RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 TCOF1Q13428 1488 aaKnown RBP27.62■■■□□ 2.01
DDR1-235ENST00000428153 KDM5DQ9BY66 1539 aa27.62■■■□□ 2.01
DDR1-235ENST00000428153 KIF3BO15066 747 aa27.61■■■□□ 2.01
DDR1-235ENST00000428153 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
DDR1-235ENST00000428153 A2ML1A8K2U0 1454 aa27.59■■■□□ 2.01
DDR1-235ENST00000428153 MIA2Q96PC5 1412 aa27.58■■■□□ 2.01
DDR1-235ENST00000428153 PZPP20742 1482 aa27.57■■■□□ 2
DDR1-235ENST00000428153 MAST1Q9Y2H9 1570 aa27.57■■■□□ 2
DDR1-235ENST00000428153 NCKAP5LQ9HCH0 1330 aa27.55■■■□□ 2
DDR1-235ENST00000428153 WASHC2CQ9Y4E1 1318 aa27.53■■■□□ 2
DDR1-235ENST00000428153 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
DDR1-235ENST00000428153 MYOM3Q5VTT5 1437 aa27.52■■■□□ 2
DDR1-235ENST00000428153 TNRQ92752 1358 aa27.52■■■□□ 2
DDR1-235ENST00000428153 KANK4Q5T7N3 995 aaPredicted RBP27.5■■□□□ 1.99
DDR1-235ENST00000428153 RNF17Q9BXT8 1623 aaKnown RBP27.49■■□□□ 1.99
DDR1-235ENST00000428153 EIF2AK4Q9P2K8 1649 aaKnown RBP27.48■■□□□ 1.99
DDR1-235ENST00000428153 NLRP1Q9C000 1473 aa27.46■■□□□ 1.99
DDR1-235ENST00000428153 FBXO31Q5XUX0 539 aaPredicted RBP27.45■■□□□ 1.98
DDR1-235ENST00000428153 ZC3H13Q5T200 1668 aaKnown RBP27.45■■□□□ 1.98
DDR1-235ENST00000428153 ZNF335Q9H4Z2 1342 aaPredicted RBP27.44■■□□□ 1.98
DDR1-235ENST00000428153 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
DDR1-235ENST00000428153 THEMISQ8N1K5 641 aaPredicted RBP27.4■■□□□ 1.98
DDR1-235ENST00000428153 ABCC3O15438 1527 aa27.4■■□□□ 1.98
DDR1-235ENST00000428153 DUOX2Q9NRD8 1548 aa27.4■■□□□ 1.98
DDR1-235ENST00000428153 SHANK2Q9UPX8 1470 aa27.38■■□□□ 1.97
DDR1-235ENST00000428153 APLP2Q06481 763 aa27.37■■□□□ 1.97
DDR1-235ENST00000428153 SPATA31D1Q6ZQQ2 1576 aa27.37■■□□□ 1.97
DDR1-235ENST00000428153 NEURL4Q96JN8 1562 aa27.36■■□□□ 1.97
DDR1-235ENST00000428153 UGGT1Q9NYU2 1555 aa27.36■■□□□ 1.97
DDR1-235ENST00000428153 MROH1Q8NDA8 1641 aa27.35■■□□□ 1.97
DDR1-235ENST00000428153 ANKLE2Q86XL3 938 aa27.35■■□□□ 1.97
DDR1-235ENST00000428153 DEPDC5O75140 1603 aa27.34■■□□□ 1.97
DDR1-235ENST00000428153 MED14O60244 1454 aa27.33■■□□□ 1.97
DDR1-235ENST00000428153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.96
DDR1-235ENST00000428153 ERBINQ96RT1 1412 aa27.32■■□□□ 1.96
DDR1-235ENST00000428153 CPS1P31327 1500 aa27.31■■□□□ 1.96
DDR1-235ENST00000428153 PTPN23Q9H3S7 1636 aa27.31■■□□□ 1.96
DDR1-235ENST00000428153 ABCC5O15440 1437 aa27.31■■□□□ 1.96
DDR1-235ENST00000428153 ERVK-7P63135 1459 aa27.31■■□□□ 1.96
DDR1-235ENST00000428153 CROCC2H7BZ55 1655 aa27.3■■□□□ 1.96
DDR1-235ENST00000428153 KIF15Q9NS87 1388 aa27.3■■□□□ 1.96
DDR1-235ENST00000428153 PRDM15P57071 1507 aaPredicted RBP27.28■■□□□ 1.96
DDR1-235ENST00000428153 UBAP1LF5GYI3 381 aa27.28■■□□□ 1.96
DDR1-235ENST00000428153 ARHGAP31Q2M1Z3 1444 aa27.27■■□□□ 1.96
DDR1-235ENST00000428153 FGD6Q6ZV73 1430 aa27.27■■□□□ 1.96
DDR1-235ENST00000428153 DAPK1P53355 1430 aa27.25■■□□□ 1.95
DDR1-235ENST00000428153 DISP3Q9P2K9 1392 aa27.25■■□□□ 1.95
DDR1-235ENST00000428153 NPHP4O75161 1426 aaPredicted RBP27.24■■□□□ 1.95
DDR1-235ENST00000428153 CEP152O94986 1710 aa27.24■■□□□ 1.95
DDR1-235ENST00000428153 VWDEQ8N2E2 1590 aa27.22■■□□□ 1.95
DDR1-235ENST00000428153 IQGAP1P46940 1657 aa27.2■■□□□ 1.94
DDR1-235ENST00000428153 RRP7BPQ9NSQ0 103 aa27.19■■□□□ 1.94
DDR1-235ENST00000428153 ANKRD30AQ9BXX3 1397 aa27.18■■□□□ 1.94
DDR1-235ENST00000428153 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
DDR1-235ENST00000428153 KANK1Q14678 1352 aa27.16■■□□□ 1.94
DDR1-235ENST00000428153 TOM1O60784 492 aa27.15■■□□□ 1.94
DDR1-235ENST00000428153 LMTK2Q8IWU2 1503 aa27.14■■□□□ 1.94
DDR1-235ENST00000428153 SLIT1O75093 1534 aa27.13■■□□□ 1.93
DDR1-235ENST00000428153 CFAP65Q6ZU64 1925 aaKnown RBP27.13■■□□□ 1.93
DDR1-235ENST00000428153 ARHGAP23Q9P227 1491 aa27.13■■□□□ 1.93
DDR1-235ENST00000428153 ADGRL2O95490 1459 aa27.11■■□□□ 1.93
DDR1-235ENST00000428153 SCAF11Q99590 1463 aaKnown RBP27.11■■□□□ 1.93
DDR1-235ENST00000428153 KDM5AP29375 1690 aaKnown RBP27.08■■□□□ 1.92
DDR1-235ENST00000428153 SYNMO15061 1565 aa27.07■■□□□ 1.92
DDR1-235ENST00000428153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.07■■□□□ 1.92
DDR1-235ENST00000428153 ILDR2Q71H61 639 aa27.06■■□□□ 1.92
DDR1-235ENST00000428153 CHIC2Q9UKJ5 165 aa27.04■■□□□ 1.92
DDR1-235ENST00000428153 LRRC7Q96NW7 1537 aa27.02■■□□□ 1.92
DDR1-235ENST00000428153 LTKP29376 864 aa27.02■■□□□ 1.92
DDR1-235ENST00000428153 TXNDC2Q86VQ3 553 aa27.02■■□□□ 1.92
DDR1-235ENST00000428153 EID1Q9Y6B2 187 aa27.02■■□□□ 1.92
DDR1-235ENST00000428153 PIK3C2BO00750 1634 aa27.01■■□□□ 1.92
DDR1-235ENST00000428153 TMEM2Q9UHN6 1383 aa27.01■■□□□ 1.91
DDR1-235ENST00000428153 SOCS7O14512 581 aa27.01■■□□□ 1.91
DDR1-235ENST00000428153 STRCP1A6NGW2 1772 aa27.01■■□□□ 1.91
DDR1-235ENST00000428153 EFCAB6Q5THR3 1501 aa27■■□□□ 1.91
DDR1-235ENST00000428153 NOS1P29475 1434 aa26.99■■□□□ 1.91
DDR1-235ENST00000428153 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
DDR1-235ENST00000428153 ALKQ9UM73 1620 aa26.98■■□□□ 1.91
DDR1-235ENST00000428153 SCAF1Q9H7N4 1312 aaKnown RBP26.98■■□□□ 1.91
DDR1-235ENST00000428153 ANKRD50Q9ULJ7 1429 aa26.98■■□□□ 1.91
DDR1-235ENST00000428153 HSPA1LP34931 641 aa26.97■■□□□ 1.91
DDR1-235ENST00000428153 RPRD2Q5VT52 1461 aaKnown RBP26.97■■□□□ 1.91
DDR1-235ENST00000428153 IDI1Q13907 227 aa26.96■■□□□ 1.91
DDR1-235ENST00000428153 STAG3Q9UJ98 1225 aa26.96■■□□□ 1.91
DDR1-235ENST00000428153 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
DDR1-235ENST00000428153 SLC52A1Q9NWF4 448 aa26.95■■□□□ 1.9
DDR1-235ENST00000428153 ADGRB3O60242 1522 aa26.9■■□□□ 1.9
DDR1-235ENST00000428153 TET3O43151 1660 aa26.87■■□□□ 1.89
DDR1-235ENST00000428153 ROCK1Q13464 1354 aa26.86■■□□□ 1.89
DDR1-235ENST00000428153 MED1Q15648 1581 aaPredicted RBP26.85■■□□□ 1.89
DDR1-235ENST00000428153 UNC13BO14795 1591 aa26.84■■□□□ 1.89
DDR1-235ENST00000428153 GCC2Q8IWJ2 1684 aa26.82■■□□□ 1.88
DDR1-235ENST00000428153 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
DDR1-235ENST00000428153 KCNA6P17658 529 aa26.81■■□□□ 1.88
DDR1-235ENST00000428153 ZFYVE9O95405 1425 aa26.77■■□□□ 1.88
DDR1-235ENST00000428153 HDGFP51858 240 aaKnown RBP26.77■■□□□ 1.88
DDR1-235ENST00000428153 NKTRP30414 1462 aaKnown RBP26.76■■□□□ 1.87
DDR1-235ENST00000428153 NWD1Q149M9 1564 aa26.75■■□□□ 1.87
DDR1-235ENST00000428153 FAM135BQ49AJ0 1406 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms