RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
TNFRSF1A-203ENST00000437813 CCDC180Q9P1Z9 1646 aa32.6■■■□□ 2.81
TNFRSF1A-203ENST00000437813 ABCC9O60706 1549 aa32.37■■■□□ 2.77
TNFRSF1A-203ENST00000437813 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
TNFRSF1A-203ENST00000437813 NACADO15069 1562 aa30.76■■■□□ 2.52
TNFRSF1A-203ENST00000437813 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
TNFRSF1A-203ENST00000437813 DCAF8L2P0C7V8 631 aa30.36■■■□□ 2.45
TNFRSF1A-203ENST00000437813 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
TNFRSF1A-203ENST00000437813 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
TNFRSF1A-203ENST00000437813 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
TNFRSF1A-203ENST00000437813 BICRAQ9NZM4 1560 aa30.12■■■□□ 2.41
TNFRSF1A-203ENST00000437813 PABPN1Q86U42 306 aaKnown RBP eCLIP30.12■■■□□ 2.41
TNFRSF1A-203ENST00000437813 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
TNFRSF1A-203ENST00000437813 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
TNFRSF1A-203ENST00000437813 SCRIBQ14160 1630 aa29.62■■■□□ 2.33
TNFRSF1A-203ENST00000437813 CC2D2AQ9P2K1 1620 aa29.31■■■□□ 2.28
TNFRSF1A-203ENST00000437813 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
TNFRSF1A-203ENST00000437813 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
TNFRSF1A-203ENST00000437813 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
TNFRSF1A-203ENST00000437813 SMARCA4P51532 1647 aa28.34■■■□□ 2.13
TNFRSF1A-203ENST00000437813 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
TNFRSF1A-203ENST00000437813 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
TNFRSF1A-203ENST00000437813 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
TNFRSF1A-203ENST00000437813 BAZ1AQ9NRL2 1556 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF1A-203ENST00000437813 PEG3Q9GZU2 1588 aa28.14■■■□□ 2.1
TNFRSF1A-203ENST00000437813 MROH2BQ7Z745 1585 aa28.03■■■□□ 2.08
TNFRSF1A-203ENST00000437813 BAZ1BQ9UIG0 1483 aaKnown RBP28■■■□□ 2.07
TNFRSF1A-203ENST00000437813 CUX2O14529 1486 aa27.9■■■□□ 2.06
TNFRSF1A-203ENST00000437813 NESP48681 1621 aa27.9■■■□□ 2.06
TNFRSF1A-203ENST00000437813 ERCC6Q03468 1493 aa27.87■■■□□ 2.05
TNFRSF1A-203ENST00000437813 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
TNFRSF1A-203ENST00000437813 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
TNFRSF1A-203ENST00000437813 WIZO95785 1651 aa27.67■■■□□ 2.02
TNFRSF1A-203ENST00000437813 THOC2Q8NI27 1593 aaKnown RBP27.65■■■□□ 2.02
TNFRSF1A-203ENST00000437813 KIF21AQ7Z4S6 1674 aa27.55■■■□□ 2
TNFRSF1A-203ENST00000437813 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
TNFRSF1A-203ENST00000437813 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
TNFRSF1A-203ENST00000437813 RSF1Q96T23 1441 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF1A-203ENST00000437813 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
TNFRSF1A-203ENST00000437813 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
TNFRSF1A-203ENST00000437813 WDR62O43379 1518 aa27.28■■□□□ 1.96
TNFRSF1A-203ENST00000437813 CFTRP13569 1480 aa27.27■■□□□ 1.96
TNFRSF1A-203ENST00000437813 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
TNFRSF1A-203ENST00000437813 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
TNFRSF1A-203ENST00000437813 URB2Q14146 1524 aaKnown RBP27.01■■□□□ 1.91
TNFRSF1A-203ENST00000437813 CCDC88BA6NC98 1476 aa27.01■■□□□ 1.91
TNFRSF1A-203ENST00000437813 PRDM2Q13029 1718 aa27.01■■□□□ 1.91
TNFRSF1A-203ENST00000437813 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
TNFRSF1A-203ENST00000437813 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
TNFRSF1A-203ENST00000437813 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
TNFRSF1A-203ENST00000437813 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
TNFRSF1A-203ENST00000437813 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
TNFRSF1A-203ENST00000437813 OSCARQ8IYS5 282 aa26.55■■□□□ 1.84
TNFRSF1A-203ENST00000437813 TARBP1Q13395 1621 aaKnown RBP26.53■■□□□ 1.84
TNFRSF1A-203ENST00000437813 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
TNFRSF1A-203ENST00000437813 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
TNFRSF1A-203ENST00000437813 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
TNFRSF1A-203ENST00000437813 AQRO60306 1485 aaKnown RBP eCLIP26.37■■□□□ 1.812e-6■■■□□ 16.9
TNFRSF1A-203ENST00000437813 CUX1P39880 1505 aa26.33■■□□□ 1.81
TNFRSF1A-203ENST00000437813 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
TNFRSF1A-203ENST00000437813 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
TNFRSF1A-203ENST00000437813 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
TNFRSF1A-203ENST00000437813 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
TNFRSF1A-203ENST00000437813 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
TNFRSF1A-203ENST00000437813 SOGA1O94964 1423 aa26.27■■□□□ 1.8
TNFRSF1A-203ENST00000437813 CHD1O14646 1710 aa26.27■■□□□ 1.8
TNFRSF1A-203ENST00000437813 WDR97A6NE52 1622 aa26.23■■□□□ 1.79
TNFRSF1A-203ENST00000437813 ARHGEF11O15085 1522 aa26.22■■□□□ 1.79
TNFRSF1A-203ENST00000437813 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
TNFRSF1A-203ENST00000437813 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
TNFRSF1A-203ENST00000437813 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
TNFRSF1A-203ENST00000437813 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
TNFRSF1A-203ENST00000437813 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
TNFRSF1A-203ENST00000437813 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
TNFRSF1A-203ENST00000437813 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
TNFRSF1A-203ENST00000437813 FBLN2P98095 1184 aa26.01■■□□□ 1.75
TNFRSF1A-203ENST00000437813 ABCA5Q8WWZ7 1642 aa26■■□□□ 1.75
TNFRSF1A-203ENST00000437813 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
TNFRSF1A-203ENST00000437813 PBRM1Q86U86 1689 aa25.98■■□□□ 1.75
TNFRSF1A-203ENST00000437813 GAPVD1Q14C86 1478 aa25.98■■□□□ 1.75
TNFRSF1A-203ENST00000437813 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
TNFRSF1A-203ENST00000437813 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
TNFRSF1A-203ENST00000437813 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
TNFRSF1A-203ENST00000437813 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
TNFRSF1A-203ENST00000437813 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.74
TNFRSF1A-203ENST00000437813 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.74
TNFRSF1A-203ENST00000437813 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
TNFRSF1A-203ENST00000437813 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
TNFRSF1A-203ENST00000437813 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
TNFRSF1A-203ENST00000437813 NUP160Q12769 1436 aa25.7■■□□□ 1.7
TNFRSF1A-203ENST00000437813 ERICH3Q5RHP9 1530 aa25.68■■□□□ 1.7
TNFRSF1A-203ENST00000437813 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
TNFRSF1A-203ENST00000437813 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
TNFRSF1A-203ENST00000437813 ERCC6L2Q5T890 1561 aa25.61■■□□□ 1.69
TNFRSF1A-203ENST00000437813 SHROOM2Q13796 1616 aa25.6■■□□□ 1.69
TNFRSF1A-203ENST00000437813 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF1A-203ENST00000437813 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
TNFRSF1A-203ENST00000437813 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
TNFRSF1A-203ENST00000437813 IGF1RP08069 1367 aa25.39■■□□□ 1.65
TNFRSF1A-203ENST00000437813 PRG4Q92954 1404 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms