RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 RSPH4AQ5TD94 716 aa35.65■■■■□ 3.3
PTPRA-207ENST00000431048 FAM135AQ9P2D6 1515 aa35.65■■■■□ 3.3
PTPRA-207ENST00000431048 KIF3BO15066 747 aa35.64■■■■□ 3.3
PTPRA-207ENST00000431048 FBXO31Q5XUX0 539 aaPredicted RBP35.64■■■■□ 3.3
PTPRA-207ENST00000431048 PZPP20742 1482 aa35.61■■■■□ 3.29
PTPRA-207ENST00000431048 CPS1P31327 1500 aa35.61■■■■□ 3.29
PTPRA-207ENST00000431048 TOM1O60784 492 aa35.6■■■■□ 3.29
PTPRA-207ENST00000431048 SHANK2Q9UPX8 1470 aa35.58■■■■□ 3.29
PTPRA-207ENST00000431048 KDM5DQ9BY66 1539 aa35.57■■■■□ 3.29
PTPRA-207ENST00000431048 NEURL4Q96JN8 1562 aa35.57■■■■□ 3.28
PTPRA-207ENST00000431048 CCDC141Q6ZP82 1450 aa35.57■■■■□ 3.28
PTPRA-207ENST00000431048 ANKLE2Q86XL3 938 aa35.57■■■■□ 3.28
PTPRA-207ENST00000431048 WASHC2CQ9Y4E1 1318 aa35.57■■■■□ 3.28
PTPRA-207ENST00000431048 THEMISQ8N1K5 641 aaPredicted RBP35.56■■■■□ 3.28
PTPRA-207ENST00000431048 HSPA1LP34931 641 aa35.55■■■■□ 3.28
PTPRA-207ENST00000431048 MIA2Q96PC5 1412 aa35.54■■■■□ 3.28
PTPRA-207ENST00000431048 POLR1AO95602 1720 aaPredicted RBP35.54■■■■□ 3.28
PTPRA-207ENST00000431048 NLRP1Q9C000 1473 aa35.51■■■■□ 3.28
PTPRA-207ENST00000431048 PIP4K2BP78356 416 aa35.5■■■■□ 3.27
PTPRA-207ENST00000431048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.5■■■■□ 3.27
PTPRA-207ENST00000431048 CAMSAP2Q08AD1 1489 aa35.48■■■■□ 3.27
PTPRA-207ENST00000431048 SCAF1Q9H7N4 1312 aaKnown RBP35.48■■■■□ 3.27
PTPRA-207ENST00000431048 MED14O60244 1454 aa35.48■■■■□ 3.27
PTPRA-207ENST00000431048 NCOA2Q15596 1464 aa35.47■■■■□ 3.27
PTPRA-207ENST00000431048 VWDEQ8N2E2 1590 aa35.44■■■■□ 3.26
PTPRA-207ENST00000431048 TSPY4P0CV99 314 aa35.44■■■■□ 3.26
PTPRA-207ENST00000431048 TSPY10P0CW01 314 aa35.44■■■■□ 3.26
PTPRA-207ENST00000431048 UGGT1Q9NYU2 1555 aa35.42■■■■□ 3.26
PTPRA-207ENST00000431048 NPHP4O75161 1426 aaPredicted RBP35.42■■■■□ 3.26
PTPRA-207ENST00000431048 DEPDC5O75140 1603 aa35.42■■■■□ 3.26
PTPRA-207ENST00000431048 ARHGEF5Q12774 1597 aa35.41■■■■□ 3.26
PTPRA-207ENST00000431048 MED1Q15648 1581 aaPredicted RBP35.41■■■■□ 3.26
PTPRA-207ENST00000431048 ALKQ9UM73 1620 aa35.31■■■■□ 3.24
PTPRA-207ENST00000431048 RNF17Q9BXT8 1623 aaKnown RBP35.28■■■■□ 3.24
PTPRA-207ENST00000431048 IQGAP1P46940 1657 aa35.27■■■■□ 3.24
PTPRA-207ENST00000431048 ABCC3O15438 1527 aa35.27■■■■□ 3.24
PTPRA-207ENST00000431048 MAST1Q9Y2H9 1570 aa35.25■■■■□ 3.23
PTPRA-207ENST00000431048 ZC3H13Q5T200 1668 aaKnown RBP35.24■■■■□ 3.23
PTPRA-207ENST00000431048 LRRC7Q96NW7 1537 aa35.23■■■■□ 3.23
PTPRA-207ENST00000431048 ERVK-7P63135 1459 aa35.22■■■■□ 3.23
PTPRA-207ENST00000431048 PHF23Q9BUL5 403 aaPredicted RBP35.19■■■■□ 3.22
PTPRA-207ENST00000431048 EIF2AK4Q9P2K8 1649 aaKnown RBP35.19■■■■□ 3.22
PTPRA-207ENST00000431048 LRRC9Q6ZRR7 1453 aa35.18■■■■□ 3.22
PTPRA-207ENST00000431048 STRCP1A6NGW2 1772 aa35.17■■■■□ 3.22
PTPRA-207ENST00000431048 SYNMO15061 1565 aa35.14■■■■□ 3.22
PTPRA-207ENST00000431048 MROH1Q8NDA8 1641 aa35.13■■■■□ 3.21
PTPRA-207ENST00000431048 SCAF11Q99590 1463 aaKnown RBP35.09■■■■□ 3.21
PTPRA-207ENST00000431048 UBR1Q8IWV7 1749 aa35.08■■■■□ 3.21
PTPRA-207ENST00000431048 ARHGAP23Q9P227 1491 aa35.08■■■■□ 3.21
PTPRA-207ENST00000431048 ARHGAP31Q2M1Z3 1444 aa35.07■■■■□ 3.21
PTPRA-207ENST00000431048 VPS8Q8N3P4 1428 aa35.07■■■■□ 3.21
PTPRA-207ENST00000431048 LTKP29376 864 aa35.07■■■■□ 3.2
PTPRA-207ENST00000431048 MYOM3Q5VTT5 1437 aa35.06■■■■□ 3.2
PTPRA-207ENST00000431048 DUOX2Q9NRD8 1548 aa35.06■■■■□ 3.2
PTPRA-207ENST00000431048 TXNDC2Q86VQ3 553 aa35.06■■■■□ 3.2
PTPRA-207ENST00000431048 SLIT1O75093 1534 aa35.06■■■■□ 3.2
PTPRA-207ENST00000431048 MAP3K1Q13233 1512 aa35.04■■■■□ 3.2
PTPRA-207ENST00000431048 KANK4Q5T7N3 995 aaPredicted RBP35.02■■■■□ 3.2
PTPRA-207ENST00000431048 CEP152O94986 1710 aa35.01■■■■□ 3.2
PTPRA-207ENST00000431048 EID1Q9Y6B2 187 aa35■■■■□ 3.19
PTPRA-207ENST00000431048 CFAP65Q6ZU64 1925 aaKnown RBP34.99■■■■□ 3.19
PTPRA-207ENST00000431048 SENP3Q9H4L4 574 aaPredicted RBP34.98■■■■□ 3.19
PTPRA-207ENST00000431048 KIF15Q9NS87 1388 aa34.95■■■■□ 3.19
PTPRA-207ENST00000431048 PRDM15P57071 1507 aaPredicted RBP34.95■■■■□ 3.19
PTPRA-207ENST00000431048 ERBINQ96RT1 1412 aa34.94■■■■□ 3.18
PTPRA-207ENST00000431048 TMEM2Q9UHN6 1383 aa34.92■■■■□ 3.18
PTPRA-207ENST00000431048 RGS17Q9UGC6 210 aaPredicted RBP34.92■■■■□ 3.18
PTPRA-207ENST00000431048 FAM135BQ49AJ0 1406 aa34.91■■■■□ 3.18
PTPRA-207ENST00000431048 ABCC5O15440 1437 aa34.89■■■■□ 3.18
PTPRA-207ENST00000431048 RRP7BPQ9NSQ0 103 aa34.88■■■■□ 3.17
PTPRA-207ENST00000431048 XIRP1Q702N8 1843 aaKnown RBP34.88■■■■□ 3.17
PTPRA-207ENST00000431048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.84■■■■□ 3.172e-8■□□□□ 8.8
PTPRA-207ENST00000431048 STAG3Q9UJ98 1225 aa34.84■■■■□ 3.17
PTPRA-207ENST00000431048 KANK1Q14678 1352 aa34.84■■■■□ 3.17
PTPRA-207ENST00000431048 PIK3C2BO00750 1634 aa34.84■■■■□ 3.17
PTPRA-207ENST00000431048 KCNA6P17658 529 aa34.83■■■■□ 3.17
PTPRA-207ENST00000431048 IDI1Q13907 227 aa34.81■■■■□ 3.16
PTPRA-207ENST00000431048 KDM5AP29375 1690 aaKnown RBP34.81■■■■□ 3.16
PTPRA-207ENST00000431048 TMEM94Q12767 1356 aa34.8■■■■□ 3.16
PTPRA-207ENST00000431048 LOC105371045A0A1W2PR82 267 aa34.8■■■■□ 3.16
PTPRA-207ENST00000431048 LMTK2Q8IWU2 1503 aa34.79■■■■□ 3.16
PTPRA-207ENST00000431048 EFCAB6Q5THR3 1501 aa34.77■■■■□ 3.16
PTPRA-207ENST00000431048 CROCC2H7BZ55 1655 aa34.77■■■■□ 3.16
PTPRA-207ENST00000431048 DAPK1P53355 1430 aa34.75■■■■□ 3.15
PTPRA-207ENST00000431048 TET3O43151 1660 aa34.75■■■■□ 3.15
PTPRA-207ENST00000431048 PTPN23Q9H3S7 1636 aa34.73■■■■□ 3.15
PTPRA-207ENST00000431048 PROSER2Q86WR7 435 aaPredicted RBP34.73■■■■□ 3.15
PTPRA-207ENST00000431048 SLC26A8Q96RN1 970 aa34.71■■■■□ 3.15
PTPRA-207ENST00000431048 NOS1P29475 1434 aa34.71■■■■□ 3.15
PTPRA-207ENST00000431048 ANKRD30AQ9BXX3 1397 aa34.7■■■■□ 3.15
PTPRA-207ENST00000431048 SLC52A1Q9NWF4 448 aa34.69■■■■□ 3.14
PTPRA-207ENST00000431048 POTEAQ6S8J7 498 aa34.67■■■■□ 3.14
PTPRA-207ENST00000431048 NKTRP30414 1462 aaKnown RBP34.65■■■■□ 3.14
PTPRA-207ENST00000431048 FGD6Q6ZV73 1430 aa34.64■■■■□ 3.14
PTPRA-207ENST00000431048 APLP2Q06481 763 aa34.63■■■■□ 3.13
PTPRA-207ENST00000431048 CHIC2Q9UKJ5 165 aa34.63■■■■□ 3.13
PTPRA-207ENST00000431048 ROBO1Q9Y6N7 1651 aa34.63■■■■□ 3.13
PTPRA-207ENST00000431048 RBM33Q96EV2 1170 aaKnown RBP34.61■■■■□ 3.13
PTPRA-207ENST00000431048 NWD1Q149M9 1564 aa34.61■■■■□ 3.13
PTPRA-207ENST00000431048 ADGRB3O60242 1522 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms