RNA–Protein interactions for RNA: ENST00000441198.4

PTCRA-202, Transcript of pre T cell antigen receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PTCRA, Length 1,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-202ENST00000441198 CAMSAP2Q08AD1 1489 aa30.18■■■□□ 2.42
PTCRA-202ENST00000441198 FBXO31Q5XUX0 539 aaPredicted RBP30.17■■■□□ 2.42
PTCRA-202ENST00000441198 KIF3BO15066 747 aa30.16■■■□□ 2.42
PTCRA-202ENST00000441198 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
PTCRA-202ENST00000441198 KDM5DQ9BY66 1539 aa30.16■■■□□ 2.42
PTCRA-202ENST00000441198 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
PTCRA-202ENST00000441198 TNRQ92752 1358 aa30.15■■■□□ 2.42
PTCRA-202ENST00000441198 NEURL4Q96JN8 1562 aa30.14■■■□□ 2.42
PTCRA-202ENST00000441198 PZPP20742 1482 aa30.13■■■□□ 2.41
PTCRA-202ENST00000441198 FAM135AQ9P2D6 1515 aa30.12■■■□□ 2.41
PTCRA-202ENST00000441198 WASHC2CQ9Y4E1 1318 aa30.07■■■□□ 2.4
PTCRA-202ENST00000441198 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
PTCRA-202ENST00000441198 ARHGEF5Q12774 1597 aa30.06■■■□□ 2.4
PTCRA-202ENST00000441198 CPS1P31327 1500 aa30.03■■■□□ 2.4
PTCRA-202ENST00000441198 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
PTCRA-202ENST00000441198 SHANK2Q9UPX8 1470 aa30.02■■■□□ 2.4
PTCRA-202ENST00000441198 MIA2Q96PC5 1412 aa30.02■■■□□ 2.4
PTCRA-202ENST00000441198 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
PTCRA-202ENST00000441198 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
PTCRA-202ENST00000441198 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
PTCRA-202ENST00000441198 TSPY4P0CV99 314 aa29.97■■■□□ 2.39
PTCRA-202ENST00000441198 TSPY10P0CW01 314 aa29.97■■■□□ 2.39
PTCRA-202ENST00000441198 ANKLE2Q86XL3 938 aa29.97■■■□□ 2.39
PTCRA-202ENST00000441198 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
PTCRA-202ENST00000441198 RNF17Q9BXT8 1623 aaKnown RBP29.96■■■□□ 2.39
PTCRA-202ENST00000441198 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
PTCRA-202ENST00000441198 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
PTCRA-202ENST00000441198 DEPDC5O75140 1603 aa29.95■■■□□ 2.38
PTCRA-202ENST00000441198 HSPA1LP34931 641 aa29.94■■■□□ 2.38
PTCRA-202ENST00000441198 MED14O60244 1454 aa29.93■■■□□ 2.38
PTCRA-202ENST00000441198 NPHP4O75161 1426 aaPredicted RBP29.93■■■□□ 2.38
PTCRA-202ENST00000441198 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
PTCRA-202ENST00000441198 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
PTCRA-202ENST00000441198 ABCC3O15438 1527 aa29.92■■■□□ 2.38
PTCRA-202ENST00000441198 TOM1O60784 492 aa29.92■■■□□ 2.38
PTCRA-202ENST00000441198 ZC3H13Q5T200 1668 aaKnown RBP29.91■■■□□ 2.38
PTCRA-202ENST00000441198 IQGAP1P46940 1657 aa29.89■■■□□ 2.38
PTCRA-202ENST00000441198 MED1Q15648 1581 aaPredicted RBP29.88■■■□□ 2.37
PTCRA-202ENST00000441198 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
PTCRA-202ENST00000441198 MROH1Q8NDA8 1641 aa29.87■■■□□ 2.37
PTCRA-202ENST00000441198 EIF2AK4Q9P2K8 1649 aaKnown RBP29.87■■■□□ 2.37
PTCRA-202ENST00000441198 ALKQ9UM73 1620 aa29.87■■■□□ 2.37
PTCRA-202ENST00000441198 ERVK-7P63135 1459 aa29.85■■■□□ 2.37
PTCRA-202ENST00000441198 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
PTCRA-202ENST00000441198 CEP152O94986 1710 aa29.83■■■□□ 2.37
PTCRA-202ENST00000441198 KANK4Q5T7N3 995 aaPredicted RBP29.81■■■□□ 2.36
PTCRA-202ENST00000441198 CFAP65Q6ZU64 1925 aaKnown RBP29.79■■■□□ 2.36
PTCRA-202ENST00000441198 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
PTCRA-202ENST00000441198 UBR1Q8IWV7 1749 aa29.77■■■□□ 2.36
PTCRA-202ENST00000441198 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.36
PTCRA-202ENST00000441198 MAP3K1Q13233 1512 aa29.76■■■□□ 2.35
PTCRA-202ENST00000441198 DUOX2Q9NRD8 1548 aa29.75■■■□□ 2.35
PTCRA-202ENST00000441198 SYNMO15061 1565 aa29.74■■■□□ 2.35
PTCRA-202ENST00000441198 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
PTCRA-202ENST00000441198 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
PTCRA-202ENST00000441198 SCAF11Q99590 1463 aaKnown RBP29.68■■■□□ 2.34
PTCRA-202ENST00000441198 CROCC2H7BZ55 1655 aa29.67■■■□□ 2.34
PTCRA-202ENST00000441198 ARHGAP23Q9P227 1491 aa29.67■■■□□ 2.34
PTCRA-202ENST00000441198 KIF15Q9NS87 1388 aa29.66■■■□□ 2.34
PTCRA-202ENST00000441198 SLIT1O75093 1534 aa29.66■■■□□ 2.34
PTCRA-202ENST00000441198 ARHGAP31Q2M1Z3 1444 aa29.65■■■□□ 2.34
PTCRA-202ENST00000441198 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
PTCRA-202ENST00000441198 LTKP29376 864 aa29.64■■■□□ 2.34
PTCRA-202ENST00000441198 ABCC5O15440 1437 aa29.62■■■□□ 2.33
PTCRA-202ENST00000441198 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
PTCRA-202ENST00000441198 XIRP1Q702N8 1843 aaKnown RBP29.6■■■□□ 2.33
PTCRA-202ENST00000441198 TXNDC2Q86VQ3 553 aa29.6■■■□□ 2.33
PTCRA-202ENST00000441198 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
PTCRA-202ENST00000441198 RRP7BPQ9NSQ0 103 aa29.6■■■□□ 2.33
PTCRA-202ENST00000441198 PIK3C2BO00750 1634 aa29.6■■■□□ 2.33
PTCRA-202ENST00000441198 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
PTCRA-202ENST00000441198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.56■■■□□ 2.32
PTCRA-202ENST00000441198 DAPK1P53355 1430 aa29.54■■■□□ 2.32
PTCRA-202ENST00000441198 EID1Q9Y6B2 187 aa29.52■■■□□ 2.32
PTCRA-202ENST00000441198 TMEM2Q9UHN6 1383 aa29.52■■■□□ 2.32
PTCRA-202ENST00000441198 KANK1Q14678 1352 aa29.49■■■□□ 2.31
PTCRA-202ENST00000441198 KDM5AP29375 1690 aaKnown RBP29.48■■■□□ 2.31
PTCRA-202ENST00000441198 LMTK2Q8IWU2 1503 aa29.48■■■□□ 2.31
PTCRA-202ENST00000441198 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
PTCRA-202ENST00000441198 EFCAB6Q5THR3 1501 aa29.47■■■□□ 2.31
PTCRA-202ENST00000441198 STAG3Q9UJ98 1225 aa29.46■■■□□ 2.31
PTCRA-202ENST00000441198 IDI1Q13907 227 aa29.44■■■□□ 2.3
PTCRA-202ENST00000441198 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
PTCRA-202ENST00000441198 ANKRD30AQ9BXX3 1397 aa29.42■■■□□ 2.3
PTCRA-202ENST00000441198 APLP2Q06481 763 aa29.41■■■□□ 2.3
PTCRA-202ENST00000441198 TET3O43151 1660 aa29.4■■■□□ 2.3
PTCRA-202ENST00000441198 TMEM94Q12767 1356 aa29.39■■■□□ 2.3
PTCRA-202ENST00000441198 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
PTCRA-202ENST00000441198 NOS1P29475 1434 aa29.38■■■□□ 2.29
PTCRA-202ENST00000441198 FAM135BQ49AJ0 1406 aa29.38■■■□□ 2.29
PTCRA-202ENST00000441198 ADGRB3O60242 1522 aa29.37■■■□□ 2.29
PTCRA-202ENST00000441198 SLC26A8Q96RN1 970 aa29.37■■■□□ 2.29
PTCRA-202ENST00000441198 KCNA6P17658 529 aa29.36■■■□□ 2.29
PTCRA-202ENST00000441198 RBM33Q96EV2 1170 aaKnown RBP29.33■■■□□ 2.29
PTCRA-202ENST00000441198 ROBO1Q9Y6N7 1651 aa29.33■■■□□ 2.29
PTCRA-202ENST00000441198 ADGRL2O95490 1459 aa29.32■■■□□ 2.28
PTCRA-202ENST00000441198 NWD1Q149M9 1564 aa29.31■■■□□ 2.28
PTCRA-202ENST00000441198 PROSER2Q86WR7 435 aaPredicted RBP29.3■■■□□ 2.28
PTCRA-202ENST00000441198 NKTRP30414 1462 aaKnown RBP29.29■■■□□ 2.28
PTCRA-202ENST00000441198 SLC52A1Q9NWF4 448 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms