RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ILDR2Q71H61 639 aa28.12■■■□□ 2.09
HDAC7-208ENST00000425451 DNMT1P26358 1616 aaKnown RBP28.11■■■□□ 2.09
HDAC7-208ENST00000425451 KDM5DQ9BY66 1539 aa28.07■■■□□ 2.08
HDAC7-208ENST00000425451 TNRQ92752 1358 aa28.06■■■□□ 2.08
HDAC7-208ENST00000425451 PZPP20742 1482 aa28.06■■■□□ 2.08
HDAC7-208ENST00000425451 FAM135AQ9P2D6 1515 aa28.06■■■□□ 2.08
HDAC7-208ENST00000425451 ARHGEF5Q12774 1597 aa28.06■■■□□ 2.08
HDAC7-208ENST00000425451 WASHC2CQ9Y4E1 1318 aa28.05■■■□□ 2.08
HDAC7-208ENST00000425451 UBAP1LF5GYI3 381 aa28.02■■■□□ 2.08
HDAC7-208ENST00000425451 LRRC9Q6ZRR7 1453 aa28.02■■■□□ 2.08
HDAC7-208ENST00000425451 TSPY4P0CV99 314 aa28.01■■■□□ 2.07
HDAC7-208ENST00000425451 TSPY10P0CW01 314 aa28.01■■■□□ 2.07
HDAC7-208ENST00000425451 VPS8Q8N3P4 1428 aa28.01■■■□□ 2.07
HDAC7-208ENST00000425451 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
HDAC7-208ENST00000425451 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
HDAC7-208ENST00000425451 LOC105371045A0A1W2PR82 267 aa27.99■■■□□ 2.07
HDAC7-208ENST00000425451 MIA2Q96PC5 1412 aa27.98■■■□□ 2.07
HDAC7-208ENST00000425451 POLR1AO95602 1720 aaPredicted RBP27.96■■■□□ 2.07
HDAC7-208ENST00000425451 KANK4Q5T7N3 995 aaPredicted RBP27.95■■■□□ 2.06
HDAC7-208ENST00000425451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.95■■■□□ 2.06
HDAC7-208ENST00000425451 SOCS7O14512 581 aa27.93■■■□□ 2.06
HDAC7-208ENST00000425451 NLRP1Q9C000 1473 aa27.93■■■□□ 2.06
HDAC7-208ENST00000425451 MAST1Q9Y2H9 1570 aa27.93■■■□□ 2.06
HDAC7-208ENST00000425451 THEMISQ8N1K5 641 aaPredicted RBP27.92■■■□□ 2.06
HDAC7-208ENST00000425451 RNF17Q9BXT8 1623 aaKnown RBP27.92■■■□□ 2.06
HDAC7-208ENST00000425451 ANKLE2Q86XL3 938 aa27.91■■■□□ 2.06
HDAC7-208ENST00000425451 MAP3K1Q13233 1512 aa27.9■■■□□ 2.06
HDAC7-208ENST00000425451 UGGT1Q9NYU2 1555 aa27.9■■■□□ 2.06
HDAC7-208ENST00000425451 SHANK2Q9UPX8 1470 aa27.89■■■□□ 2.06
HDAC7-208ENST00000425451 ABCC3O15438 1527 aa27.88■■■□□ 2.05
HDAC7-208ENST00000425451 CPS1P31327 1500 aa27.87■■■□□ 2.05
HDAC7-208ENST00000425451 MYOM3Q5VTT5 1437 aa27.86■■■□□ 2.05
HDAC7-208ENST00000425451 MED14O60244 1454 aa27.86■■■□□ 2.05
HDAC7-208ENST00000425451 VWDEQ8N2E2 1590 aa27.85■■■□□ 2.05
HDAC7-208ENST00000425451 MROH1Q8NDA8 1641 aa27.85■■■□□ 2.05
HDAC7-208ENST00000425451 EIF2AK4Q9P2K8 1649 aaKnown RBP27.85■■■□□ 2.05
HDAC7-208ENST00000425451 DEPDC5O75140 1603 aa27.84■■■□□ 2.05
HDAC7-208ENST00000425451 ZC3H13Q5T200 1668 aaKnown RBP27.84■■■□□ 2.05
HDAC7-208ENST00000425451 NPHP4O75161 1426 aaPredicted RBP27.83■■■□□ 2.05
HDAC7-208ENST00000425451 ERVK-7P63135 1459 aa27.8■■■□□ 2.04
HDAC7-208ENST00000425451 TOM1O60784 492 aa27.78■■■□□ 2.04
HDAC7-208ENST00000425451 HSPA1LP34931 641 aa27.77■■■□□ 2.04
HDAC7-208ENST00000425451 DUOX2Q9NRD8 1548 aa27.77■■■□□ 2.04
HDAC7-208ENST00000425451 PIP4K2BP78356 416 aa27.76■■■□□ 2.03
HDAC7-208ENST00000425451 CEP152O94986 1710 aa27.75■■■□□ 2.03
HDAC7-208ENST00000425451 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
HDAC7-208ENST00000425451 SCAF1Q9H7N4 1312 aaKnown RBP27.74■■■□□ 2.03
HDAC7-208ENST00000425451 ALKQ9UM73 1620 aa27.72■■■□□ 2.03
HDAC7-208ENST00000425451 ABCC5O15440 1437 aa27.72■■■□□ 2.03
HDAC7-208ENST00000425451 STRCP1A6NGW2 1772 aa27.7■■■□□ 2.02
HDAC7-208ENST00000425451 KIF15Q9NS87 1388 aa27.7■■■□□ 2.02
HDAC7-208ENST00000425451 UBR1Q8IWV7 1749 aa27.69■■■□□ 2.02
HDAC7-208ENST00000425451 CFAP65Q6ZU64 1925 aaKnown RBP27.69■■■□□ 2.02
HDAC7-208ENST00000425451 RRP7BPQ9NSQ0 103 aa27.68■■■□□ 2.02
HDAC7-208ENST00000425451 ARHGAP31Q2M1Z3 1444 aa27.67■■■□□ 2.02
HDAC7-208ENST00000425451 PRDM15P57071 1507 aaPredicted RBP27.67■■■□□ 2.02
HDAC7-208ENST00000425451 CROCC2H7BZ55 1655 aa27.67■■■□□ 2.02
HDAC7-208ENST00000425451 ERBINQ96RT1 1412 aa27.67■■■□□ 2.02
HDAC7-208ENST00000425451 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
HDAC7-208ENST00000425451 LRRC7Q96NW7 1537 aa27.66■■■□□ 2.02
HDAC7-208ENST00000425451 LTKP29376 864 aa27.64■■■□□ 2.02
HDAC7-208ENST00000425451 ARHGAP23Q9P227 1491 aa27.64■■■□□ 2.01
HDAC7-208ENST00000425451 DAPK1P53355 1430 aa27.63■■■□□ 2.01
HDAC7-208ENST00000425451 SCAF11Q99590 1463 aaKnown RBP27.63■■■□□ 2.01
HDAC7-208ENST00000425451 SLIT1O75093 1534 aa27.62■■■□□ 2.01
HDAC7-208ENST00000425451 MED1Q15648 1581 aaPredicted RBP27.61■■■□□ 2.01
HDAC7-208ENST00000425451 TXNDC2Q86VQ3 553 aa27.59■■■□□ 2.01
HDAC7-208ENST00000425451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.59■■■□□ 2.01
HDAC7-208ENST00000425451 FGD6Q6ZV73 1430 aa27.58■■■□□ 2.01
HDAC7-208ENST00000425451 SYNMO15061 1565 aa27.58■■■□□ 2.01
HDAC7-208ENST00000425451 APLP2Q06481 763 aa27.58■■■□□ 2.01
HDAC7-208ENST00000425451 PIK3C2BO00750 1634 aa27.54■■■□□ 2
HDAC7-208ENST00000425451 CHIC2Q9UKJ5 165 aa27.53■■■□□ 2
HDAC7-208ENST00000425451 KANK1Q14678 1352 aa27.52■■■□□ 2
HDAC7-208ENST00000425451 LMTK2Q8IWU2 1503 aa27.51■■■□□ 2
HDAC7-208ENST00000425451 ANKRD30AQ9BXX3 1397 aa27.51■■□□□ 1.99
HDAC7-208ENST00000425451 TMEM2Q9UHN6 1383 aa27.51■■□□□ 1.99
HDAC7-208ENST00000425451 EID1Q9Y6B2 187 aa27.51■■□□□ 1.99
HDAC7-208ENST00000425451 IDI1Q13907 227 aa27.49■■□□□ 1.99
HDAC7-208ENST00000425451 XIRP1Q702N8 1843 aaKnown RBP27.46■■□□□ 1.99
HDAC7-208ENST00000425451 SENP3Q9H4L4 574 aaPredicted RBP27.46■■□□□ 1.99
HDAC7-208ENST00000425451 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
HDAC7-208ENST00000425451 KDM5AP29375 1690 aaKnown RBP27.45■■□□□ 1.98
HDAC7-208ENST00000425451 EFCAB6Q5THR3 1501 aa27.45■■□□□ 1.98
HDAC7-208ENST00000425451 NOS1P29475 1434 aa27.43■■□□□ 1.98
HDAC7-208ENST00000425451 ADGRL2O95490 1459 aa27.42■■□□□ 1.98
HDAC7-208ENST00000425451 TET3O43151 1660 aa27.4■■□□□ 1.98
HDAC7-208ENST00000425451 PHF23Q9BUL5 403 aaPredicted RBP27.37■■□□□ 1.97
HDAC7-208ENST00000425451 KCNA6P17658 529 aa27.36■■□□□ 1.97
HDAC7-208ENST00000425451 SLC26A8Q96RN1 970 aa27.36■■□□□ 1.97
HDAC7-208ENST00000425451 TMEM94Q12767 1356 aa27.35■■□□□ 1.97
HDAC7-208ENST00000425451 FAM50AQ14320 339 aaKnown RBP27.34■■□□□ 1.97
HDAC7-208ENST00000425451 SLC52A1Q9NWF4 448 aa27.34■■□□□ 1.97
HDAC7-208ENST00000425451 ADGRB3O60242 1522 aa27.34■■□□□ 1.97
HDAC7-208ENST00000425451 ANKRD50Q9ULJ7 1429 aa27.33■■□□□ 1.96
HDAC7-208ENST00000425451 FAM135BQ49AJ0 1406 aa27.32■■□□□ 1.96
HDAC7-208ENST00000425451 RPRD2Q5VT52 1461 aaKnown RBP27.3■■□□□ 1.96
HDAC7-208ENST00000425451 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
HDAC7-208ENST00000425451 RBM33Q96EV2 1170 aaKnown RBP27.29■■□□□ 1.96
HDAC7-208ENST00000425451 RGS17Q9UGC6 210 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms