RNA–Protein interactions for RNA: ENST00000434760.5

NUP50-210, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-210ENST00000434760 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
NUP50-210ENST00000434760 TCOF1Q13428 1488 aaKnown RBP24.87■■□□□ 1.57
NUP50-210ENST00000434760 GGT6Q6P531 493 aa24.86■■□□□ 1.57
NUP50-210ENST00000434760 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
NUP50-210ENST00000434760 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
NUP50-210ENST00000434760 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
NUP50-210ENST00000434760 PZPP20742 1482 aa24.83■■□□□ 1.57
NUP50-210ENST00000434760 ABCC3O15438 1527 aa24.81■■□□□ 1.56
NUP50-210ENST00000434760 DUOX2Q9NRD8 1548 aa24.81■■□□□ 1.56
NUP50-210ENST00000434760 CEP152O94986 1710 aa24.81■■□□□ 1.56
NUP50-210ENST00000434760 ABCC5O15440 1437 aa24.8■■□□□ 1.56
NUP50-210ENST00000434760 KIF3BO15066 747 aa24.8■■□□□ 1.56
NUP50-210ENST00000434760 PTPRTO14522 1441 aa24.79■■□□□ 1.56
NUP50-210ENST00000434760 PLA2R1Q13018 1463 aa24.79■■□□□ 1.56
NUP50-210ENST00000434760 PRDM15P57071 1507 aaPredicted RBP24.78■■□□□ 1.56
NUP50-210ENST00000434760 TSPY4P0CV99 314 aa24.78■■□□□ 1.56
NUP50-210ENST00000434760 TSPY10P0CW01 314 aa24.78■■□□□ 1.56
NUP50-210ENST00000434760 DEPDC5O75140 1603 aa24.78■■□□□ 1.56
NUP50-210ENST00000434760 DAPK1P53355 1430 aa24.78■■□□□ 1.56
NUP50-210ENST00000434760 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
NUP50-210ENST00000434760 FBXO41Q8TF61 875 aa24.75■■□□□ 1.55
NUP50-210ENST00000434760 POLR1AO95602 1720 aaPredicted RBP24.75■■□□□ 1.55
NUP50-210ENST00000434760 APLP2Q06481 763 aa24.73■■□□□ 1.55
NUP50-210ENST00000434760 SPATA31D1Q6ZQQ2 1576 aa24.72■■□□□ 1.55
NUP50-210ENST00000434760 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
NUP50-210ENST00000434760 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
NUP50-210ENST00000434760 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
NUP50-210ENST00000434760 TNRQ92752 1358 aa24.69■■□□□ 1.54
NUP50-210ENST00000434760 NEURL4Q96JN8 1562 aa24.69■■□□□ 1.54
NUP50-210ENST00000434760 DMRT2Q9Y5R5 561 aa24.68■■□□□ 1.54
NUP50-210ENST00000434760 ADGRL2O95490 1459 aa24.67■■□□□ 1.54
NUP50-210ENST00000434760 WASHC2CQ9Y4E1 1318 aa24.66■■□□□ 1.54
NUP50-210ENST00000434760 ERVK-7P63135 1459 aa24.65■■□□□ 1.54
NUP50-210ENST00000434760 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
NUP50-210ENST00000434760 FBXO31Q5XUX0 539 aaPredicted RBP24.64■■□□□ 1.54
NUP50-210ENST00000434760 CERKQ8TCT0 537 aa24.64■■□□□ 1.54
NUP50-210ENST00000434760 VWDEQ8N2E2 1590 aa24.63■■□□□ 1.53
NUP50-210ENST00000434760 CFAP65Q6ZU64 1925 aaKnown RBP24.61■■□□□ 1.53
NUP50-210ENST00000434760 UGGT1Q9NYU2 1555 aa24.59■■□□□ 1.53
NUP50-210ENST00000434760 UBR1Q8IWV7 1749 aa24.58■■□□□ 1.53
NUP50-210ENST00000434760 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.53
NUP50-210ENST00000434760 NCKAP5LQ9HCH0 1330 aa24.58■■□□□ 1.52
NUP50-210ENST00000434760 ARHGAP31Q2M1Z3 1444 aa24.57■■□□□ 1.52
NUP50-210ENST00000434760 ANKRD30AQ9BXX3 1397 aa24.56■■□□□ 1.52
NUP50-210ENST00000434760 IQSEC2Q5JU85 1478 aa24.56■■□□□ 1.52
NUP50-210ENST00000434760 PKD2Q13563 968 aa24.55■■□□□ 1.52
NUP50-210ENST00000434760 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
NUP50-210ENST00000434760 EFCAB6Q5THR3 1501 aa24.53■■□□□ 1.52
NUP50-210ENST00000434760 IQGAP1P46940 1657 aa24.51■■□□□ 1.51
NUP50-210ENST00000434760 UNC13BO14795 1591 aa24.5■■□□□ 1.51
NUP50-210ENST00000434760 MED14O60244 1454 aa24.49■■□□□ 1.51
NUP50-210ENST00000434760 PIK3C2BO00750 1634 aa24.49■■□□□ 1.51
NUP50-210ENST00000434760 SYNMO15061 1565 aa24.48■■□□□ 1.51
NUP50-210ENST00000434760 KDM5AP29375 1690 aaKnown RBP24.48■■□□□ 1.51
NUP50-210ENST00000434760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.48■■□□□ 1.51
NUP50-210ENST00000434760 CHIC2Q9UKJ5 165 aa24.48■■□□□ 1.51
NUP50-210ENST00000434760 ZNF335Q9H4Z2 1342 aaPredicted RBP24.47■■□□□ 1.51
NUP50-210ENST00000434760 TET3O43151 1660 aa24.45■■□□□ 1.5
NUP50-210ENST00000434760 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
NUP50-210ENST00000434760 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
NUP50-210ENST00000434760 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
NUP50-210ENST00000434760 SLIT1O75093 1534 aa24.43■■□□□ 1.5
NUP50-210ENST00000434760 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
NUP50-210ENST00000434760 KANK1Q14678 1352 aa24.42■■□□□ 1.5
NUP50-210ENST00000434760 NPHP4O75161 1426 aaPredicted RBP24.41■■□□□ 1.5
NUP50-210ENST00000434760 STRCP1A6NGW2 1772 aa24.41■■□□□ 1.5
NUP50-210ENST00000434760 NOS1P29475 1434 aa24.39■■□□□ 1.5
NUP50-210ENST00000434760 CPS1P31327 1500 aa24.39■■□□□ 1.49
NUP50-210ENST00000434760 ROCK1Q13464 1354 aa24.39■■□□□ 1.49
NUP50-210ENST00000434760 THEMISQ8N1K5 641 aaPredicted RBP24.38■■□□□ 1.49
NUP50-210ENST00000434760 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
NUP50-210ENST00000434760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.37■■□□□ 1.492e-6■■■□□ 16.3
NUP50-210ENST00000434760 RPRD2Q5VT52 1461 aaKnown RBP24.37■■□□□ 1.49
NUP50-210ENST00000434760 SCAF11Q99590 1463 aaKnown RBP24.37■■□□□ 1.49
NUP50-210ENST00000434760 ADGRB3O60242 1522 aa24.36■■□□□ 1.49
NUP50-210ENST00000434760 E9PCH4 1651 aa24.34■■□□□ 1.49
NUP50-210ENST00000434760 ANKLE2Q86XL3 938 aa24.34■■□□□ 1.49
NUP50-210ENST00000434760 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.49
NUP50-210ENST00000434760 RRBP1Q9P2E9 1410 aaKnown RBP24.3■■□□□ 1.48
NUP50-210ENST00000434760 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
NUP50-210ENST00000434760 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
NUP50-210ENST00000434760 TMEM2Q9UHN6 1383 aa24.26■■□□□ 1.47
NUP50-210ENST00000434760 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
NUP50-210ENST00000434760 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
NUP50-210ENST00000434760 LTKP29376 864 aa24.22■■□□□ 1.47
NUP50-210ENST00000434760 IDI1Q13907 227 aa24.21■■□□□ 1.47
NUP50-210ENST00000434760 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
NUP50-210ENST00000434760 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
NUP50-210ENST00000434760 ZFYVE9O95405 1425 aa24.18■■□□□ 1.46
NUP50-210ENST00000434760 NWD1Q149M9 1564 aa24.16■■□□□ 1.46
NUP50-210ENST00000434760 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
NUP50-210ENST00000434760 TXNDC2Q86VQ3 553 aa24.14■■□□□ 1.45
NUP50-210ENST00000434760 SLC52A1Q9NWF4 448 aa24.14■■□□□ 1.45
NUP50-210ENST00000434760 ITGAEP38570 1179 aa24.13■■□□□ 1.45
NUP50-210ENST00000434760 NAIPQ13075 1403 aa24.11■■□□□ 1.45
NUP50-210ENST00000434760 NUP155O75694 1391 aa24.1■■□□□ 1.45
NUP50-210ENST00000434760 EID1Q9Y6B2 187 aa24.09■■□□□ 1.45
NUP50-210ENST00000434760 STAG3Q9UJ98 1225 aa24.08■■□□□ 1.45
NUP50-210ENST00000434760 RIMS2Q9UQ26 1411 aa24.06■■□□□ 1.44
NUP50-210ENST00000434760 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms