174 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
COPS7B-213ENST00000449174 CUX1P39880 1505 aa21.12■□□□□ 0.97
COPS7B-213ENST00000449174 TDRD9Q8NDG6 1382 aaKnown RBP21.11■□□□□ 0.97
COPS7B-213ENST00000449174 FBLN2P98095 1184 aa21.1■□□□□ 0.97
COPS7B-213ENST00000449174 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
COPS7B-213ENST00000449174 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
COPS7B-213ENST00000449174 GRIN2BQ13224 1484 aa21.04■□□□□ 0.96
COPS7B-213ENST00000449174 CYB5RLQ6IPT4 315 aa21.03■□□□□ 0.96
COPS7B-213ENST00000449174 SYNJ1O43426 1573 aa21.02■□□□□ 0.95
COPS7B-213ENST00000449174 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
COPS7B-213ENST00000449174 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
COPS7B-213ENST00000449174 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
COPS7B-213ENST00000449174 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
COPS7B-213ENST00000449174 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
COPS7B-213ENST00000449174 GAPVD1Q14C86 1478 aa20.95■□□□□ 0.94
COPS7B-213ENST00000449174 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
COPS7B-213ENST00000449174 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
COPS7B-213ENST00000449174 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
COPS7B-213ENST00000449174 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
COPS7B-213ENST00000449174 BIVM-ERCC5R4GMW8 1640 aa20.83■□□□□ 0.93
COPS7B-213ENST00000449174 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
COPS7B-213ENST00000449174 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
COPS7B-213ENST00000449174 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
COPS7B-213ENST00000449174 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
COPS7B-213ENST00000449174 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
COPS7B-213ENST00000449174 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
COPS7B-213ENST00000449174 NUP160Q12769 1436 aa20.7■□□□□ 0.9
COPS7B-213ENST00000449174 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
COPS7B-213ENST00000449174 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
COPS7B-213ENST00000449174 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
COPS7B-213ENST00000449174 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
COPS7B-213ENST00000449174 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
COPS7B-213ENST00000449174 JPH4Q96JJ6 628 aa20.45■□□□□ 0.86
COPS7B-213ENST00000449174 KIF27Q86VH2 1401 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms