RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CRIM1-203ENST00000426856 LRRC9Q6ZRR7 1453 aa24.27■■□□□ 1.48
CRIM1-203ENST00000426856 FAM135AQ9P2D6 1515 aa24.26■■□□□ 1.47
CRIM1-203ENST00000426856 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
CRIM1-203ENST00000426856 FBXO31Q5XUX0 539 aaPredicted RBP24.26■■□□□ 1.47
CRIM1-203ENST00000426856 PZPP20742 1482 aa24.26■■□□□ 1.47
CRIM1-203ENST00000426856 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
CRIM1-203ENST00000426856 TNRQ92752 1358 aa24.24■■□□□ 1.47
CRIM1-203ENST00000426856 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
CRIM1-203ENST00000426856 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
CRIM1-203ENST00000426856 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
CRIM1-203ENST00000426856 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.46
CRIM1-203ENST00000426856 MAST1Q9Y2H9 1570 aa24.19■■□□□ 1.46
CRIM1-203ENST00000426856 RNF17Q9BXT8 1623 aaKnown RBP24.18■■□□□ 1.46
CRIM1-203ENST00000426856 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
CRIM1-203ENST00000426856 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
CRIM1-203ENST00000426856 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
CRIM1-203ENST00000426856 SPATA31D1Q6ZQQ2 1576 aa24.16■■□□□ 1.46
CRIM1-203ENST00000426856 MAP3K1Q13233 1512 aa24.15■■□□□ 1.46
CRIM1-203ENST00000426856 ILDR2Q71H61 639 aa24.15■■□□□ 1.46
CRIM1-203ENST00000426856 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
CRIM1-203ENST00000426856 MIA2Q96PC5 1412 aa24.14■■□□□ 1.45
CRIM1-203ENST00000426856 ABCC3O15438 1527 aa24.13■■□□□ 1.45
CRIM1-203ENST00000426856 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
CRIM1-203ENST00000426856 MYOM3Q5VTT5 1437 aa24.12■■□□□ 1.45
CRIM1-203ENST00000426856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.45
CRIM1-203ENST00000426856 MROH1Q8NDA8 1641 aa24.11■■□□□ 1.45
CRIM1-203ENST00000426856 EIF2AK4Q9P2K8 1649 aaKnown RBP24.11■■□□□ 1.45
CRIM1-203ENST00000426856 ZC3H13Q5T200 1668 aaKnown RBP24.11■■□□□ 1.45
CRIM1-203ENST00000426856 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
CRIM1-203ENST00000426856 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
CRIM1-203ENST00000426856 THEMISQ8N1K5 641 aaPredicted RBP24.06■■□□□ 1.44
CRIM1-203ENST00000426856 CEP152O94986 1710 aa24.06■■□□□ 1.44
CRIM1-203ENST00000426856 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
CRIM1-203ENST00000426856 CPS1P31327 1500 aa24.05■■□□□ 1.44
CRIM1-203ENST00000426856 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
CRIM1-203ENST00000426856 ANKLE2Q86XL3 938 aa24.05■■□□□ 1.44
CRIM1-203ENST00000426856 ERVK-7P63135 1459 aa24.05■■□□□ 1.44
CRIM1-203ENST00000426856 MED14O60244 1454 aa24.03■■□□□ 1.44
CRIM1-203ENST00000426856 DUOX2Q9NRD8 1548 aa24.03■■□□□ 1.44
CRIM1-203ENST00000426856 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
CRIM1-203ENST00000426856 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
CRIM1-203ENST00000426856 IQGAP1P46940 1657 aa24■■□□□ 1.43
CRIM1-203ENST00000426856 CFAP65Q6ZU64 1925 aaKnown RBP24■■□□□ 1.43
CRIM1-203ENST00000426856 PTPN23Q9H3S7 1636 aa23.99■■□□□ 1.43
CRIM1-203ENST00000426856 KIF15Q9NS87 1388 aa23.98■■□□□ 1.43
CRIM1-203ENST00000426856 ABCC5O15440 1437 aa23.98■■□□□ 1.43
CRIM1-203ENST00000426856 SOCS7O14512 581 aa23.97■■□□□ 1.43
CRIM1-203ENST00000426856 PRDM15P57071 1507 aaPredicted RBP23.97■■□□□ 1.43
CRIM1-203ENST00000426856 UBR1Q8IWV7 1749 aa23.96■■□□□ 1.43
CRIM1-203ENST00000426856 STRCP1A6NGW2 1772 aa23.95■■□□□ 1.42
CRIM1-203ENST00000426856 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
CRIM1-203ENST00000426856 PIP4K2BP78356 416 aa23.94■■□□□ 1.42
CRIM1-203ENST00000426856 ERBINQ96RT1 1412 aa23.93■■□□□ 1.42
CRIM1-203ENST00000426856 DAPK1P53355 1430 aa23.93■■□□□ 1.42
CRIM1-203ENST00000426856 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
CRIM1-203ENST00000426856 RRP7BPQ9NSQ0 103 aa23.92■■□□□ 1.42
CRIM1-203ENST00000426856 TOM1O60784 492 aa23.91■■□□□ 1.42
CRIM1-203ENST00000426856 HSPA1LP34931 641 aa23.91■■□□□ 1.42
CRIM1-203ENST00000426856 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
CRIM1-203ENST00000426856 ARHGAP31Q2M1Z3 1444 aa23.9■■□□□ 1.42
CRIM1-203ENST00000426856 APLP2Q06481 763 aa23.88■■□□□ 1.41
CRIM1-203ENST00000426856 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
CRIM1-203ENST00000426856 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
CRIM1-203ENST00000426856 SLIT1O75093 1534 aa23.86■■□□□ 1.41
CRIM1-203ENST00000426856 LRRC7Q96NW7 1537 aa23.86■■□□□ 1.41
CRIM1-203ENST00000426856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.41
CRIM1-203ENST00000426856 SYNMO15061 1565 aa23.86■■□□□ 1.41
CRIM1-203ENST00000426856 PIK3C2BO00750 1634 aa23.84■■□□□ 1.41
CRIM1-203ENST00000426856 MED1Q15648 1581 aaPredicted RBP23.83■■□□□ 1.41
CRIM1-203ENST00000426856 LTKP29376 864 aa23.83■■□□□ 1.41
CRIM1-203ENST00000426856 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
CRIM1-203ENST00000426856 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
CRIM1-203ENST00000426856 TXNDC2Q86VQ3 553 aa23.8■■□□□ 1.4
CRIM1-203ENST00000426856 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
CRIM1-203ENST00000426856 KANK1Q14678 1352 aa23.79■■□□□ 1.4
CRIM1-203ENST00000426856 TMEM2Q9UHN6 1383 aa23.76■■□□□ 1.39
CRIM1-203ENST00000426856 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
CRIM1-203ENST00000426856 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
CRIM1-203ENST00000426856 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
CRIM1-203ENST00000426856 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
CRIM1-203ENST00000426856 EID1Q9Y6B2 187 aa23.73■■□□□ 1.39
CRIM1-203ENST00000426856 IDI1Q13907 227 aa23.72■■□□□ 1.39
CRIM1-203ENST00000426856 NOS1P29475 1434 aa23.71■■□□□ 1.39
CRIM1-203ENST00000426856 SENP3Q9H4L4 574 aaPredicted RBP23.71■■□□□ 1.39
CRIM1-203ENST00000426856 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
CRIM1-203ENST00000426856 ADGRB3O60242 1522 aa23.68■■□□□ 1.38
CRIM1-203ENST00000426856 FAM50AQ14320 339 aaKnown RBP23.67■■□□□ 1.38
CRIM1-203ENST00000426856 TET3O43151 1660 aa23.65■■□□□ 1.38
CRIM1-203ENST00000426856 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
CRIM1-203ENST00000426856 SLC26A8Q96RN1 970 aa23.62■■□□□ 1.37
CRIM1-203ENST00000426856 RPRD2Q5VT52 1461 aaKnown RBP23.62■■□□□ 1.37
CRIM1-203ENST00000426856 TMEM94Q12767 1356 aa23.6■■□□□ 1.37
CRIM1-203ENST00000426856 MYO5BQ9ULV0 1848 aa23.59■■□□□ 1.37
CRIM1-203ENST00000426856 PHF23Q9BUL5 403 aaPredicted RBP23.59■■□□□ 1.37
CRIM1-203ENST00000426856 SLC52A1Q9NWF4 448 aa23.59■■□□□ 1.37
CRIM1-203ENST00000426856 KCNA6P17658 529 aa23.58■■□□□ 1.37
CRIM1-203ENST00000426856 UNC13BO14795 1591 aa23.57■■□□□ 1.36
CRIM1-203ENST00000426856 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
CRIM1-203ENST00000426856 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms