RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 NISCHQ9Y2I1 1504 aa44.43■■■■■ 4.7
HDAC7-208ENST00000425451 ABCC9O60706 1549 aa40.08■■■■■ 4.01
HDAC7-208ENST00000425451 CCDC180Q9P1Z9 1646 aa39.88■■■■□ 3.97
HDAC7-208ENST00000425451 RB1CC1Q8TDY2 1594 aa38.05■■■■□ 3.68
HDAC7-208ENST00000425451 DNAJC5BQ9UF47 199 aa37.82■■■■□ 3.64
HDAC7-208ENST00000425451 NACADO15069 1562 aa37.76■■■■□ 3.64
HDAC7-208ENST00000425451 DCAF8L2P0C7V8 631 aa37.54■■■■□ 3.6
HDAC7-208ENST00000425451 PABPN1Q86U42 306 aaKnown RBP eCLIP37.31■■■■□ 3.56
HDAC7-208ENST00000425451 MYO15BQ96JP2 1530 aa37.22■■■■□ 3.55
HDAC7-208ENST00000425451 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
HDAC7-208ENST00000425451 BICRAQ9NZM4 1560 aa37.01■■■■□ 3.52
HDAC7-208ENST00000425451 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
HDAC7-208ENST00000425451 DCAF1Q9Y4B6 1507 aa36.69■■■■□ 3.46
HDAC7-208ENST00000425451 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
HDAC7-208ENST00000425451 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
HDAC7-208ENST00000425451 CC2D2AQ9P2K1 1620 aa36.19■■■■□ 3.38
HDAC7-208ENST00000425451 CECR2Q9BXF3 1484 aa36.11■■■■□ 3.37
HDAC7-208ENST00000425451 EIF4G1Q04637 1599 aaKnown RBP36.07■■■■□ 3.37
HDAC7-208ENST00000425451 NCAPD3P42695 1498 aa34.91■■■■□ 3.18
HDAC7-208ENST00000425451 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
HDAC7-208ENST00000425451 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
HDAC7-208ENST00000425451 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
HDAC7-208ENST00000425451 SMARCA2P51531 1590 aa34.62■■■■□ 3.13
HDAC7-208ENST00000425451 HMGXB3Q12766 1538 aa34.59■■■■□ 3.13
HDAC7-208ENST00000425451 CUX2O14529 1486 aa34.58■■■■□ 3.13
HDAC7-208ENST00000425451 ERCC6Q03468 1493 aa34.56■■■■□ 3.12
HDAC7-208ENST00000425451 BAZ1AQ9NRL2 1556 aaPredicted RBP34.46■■■■□ 3.11
HDAC7-208ENST00000425451 NESP48681 1621 aa34.41■■■■□ 3.1
HDAC7-208ENST00000425451 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
HDAC7-208ENST00000425451 PEG3Q9GZU2 1588 aa34.36■■■■□ 3.09
HDAC7-208ENST00000425451 MROH2BQ7Z745 1585 aa34.25■■■■□ 3.07
HDAC7-208ENST00000425451 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
HDAC7-208ENST00000425451 THOC2Q8NI27 1593 aaKnown RBP34.06■■■■□ 3.04
HDAC7-208ENST00000425451 KIF21AQ7Z4S6 1674 aa33.91■■■■□ 3.02
HDAC7-208ENST00000425451 PDS5BQ9NTI5 1447 aa33.9■■■■□ 3.02
HDAC7-208ENST00000425451 CADPSQ9ULU8 1353 aa33.83■■■■□ 3.01
HDAC7-208ENST00000425451 WIZO95785 1651 aa33.8■■■■□ 3
HDAC7-208ENST00000425451 MRC2Q9UBG0 1479 aa33.63■■■□□ 2.97
HDAC7-208ENST00000425451 WDR62O43379 1518 aa33.56■■■□□ 2.96
HDAC7-208ENST00000425451 RSF1Q96T23 1441 aaPredicted RBP33.49■■■□□ 2.95
HDAC7-208ENST00000425451 CEP164Q9UPV0 1460 aa33.45■■■□□ 2.95
HDAC7-208ENST00000425451 FANCD2Q9BXW9 1451 aa33.43■■■□□ 2.94
HDAC7-208ENST00000425451 CFTRP13569 1480 aa33.42■■■□□ 2.94
HDAC7-208ENST00000425451 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
HDAC7-208ENST00000425451 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
HDAC7-208ENST00000425451 TRIM41Q8WV44 630 aa33.15■■■□□ 2.9
HDAC7-208ENST00000425451 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
HDAC7-208ENST00000425451 OSCARQ8IYS5 282 aa33■■■□□ 2.87
HDAC7-208ENST00000425451 PRDM2Q13029 1718 aa32.98■■■□□ 2.87
HDAC7-208ENST00000425451 ZNF608Q9ULD9 1512 aaPredicted RBP32.81■■■□□ 2.84
HDAC7-208ENST00000425451 IFT140Q96RY7 1462 aa32.8■■■□□ 2.84
HDAC7-208ENST00000425451 TOPBP1Q92547 1522 aa32.78■■■□□ 2.84
HDAC7-208ENST00000425451 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
HDAC7-208ENST00000425451 DNMBPQ6XZF7 1577 aa32.62■■■□□ 2.81
HDAC7-208ENST00000425451 RIMBP3CA6NJZ7 1639 aa32.58■■■□□ 2.81
HDAC7-208ENST00000425451 RIMBP3BA6NNM3 1639 aa32.58■■■□□ 2.81
HDAC7-208ENST00000425451 RIMBP3Q9UFD9 1639 aa32.58■■■□□ 2.81
HDAC7-208ENST00000425451 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
HDAC7-208ENST00000425451 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.8
HDAC7-208ENST00000425451 AQRO60306 1485 aaKnown RBP eCLIP32.48■■■□□ 2.794e-7■■■■□ 26.5
HDAC7-208ENST00000425451 ARHGEF11O15085 1522 aa32.46■■■□□ 2.79
HDAC7-208ENST00000425451 POLA1P09884 1462 aaPredicted RBP32.44■■■□□ 2.78
HDAC7-208ENST00000425451 CHD1O14646 1710 aa32.34■■■□□ 2.77
HDAC7-208ENST00000425451 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
HDAC7-208ENST00000425451 SOGA1O94964 1423 aa32.29■■■□□ 2.76
HDAC7-208ENST00000425451 TDRD9Q8NDG6 1382 aaKnown RBP32.27■■■□□ 2.76
HDAC7-208ENST00000425451 FBLN2P98095 1184 aa32.26■■■□□ 2.75
HDAC7-208ENST00000425451 CYB5RLQ6IPT4 315 aa32.25■■■□□ 2.75
HDAC7-208ENST00000425451 FGD5Q6ZNL6 1462 aa32.21■■■□□ 2.75
HDAC7-208ENST00000425451 CUX1P39880 1505 aa32.17■■■□□ 2.74
HDAC7-208ENST00000425451 ARAP1Q96P48 1450 aa32.15■■■□□ 2.74
HDAC7-208ENST00000425451 WDR97A6NE52 1622 aa32.11■■■□□ 2.73
HDAC7-208ENST00000425451 SNAPC4Q5SXM2 1469 aa32.11■■■□□ 2.73
HDAC7-208ENST00000425451 MAGI1Q96QZ7 1491 aaPredicted RBP32.02■■■□□ 2.72
HDAC7-208ENST00000425451 CLASP1Q7Z460 1538 aa32.01■■■□□ 2.72
HDAC7-208ENST00000425451 GRIN2BQ13224 1484 aa32.01■■■□□ 2.71
HDAC7-208ENST00000425451 CHMP7Q8WUX9 453 aaPredicted RBP32■■■□□ 2.71
HDAC7-208ENST00000425451 SYNJ2O15056 1496 aa31.93■■■□□ 2.7
HDAC7-208ENST00000425451 SYNJ1O43426 1573 aa31.93■■■□□ 2.7
HDAC7-208ENST00000425451 TRHP20396 242 aaPredicted RBP31.89■■■□□ 2.7
HDAC7-208ENST00000425451 GAPVD1Q14C86 1478 aa31.88■■■□□ 2.69
HDAC7-208ENST00000425451 SUPT5HO00267 1087 aaKnown RBP31.86■■■□□ 2.69
HDAC7-208ENST00000425451 PBRM1Q86U86 1689 aa31.84■■■□□ 2.69
HDAC7-208ENST00000425451 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
HDAC7-208ENST00000425451 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
HDAC7-208ENST00000425451 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.665e-6■■■■■ 29.2
HDAC7-208ENST00000425451 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
HDAC7-208ENST00000425451 TOP2BQ02880 1626 aa31.59■■■□□ 2.65
HDAC7-208ENST00000425451 BIVM-ERCC5R4GMW8 1640 aa31.59■■■□□ 2.65
HDAC7-208ENST00000425451 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
HDAC7-208ENST00000425451 ERCC6L2Q5T890 1561 aa31.53■■■□□ 2.64
HDAC7-208ENST00000425451 NUP160Q12769 1436 aa31.53■■■□□ 2.64
HDAC7-208ENST00000425451 CEP170Q5SW79 1584 aa31.51■■■□□ 2.63
HDAC7-208ENST00000425451 FHAD1B1AJZ9 1412 aa31.48■■■□□ 2.63
HDAC7-208ENST00000425451 ERICH3Q5RHP9 1530 aa31.42■■■□□ 2.62
HDAC7-208ENST00000425451 SHROOM2Q13796 1616 aa31.39■■■□□ 2.62
HDAC7-208ENST00000425451 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
HDAC7-208ENST00000425451 JPH4Q96JJ6 628 aa31.21■■■□□ 2.59
HDAC7-208ENST00000425451 RUSC2Q8N2Y8 1516 aa31.12■■■□□ 2.57
HDAC7-208ENST00000425451 AEBP2Q6ZN18 517 aaPredicted RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms