RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 TRAPPC8Q9Y2L5 1435 aa26.6■■□□□ 1.85
SNX17-202ENST00000427123 TRPM1Q7Z4N2 1603 aa26.59■■□□□ 1.85
SNX17-202ENST00000427123 ATP10AO60312 1499 aa26.58■■□□□ 1.85
SNX17-202ENST00000427123 ABCA9Q8IUA7 1624 aa26.58■■□□□ 1.85
SNX17-202ENST00000427123 DCAF11Q8TEB1 546 aa26.58■■□□□ 1.85
SNX17-202ENST00000427123 CARD11Q9BXL7 1154 aa26.58■■□□□ 1.85
SNX17-202ENST00000427123 RTEL1-TNFRSF6BF6WH68 1400 aa26.57■■□□□ 1.84
SNX17-202ENST00000427123 ZFYVE16Q7Z3T8 1539 aa26.57■■□□□ 1.84
SNX17-202ENST00000427123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.56■■□□□ 1.842e-6■□□□□ 10.1
SNX17-202ENST00000427123 ROCK2O75116 1388 aaKnown RBP26.55■■□□□ 1.84
SNX17-202ENST00000427123 PRAG1Q86YV5 1406 aa26.55■■□□□ 1.84
SNX17-202ENST00000427123 HNRNPUQ00839 825 aaKnown RBP eCLIP26.55■■□□□ 1.84
SNX17-202ENST00000427123 KDM2AQ9Y2K7 1162 aa26.54■■□□□ 1.84
SNX17-202ENST00000427123 DHX29Q7Z478 1369 aaKnown RBP26.54■■□□□ 1.84
SNX17-202ENST00000427123 LAMC1P11047 1609 aa26.53■■□□□ 1.84
SNX17-202ENST00000427123 A2MP01023 1474 aa26.52■■□□□ 1.84
SNX17-202ENST00000427123 EIF2AK4Q9P2K8 1649 aaKnown RBP26.51■■□□□ 1.83
SNX17-202ENST00000427123 SPAG9O60271 1321 aaKnown RBP26.5■■□□□ 1.83
SNX17-202ENST00000427123 INO80Q9ULG1 1556 aaPredicted RBP26.5■■□□□ 1.83
SNX17-202ENST00000427123 NEFLP07196 543 aa26.49■■□□□ 1.83
SNX17-202ENST00000427123 DEPDC5O75140 1603 aa26.49■■□□□ 1.83
SNX17-202ENST00000427123 CCDC184Q52MB2 194 aa26.49■■□□□ 1.83
SNX17-202ENST00000427123 MRS2Q9HD23 443 aa26.48■■□□□ 1.83
SNX17-202ENST00000427123 FANCAO15360 1455 aa26.48■■□□□ 1.83
SNX17-202ENST00000427123 FKBP8Q14318 412 aa26.48■■□□□ 1.83
SNX17-202ENST00000427123 E9PCH4 1651 aa26.46■■□□□ 1.83
SNX17-202ENST00000427123 ATP7AQ04656 1500 aa26.46■■□□□ 1.83
SNX17-202ENST00000427123 GPRASP1Q5JY77 1395 aa26.45■■□□□ 1.82
SNX17-202ENST00000427123 ST20-MTHFSA0A0A6YYL1 179 aa26.43■■□□□ 1.82
SNX17-202ENST00000427123 POLR3GLQ9BT43 218 aa26.43■■□□□ 1.82
SNX17-202ENST00000427123 PRDM15P57071 1507 aaPredicted RBP26.42■■□□□ 1.82
SNX17-202ENST00000427123 ASXL2Q76L83 1435 aa26.41■■□□□ 1.82
SNX17-202ENST00000427123 TET3O43151 1660 aa26.4■■□□□ 1.82
SNX17-202ENST00000427123 AFAP1Q8N556 730 aa26.4■■□□□ 1.82
SNX17-202ENST00000427123 TRPM2O94759 1503 aa26.4■■□□□ 1.82
SNX17-202ENST00000427123 SPHKAPQ2M3C7 1700 aa26.4■■□□□ 1.82
SNX17-202ENST00000427123 ADGRL1O94910 1474 aa26.39■■□□□ 1.82
SNX17-202ENST00000427123 RGL3Q3MIN7 710 aa26.39■■□□□ 1.81
SNX17-202ENST00000427123 RNF17Q9BXT8 1623 aaKnown RBP26.39■■□□□ 1.81
SNX17-202ENST00000427123 CEP152O94986 1710 aa26.38■■□□□ 1.81
SNX17-202ENST00000427123 FAM9BQ8IZU0 186 aa26.37■■□□□ 1.81
SNX17-202ENST00000427123 VWDEQ8N2E2 1590 aa26.36■■□□□ 1.81
SNX17-202ENST00000427123 ZBED9Q6R2W3 1325 aa26.34■■□□□ 1.81
SNX17-202ENST00000427123 SCAPERQ9BY12 1400 aa26.33■■□□□ 1.81
SNX17-202ENST00000427123 PTPRTO14522 1441 aa26.33■■□□□ 1.8
SNX17-202ENST00000427123 BCANQ96GW7 911 aa26.32■■□□□ 1.8
SNX17-202ENST00000427123 KTN1Q86UP2 1357 aaKnown RBP26.31■■□□□ 1.8
SNX17-202ENST00000427123 MADDQ8WXG6 1647 aa26.31■■□□□ 1.8
SNX17-202ENST00000427123 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
SNX17-202ENST00000427123 KANK1Q14678 1352 aa26.3■■□□□ 1.8
SNX17-202ENST00000427123 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
SNX17-202ENST00000427123 CLTCL1P53675 1640 aa26.3■■□□□ 1.8
SNX17-202ENST00000427123 CFAP74Q9C0B2 1584 aa26.3■■□□□ 1.8
SNX17-202ENST00000427123 MROH1Q8NDA8 1641 aa26.28■■□□□ 1.8
SNX17-202ENST00000427123 KIDINS220Q9ULH0 1771 aa26.26■■□□□ 1.79
SNX17-202ENST00000427123 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
SNX17-202ENST00000427123 NEURL4Q96JN8 1562 aa26.25■■□□□ 1.79
SNX17-202ENST00000427123 ZNF518AQ6AHZ1 1483 aa26.23■■□□□ 1.79
SNX17-202ENST00000427123 IQGAP1P46940 1657 aa26.23■■□□□ 1.79
SNX17-202ENST00000427123 NPM1P06748 294 aaKnown RBP eCLIP26.21■■□□□ 1.79
SNX17-202ENST00000427123 RALBP1Q15311 655 aa26.21■■□□□ 1.79
SNX17-202ENST00000427123 STAC3Q96MF2 364 aa26.21■■□□□ 1.79
SNX17-202ENST00000427123 TESK2Q96S53 571 aa26.19■■□□□ 1.78
SNX17-202ENST00000427123 MYBBP1AQ9BQG0 1328 aaKnown RBP26.19■■□□□ 1.78
SNX17-202ENST00000427123 BRD4O60885 1362 aaPredicted RBP26.19■■□□□ 1.78
SNX17-202ENST00000427123 EFCAB6Q5THR3 1501 aa26.18■■□□□ 1.78
SNX17-202ENST00000427123 KIF3BO15066 747 aa26.18■■□□□ 1.78
SNX17-202ENST00000427123 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
SNX17-202ENST00000427123 MYT1LQ9UL68 1186 aa26.18■■□□□ 1.78
SNX17-202ENST00000427123 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
SNX17-202ENST00000427123 KIAA1210Q9ULL0 1709 aa26.16■■□□□ 1.78
SNX17-202ENST00000427123 LMTK2Q8IWU2 1503 aa26.15■■□□□ 1.78
SNX17-202ENST00000427123 TSHZ2Q9NRE2 1034 aa26.15■■□□□ 1.78
SNX17-202ENST00000427123 TMC1Q8TDI8 760 aa26.14■■□□□ 1.78
SNX17-202ENST00000427123 POGZQ7Z3K3 1410 aa26.14■■□□□ 1.78
SNX17-202ENST00000427123 PNISRQ8TF01 805 aaKnown RBP26.14■■□□□ 1.77
SNX17-202ENST00000427123 CD109Q6YHK3 1445 aa26.13■■□□□ 1.77
SNX17-202ENST00000427123 PARD3Q8TEW0 1356 aa26.13■■□□□ 1.77
SNX17-202ENST00000427123 PPRC1Q5VV67 1664 aaKnown RBP26.13■■□□□ 1.77
SNX17-202ENST00000427123 ERICH6BQ5W0A0 696 aa26.13■■□□□ 1.77
SNX17-202ENST00000427123 TMF1P82094 1093 aa26.12■■□□□ 1.77
SNX17-202ENST00000427123 KIF1BO60333 1816 aa26.12■■□□□ 1.77
SNX17-202ENST00000427123 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
SNX17-202ENST00000427123 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
SNX17-202ENST00000427123 SMG6Q86US8 1419 aaKnown RBP26.1■■□□□ 1.77
SNX17-202ENST00000427123 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
SNX17-202ENST00000427123 SCAF11Q99590 1463 aaKnown RBP26.09■■□□□ 1.77
SNX17-202ENST00000427123 MLH3Q9UHC1 1453 aa26.09■■□□□ 1.77
SNX17-202ENST00000427123 MYOM2P54296 1465 aa26.09■■□□□ 1.77
SNX17-202ENST00000427123 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
SNX17-202ENST00000427123 PER1O15534 1290 aaPredicted RBP26.07■■□□□ 1.76
SNX17-202ENST00000427123 MAP3K4Q9Y6R4 1608 aa26.06■■□□□ 1.76
SNX17-202ENST00000427123 FRMPD1Q5SYB0 1578 aa26.06■■□□□ 1.76
SNX17-202ENST00000427123 UGGT1Q9NYU2 1555 aa26.05■■□□□ 1.76
SNX17-202ENST00000427123 NLRP13Q86W25 1043 aa26.05■■□□□ 1.76
SNX17-202ENST00000427123 MROH2AA6NES4 1674 aa26.03■■□□□ 1.76
SNX17-202ENST00000427123 ABCA6Q8N139 1617 aa26.02■■□□□ 1.76
SNX17-202ENST00000427123 NEO1Q92859 1461 aa26.02■■□□□ 1.76
SNX17-202ENST00000427123 IRX6P78412 446 aaPredicted RBP26.02■■□□□ 1.76
SNX17-202ENST00000427123 SYNMO15061 1565 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1121.4 ms