RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
TNFRSF1A-203ENST00000437813 KDM5DQ9BY66 1539 aa22.91■■□□□ 1.26
TNFRSF1A-203ENST00000437813 TCOF1Q13428 1488 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-203ENST00000437813 KIF3BO15066 747 aa22.89■■□□□ 1.25
TNFRSF1A-203ENST00000437813 RNF17Q9BXT8 1623 aaKnown RBP22.89■■□□□ 1.25
TNFRSF1A-203ENST00000437813 PZPP20742 1482 aa22.88■■□□□ 1.25
TNFRSF1A-203ENST00000437813 A2ML1A8K2U0 1454 aa22.86■■□□□ 1.25
TNFRSF1A-203ENST00000437813 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-203ENST00000437813 MROH1Q8NDA8 1641 aa22.85■■□□□ 1.25
TNFRSF1A-203ENST00000437813 EIF2AK4Q9P2K8 1649 aaKnown RBP22.83■■□□□ 1.25
TNFRSF1A-203ENST00000437813 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
TNFRSF1A-203ENST00000437813 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
TNFRSF1A-203ENST00000437813 FBXO31Q5XUX0 539 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF1A-203ENST00000437813 NCKAP5LQ9HCH0 1330 aa22.82■■□□□ 1.24
TNFRSF1A-203ENST00000437813 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
TNFRSF1A-203ENST00000437813 PKD2Q13563 968 aa22.8■■□□□ 1.24
TNFRSF1A-203ENST00000437813 CROCC2H7BZ55 1655 aa22.8■■□□□ 1.24
TNFRSF1A-203ENST00000437813 TNRQ92752 1358 aa22.79■■□□□ 1.24
TNFRSF1A-203ENST00000437813 ABCC3O15438 1527 aa22.79■■□□□ 1.24
TNFRSF1A-203ENST00000437813 ZC3H13Q5T200 1668 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-203ENST00000437813 WASHC2CQ9Y4E1 1318 aa22.78■■□□□ 1.24
TNFRSF1A-203ENST00000437813 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
TNFRSF1A-203ENST00000437813 SHANK2Q9UPX8 1470 aa22.77■■□□□ 1.24
TNFRSF1A-203ENST00000437813 ABCC5O15440 1437 aa22.76■■□□□ 1.23
TNFRSF1A-203ENST00000437813 PTPN23Q9H3S7 1636 aa22.76■■□□□ 1.23
TNFRSF1A-203ENST00000437813 DUOX2Q9NRD8 1548 aa22.75■■□□□ 1.23
TNFRSF1A-203ENST00000437813 SPATA31D1Q6ZQQ2 1576 aa22.74■■□□□ 1.23
TNFRSF1A-203ENST00000437813 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1A-203ENST00000437813 NLRP1Q9C000 1473 aa22.73■■□□□ 1.23
TNFRSF1A-203ENST00000437813 ZNF335Q9H4Z2 1342 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1A-203ENST00000437813 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
TNFRSF1A-203ENST00000437813 PRDM15P57071 1507 aaPredicted RBP22.71■■□□□ 1.23
TNFRSF1A-203ENST00000437813 CEP152O94986 1710 aa22.7■■□□□ 1.22
TNFRSF1A-203ENST00000437813 DAPK1P53355 1430 aa22.69■■□□□ 1.22
TNFRSF1A-203ENST00000437813 DEPDC5O75140 1603 aa22.68■■□□□ 1.22
TNFRSF1A-203ENST00000437813 ERVK-7P63135 1459 aa22.68■■□□□ 1.22
TNFRSF1A-203ENST00000437813 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
TNFRSF1A-203ENST00000437813 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
TNFRSF1A-203ENST00000437813 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
TNFRSF1A-203ENST00000437813 MED14O60244 1454 aa22.66■■□□□ 1.22
TNFRSF1A-203ENST00000437813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.64■■□□□ 1.22
TNFRSF1A-203ENST00000437813 ARHGAP31Q2M1Z3 1444 aa22.64■■□□□ 1.21
TNFRSF1A-203ENST00000437813 APLP2Q06481 763 aa22.62■■□□□ 1.21
TNFRSF1A-203ENST00000437813 THEMISQ8N1K5 641 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF1A-203ENST00000437813 VWDEQ8N2E2 1590 aa22.61■■□□□ 1.21
TNFRSF1A-203ENST00000437813 UBR1Q8IWV7 1749 aa22.6■■□□□ 1.21
TNFRSF1A-203ENST00000437813 CFAP65Q6ZU64 1925 aaKnown RBP22.59■■□□□ 1.21
TNFRSF1A-203ENST00000437813 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
TNFRSF1A-203ENST00000437813 ADGRL2O95490 1459 aa22.59■■□□□ 1.21
TNFRSF1A-203ENST00000437813 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
TNFRSF1A-203ENST00000437813 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
TNFRSF1A-203ENST00000437813 CPS1P31327 1500 aa22.56■■□□□ 1.2
TNFRSF1A-203ENST00000437813 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF1A-203ENST00000437813 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
TNFRSF1A-203ENST00000437813 ARHGAP23Q9P227 1491 aa22.54■■□□□ 1.2
TNFRSF1A-203ENST00000437813 ANKRD30AQ9BXX3 1397 aa22.54■■□□□ 1.2
TNFRSF1A-203ENST00000437813 SLIT1O75093 1534 aa22.52■■□□□ 1.2
TNFRSF1A-203ENST00000437813 STRCP1A6NGW2 1772 aa22.52■■□□□ 1.2
TNFRSF1A-203ENST00000437813 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
TNFRSF1A-203ENST00000437813 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
TNFRSF1A-203ENST00000437813 PIK3C2BO00750 1634 aa22.49■■□□□ 1.19
TNFRSF1A-203ENST00000437813 KDM5AP29375 1690 aaKnown RBP22.48■■□□□ 1.19
TNFRSF1A-203ENST00000437813 SYNMO15061 1565 aa22.47■■□□□ 1.19
TNFRSF1A-203ENST00000437813 UBAP1LF5GYI3 381 aa22.47■■□□□ 1.19
TNFRSF1A-203ENST00000437813 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
TNFRSF1A-203ENST00000437813 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
TNFRSF1A-203ENST00000437813 NOS1P29475 1434 aa22.46■■□□□ 1.19
TNFRSF1A-203ENST00000437813 LTKP29376 864 aa22.45■■□□□ 1.18
TNFRSF1A-203ENST00000437813 KANK1Q14678 1352 aa22.45■■□□□ 1.18
TNFRSF1A-203ENST00000437813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.44■■□□□ 1.18
TNFRSF1A-203ENST00000437813 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
TNFRSF1A-203ENST00000437813 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
TNFRSF1A-203ENST00000437813 TMEM2Q9UHN6 1383 aa22.4■■□□□ 1.18
TNFRSF1A-203ENST00000437813 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-203ENST00000437813 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
TNFRSF1A-203ENST00000437813 IDI1Q13907 227 aa22.38■■□□□ 1.17
TNFRSF1A-203ENST00000437813 UNC13BO14795 1591 aa22.38■■□□□ 1.17
TNFRSF1A-203ENST00000437813 RPRD2Q5VT52 1461 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1A-203ENST00000437813 TET3O43151 1660 aa22.36■■□□□ 1.17
TNFRSF1A-203ENST00000437813 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
TNFRSF1A-203ENST00000437813 TXNDC2Q86VQ3 553 aa22.35■■□□□ 1.17
TNFRSF1A-203ENST00000437813 XIRP1Q702N8 1843 aaKnown RBP22.35■■□□□ 1.17
TNFRSF1A-203ENST00000437813 ADGRB3O60242 1522 aa22.35■■□□□ 1.17
TNFRSF1A-203ENST00000437813 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
TNFRSF1A-203ENST00000437813 TOM1O60784 492 aa22.32■■□□□ 1.16
TNFRSF1A-203ENST00000437813 GCC2Q8IWJ2 1684 aa22.32■■□□□ 1.16
TNFRSF1A-203ENST00000437813 HSPA1LP34931 641 aa22.29■■□□□ 1.16
TNFRSF1A-203ENST00000437813 E9PCH4 1651 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 MYO5BQ9ULV0 1848 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
TNFRSF1A-203ENST00000437813 TMEM131LA2VDJ0 1609 aa22.27■■□□□ 1.16
TNFRSF1A-203ENST00000437813 PIP4K2BP78356 416 aa22.26■■□□□ 1.15
TNFRSF1A-203ENST00000437813 NWD1Q149M9 1564 aa22.23■■□□□ 1.15
TNFRSF1A-203ENST00000437813 STAG3Q9UJ98 1225 aa22.22■■□□□ 1.15
TNFRSF1A-203ENST00000437813 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-203ENST00000437813 SCAF1Q9H7N4 1312 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-203ENST00000437813 PLEKHG1Q9ULL1 1385 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms