RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PTPRTO14522 1441 aa25.56■■□□□ 1.68
SNRPD3-204ENST00000439775 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
SNRPD3-204ENST00000439775 CAMSAP1Q5T5Y3 1602 aa25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 RNF17Q9BXT8 1623 aaKnown RBP25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 PZPP20742 1482 aa25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 SHANK2Q9UPX8 1470 aa25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 PTPN23Q9H3S7 1636 aa25.52■■□□□ 1.68
SNRPD3-204ENST00000439775 PLA2R1Q13018 1463 aa25.49■■□□□ 1.67
SNRPD3-204ENST00000439775 CERKQ8TCT0 537 aa25.49■■□□□ 1.67
SNRPD3-204ENST00000439775 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
SNRPD3-204ENST00000439775 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
SNRPD3-204ENST00000439775 FGD6Q6ZV73 1430 aa25.48■■□□□ 1.67
SNRPD3-204ENST00000439775 WASHC2CQ9Y4E1 1318 aa25.48■■□□□ 1.67
SNRPD3-204ENST00000439775 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
SNRPD3-204ENST00000439775 A2ML1A8K2U0 1454 aa25.46■■□□□ 1.67
SNRPD3-204ENST00000439775 ABCC5O15440 1437 aa25.46■■□□□ 1.67
SNRPD3-204ENST00000439775 ZC3H13Q5T200 1668 aaKnown RBP25.45■■□□□ 1.67
SNRPD3-204ENST00000439775 DNMT1P26358 1616 aaKnown RBP25.44■■□□□ 1.66
SNRPD3-204ENST00000439775 TNRQ92752 1358 aa25.44■■□□□ 1.66
SNRPD3-204ENST00000439775 ABCC3O15438 1527 aa25.43■■□□□ 1.66
SNRPD3-204ENST00000439775 MROH1Q8NDA8 1641 aa25.43■■□□□ 1.66
SNRPD3-204ENST00000439775 DAPK1P53355 1430 aa25.43■■□□□ 1.66
SNRPD3-204ENST00000439775 KIF15Q9NS87 1388 aa25.41■■□□□ 1.66
SNRPD3-204ENST00000439775 ERBINQ96RT1 1412 aa25.4■■□□□ 1.66
SNRPD3-204ENST00000439775 PKD2Q13563 968 aa25.4■■□□□ 1.66
SNRPD3-204ENST00000439775 FBXO31Q5XUX0 539 aaPredicted RBP25.4■■□□□ 1.66
SNRPD3-204ENST00000439775 NLRP1Q9C000 1473 aa25.37■■□□□ 1.65
SNRPD3-204ENST00000439775 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
SNRPD3-204ENST00000439775 PRDM15P57071 1507 aaPredicted RBP25.37■■□□□ 1.65
SNRPD3-204ENST00000439775 NCKAP5LQ9HCH0 1330 aa25.36■■□□□ 1.65
SNRPD3-204ENST00000439775 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
SNRPD3-204ENST00000439775 DEPDC5O75140 1603 aa25.31■■□□□ 1.64
SNRPD3-204ENST00000439775 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
SNRPD3-204ENST00000439775 ERVK-7P63135 1459 aa25.31■■□□□ 1.64
SNRPD3-204ENST00000439775 IQSEC2Q5JU85 1478 aa25.31■■□□□ 1.64
SNRPD3-204ENST00000439775 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
SNRPD3-204ENST00000439775 CEP152O94986 1710 aa25.3■■□□□ 1.64
SNRPD3-204ENST00000439775 UGGT1Q9NYU2 1555 aa25.29■■□□□ 1.64
SNRPD3-204ENST00000439775 ADGRL2O95490 1459 aa25.28■■□□□ 1.64
SNRPD3-204ENST00000439775 POLR1AO95602 1720 aaPredicted RBP25.28■■□□□ 1.64
SNRPD3-204ENST00000439775 ARHGAP31Q2M1Z3 1444 aa25.27■■□□□ 1.64
SNRPD3-204ENST00000439775 NEURL4Q96JN8 1562 aa25.27■■□□□ 1.64
SNRPD3-204ENST00000439775 THEMISQ8N1K5 641 aaPredicted RBP25.24■■□□□ 1.63
SNRPD3-204ENST00000439775 ZNF335Q9H4Z2 1342 aaPredicted RBP25.23■■□□□ 1.63
SNRPD3-204ENST00000439775 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
SNRPD3-204ENST00000439775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.22■■□□□ 1.63
SNRPD3-204ENST00000439775 KANK1Q14678 1352 aa25.21■■□□□ 1.63
SNRPD3-204ENST00000439775 VWDEQ8N2E2 1590 aa25.21■■□□□ 1.63
SNRPD3-204ENST00000439775 LMTK2Q8IWU2 1503 aa25.21■■□□□ 1.63
SNRPD3-204ENST00000439775 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
SNRPD3-204ENST00000439775 ANKLE2Q86XL3 938 aa25.19■■□□□ 1.62
SNRPD3-204ENST00000439775 MED14O60244 1454 aa25.19■■□□□ 1.62
SNRPD3-204ENST00000439775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.16■■□□□ 1.621e-8■■■□□ 17.8
SNRPD3-204ENST00000439775 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
SNRPD3-204ENST00000439775 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
SNRPD3-204ENST00000439775 ANKRD50Q9ULJ7 1429 aa25.13■■□□□ 1.61
SNRPD3-204ENST00000439775 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
SNRPD3-204ENST00000439775 CPS1P31327 1500 aa25.11■■□□□ 1.61
SNRPD3-204ENST00000439775 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
SNRPD3-204ENST00000439775 SLIT1O75093 1534 aa25.08■■□□□ 1.61
SNRPD3-204ENST00000439775 ARHGAP23Q9P227 1491 aa25.08■■□□□ 1.6
SNRPD3-204ENST00000439775 CFAP65Q6ZU64 1925 aaKnown RBP25.08■■□□□ 1.6
SNRPD3-204ENST00000439775 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
SNRPD3-204ENST00000439775 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
SNRPD3-204ENST00000439775 PIK3C2BO00750 1634 aa25.05■■□□□ 1.6
SNRPD3-204ENST00000439775 KDM5AP29375 1690 aaKnown RBP25.05■■□□□ 1.6
SNRPD3-204ENST00000439775 NOS1P29475 1434 aa25.04■■□□□ 1.6
SNRPD3-204ENST00000439775 RPRD2Q5VT52 1461 aaKnown RBP25.04■■□□□ 1.6
SNRPD3-204ENST00000439775 SYNMO15061 1565 aa25.04■■□□□ 1.6
SNRPD3-204ENST00000439775 UNC13BO14795 1591 aa25.02■■□□□ 1.6
SNRPD3-204ENST00000439775 TET3O43151 1660 aa25■■□□□ 1.59
SNRPD3-204ENST00000439775 UBAP1LF5GYI3 381 aa24.99■■□□□ 1.59
SNRPD3-204ENST00000439775 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
SNRPD3-204ENST00000439775 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
SNRPD3-204ENST00000439775 LTKP29376 864 aa24.96■■□□□ 1.59
SNRPD3-204ENST00000439775 IDI1Q13907 227 aa24.96■■□□□ 1.59
SNRPD3-204ENST00000439775 TXNDC2Q86VQ3 553 aa24.95■■□□□ 1.58
SNRPD3-204ENST00000439775 EID1Q9Y6B2 187 aa24.95■■□□□ 1.58
SNRPD3-204ENST00000439775 GCC2Q8IWJ2 1684 aa24.94■■□□□ 1.58
SNRPD3-204ENST00000439775 SLC52A1Q9NWF4 448 aa24.94■■□□□ 1.58
SNRPD3-204ENST00000439775 STAG3Q9UJ98 1225 aa24.94■■□□□ 1.58
SNRPD3-204ENST00000439775 PPARGC1BQ86YN6 1023 aaKnown RBP24.93■■□□□ 1.58
SNRPD3-204ENST00000439775 IQGAP3Q86VI3 1631 aa24.92■■□□□ 1.58
SNRPD3-204ENST00000439775 STRCP1A6NGW2 1772 aa24.91■■□□□ 1.58
SNRPD3-204ENST00000439775 RRBP1Q9P2E9 1410 aaKnown RBP24.9■■□□□ 1.58
SNRPD3-204ENST00000439775 LRRC7Q96NW7 1537 aa24.89■■□□□ 1.57
SNRPD3-204ENST00000439775 TOM1O60784 492 aa24.87■■□□□ 1.57
SNRPD3-204ENST00000439775 ITGAEP38570 1179 aa24.87■■□□□ 1.57
SNRPD3-204ENST00000439775 E9PCH4 1651 aa24.86■■□□□ 1.57
SNRPD3-204ENST00000439775 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
SNRPD3-204ENST00000439775 NUP155O75694 1391 aa24.82■■□□□ 1.56
SNRPD3-204ENST00000439775 TMEM131LA2VDJ0 1609 aa24.82■■□□□ 1.56
SNRPD3-204ENST00000439775 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
SNRPD3-204ENST00000439775 DISP3Q9P2K9 1392 aa24.78■■□□□ 1.56
SNRPD3-204ENST00000439775 PIP4K2BP78356 416 aa24.77■■□□□ 1.56
SNRPD3-204ENST00000439775 SCAF1Q9H7N4 1312 aaKnown RBP24.77■■□□□ 1.56
SNRPD3-204ENST00000439775 MYO5BQ9ULV0 1848 aa24.75■■□□□ 1.55
SNRPD3-204ENST00000439775 PLEKHG1Q9ULL1 1385 aa24.75■■□□□ 1.55
SNRPD3-204ENST00000439775 RIMS2Q9UQ26 1411 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms