RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 MIA2Q96PC5 1412 aa28.09■■■□□ 2.09
GPC1-203ENST00000425056 KIF3BO15066 747 aa28.08■■■□□ 2.09
GPC1-203ENST00000425056 LTBP4Q8N2S1 1624 aa28.06■■■□□ 2.08
GPC1-203ENST00000425056 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
GPC1-203ENST00000425056 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
GPC1-203ENST00000425056 PZPP20742 1482 aa28.05■■■□□ 2.08
GPC1-203ENST00000425056 RNF17Q9BXT8 1623 aaKnown RBP28.04■■■□□ 2.08
GPC1-203ENST00000425056 A2ML1A8K2U0 1454 aa28.03■■■□□ 2.08
GPC1-203ENST00000425056 TCOF1Q13428 1488 aaKnown RBP28.03■■■□□ 2.08
GPC1-203ENST00000425056 DNMT1P26358 1616 aaKnown RBP28.01■■■□□ 2.07
GPC1-203ENST00000425056 EIF2AK4Q9P2K8 1649 aaKnown RBP28.01■■■□□ 2.07
GPC1-203ENST00000425056 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
GPC1-203ENST00000425056 IQSEC2Q5JU85 1478 aa27.97■■■□□ 2.07
GPC1-203ENST00000425056 PKD2Q13563 968 aa27.97■■■□□ 2.07
GPC1-203ENST00000425056 TNRQ92752 1358 aa27.97■■■□□ 2.07
GPC1-203ENST00000425056 NCKAP5LQ9HCH0 1330 aa27.96■■■□□ 2.07
GPC1-203ENST00000425056 WASHC2CQ9Y4E1 1318 aa27.96■■■□□ 2.07
GPC1-203ENST00000425056 CROCC2H7BZ55 1655 aa27.96■■■□□ 2.07
GPC1-203ENST00000425056 MROH1Q8NDA8 1641 aa27.93■■■□□ 2.06
GPC1-203ENST00000425056 FBXO31Q5XUX0 539 aaPredicted RBP27.93■■■□□ 2.06
GPC1-203ENST00000425056 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
GPC1-203ENST00000425056 ABCC3O15438 1527 aa27.92■■■□□ 2.06
GPC1-203ENST00000425056 PTPN23Q9H3S7 1636 aa27.92■■■□□ 2.06
GPC1-203ENST00000425056 POLR1AO95602 1720 aaPredicted RBP27.92■■■□□ 2.06
GPC1-203ENST00000425056 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
GPC1-203ENST00000425056 NLRP1Q9C000 1473 aa27.89■■■□□ 2.06
GPC1-203ENST00000425056 APLP2Q06481 763 aa27.88■■■□□ 2.05
GPC1-203ENST00000425056 NEURL4Q96JN8 1562 aa27.86■■■□□ 2.05
GPC1-203ENST00000425056 ZNF335Q9H4Z2 1342 aaPredicted RBP27.86■■■□□ 2.05
GPC1-203ENST00000425056 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
GPC1-203ENST00000425056 ABCC5O15440 1437 aa27.85■■■□□ 2.05
GPC1-203ENST00000425056 CEP152O94986 1710 aa27.85■■■□□ 2.05
GPC1-203ENST00000425056 FGD6Q6ZV73 1430 aa27.84■■■□□ 2.05
GPC1-203ENST00000425056 PRDM15P57071 1507 aaPredicted RBP27.83■■■□□ 2.05
GPC1-203ENST00000425056 KIF15Q9NS87 1388 aa27.83■■■□□ 2.05
GPC1-203ENST00000425056 UGGT1Q9NYU2 1555 aa27.82■■■□□ 2.04
GPC1-203ENST00000425056 DAPK1P53355 1430 aa27.82■■■□□ 2.04
GPC1-203ENST00000425056 ERBINQ96RT1 1412 aa27.82■■■□□ 2.04
GPC1-203ENST00000425056 ERVK-7P63135 1459 aa27.81■■■□□ 2.04
GPC1-203ENST00000425056 DEPDC5O75140 1603 aa27.78■■■□□ 2.04
GPC1-203ENST00000425056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.77■■■□□ 2.04
GPC1-203ENST00000425056 THEMISQ8N1K5 641 aaPredicted RBP27.75■■■□□ 2.03
GPC1-203ENST00000425056 MED14O60244 1454 aa27.73■■■□□ 2.03
GPC1-203ENST00000425056 ARHGAP31Q2M1Z3 1444 aa27.72■■■□□ 2.03
GPC1-203ENST00000425056 ANKLE2Q86XL3 938 aa27.71■■■□□ 2.03
GPC1-203ENST00000425056 RRP7BPQ9NSQ0 103 aa27.71■■■□□ 2.03
GPC1-203ENST00000425056 CFAP65Q6ZU64 1925 aaKnown RBP27.7■■■□□ 2.02
GPC1-203ENST00000425056 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
GPC1-203ENST00000425056 CPS1P31327 1500 aa27.69■■■□□ 2.02
GPC1-203ENST00000425056 IQGAP1P46940 1657 aa27.68■■■□□ 2.02
GPC1-203ENST00000425056 NPHP4O75161 1426 aaPredicted RBP27.68■■■□□ 2.02
GPC1-203ENST00000425056 ANKRD30AQ9BXX3 1397 aa27.68■■■□□ 2.02
GPC1-203ENST00000425056 VWDEQ8N2E2 1590 aa27.68■■■□□ 2.02
GPC1-203ENST00000425056 ADGRL2O95490 1459 aa27.65■■■□□ 2.02
GPC1-203ENST00000425056 LMTK2Q8IWU2 1503 aa27.63■■■□□ 2.01
GPC1-203ENST00000425056 KANK1Q14678 1352 aa27.61■■■□□ 2.01
GPC1-203ENST00000425056 UBAP1LF5GYI3 381 aa27.61■■■□□ 2.01
GPC1-203ENST00000425056 CHIC2Q9UKJ5 165 aa27.6■■■□□ 2.01
GPC1-203ENST00000425056 ARHGAP23Q9P227 1491 aa27.58■■■□□ 2.01
GPC1-203ENST00000425056 SLIT1O75093 1534 aa27.58■■■□□ 2.01
GPC1-203ENST00000425056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
GPC1-203ENST00000425056 SCAF11Q99590 1463 aaKnown RBP27.57■■■□□ 2
GPC1-203ENST00000425056 PIK3C2BO00750 1634 aa27.56■■■□□ 2
GPC1-203ENST00000425056 EFCAB6Q5THR3 1501 aa27.56■■■□□ 2
GPC1-203ENST00000425056 KDM5AP29375 1690 aaKnown RBP27.55■■■□□ 2
GPC1-203ENST00000425056 STRCP1A6NGW2 1772 aa27.54■■■□□ 2
GPC1-203ENST00000425056 DISP3Q9P2K9 1392 aa27.53■■■□□ 2
GPC1-203ENST00000425056 SYNMO15061 1565 aa27.52■■■□□ 2
GPC1-203ENST00000425056 FAM50AQ14320 339 aaKnown RBP27.52■■■□□ 2
GPC1-203ENST00000425056 ANKRD50Q9ULJ7 1429 aa27.49■■□□□ 1.99
GPC1-203ENST00000425056 NOS1P29475 1434 aa27.48■■□□□ 1.99
GPC1-203ENST00000425056 ALKQ9UM73 1620 aa27.45■■□□□ 1.99
GPC1-203ENST00000425056 LTKP29376 864 aa27.45■■□□□ 1.98
GPC1-203ENST00000425056 LRRC7Q96NW7 1537 aa27.45■■□□□ 1.98
GPC1-203ENST00000425056 TMEM2Q9UHN6 1383 aa27.45■■□□□ 1.98
GPC1-203ENST00000425056 TOM1O60784 492 aa27.44■■□□□ 1.98
GPC1-203ENST00000425056 RPRD2Q5VT52 1461 aaKnown RBP27.44■■□□□ 1.98
GPC1-203ENST00000425056 TXNDC2Q86VQ3 553 aa27.43■■□□□ 1.98
GPC1-203ENST00000425056 TET3O43151 1660 aa27.43■■□□□ 1.98
GPC1-203ENST00000425056 ADGRB3O60242 1522 aa27.42■■□□□ 1.98
GPC1-203ENST00000425056 UNC13BO14795 1591 aa27.42■■□□□ 1.98
GPC1-203ENST00000425056 IDI1Q13907 227 aa27.4■■□□□ 1.98
GPC1-203ENST00000425056 EID1Q9Y6B2 187 aa27.4■■□□□ 1.98
GPC1-203ENST00000425056 GCC2Q8IWJ2 1684 aa27.39■■□□□ 1.97
GPC1-203ENST00000425056 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
GPC1-203ENST00000425056 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
GPC1-203ENST00000425056 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
GPC1-203ENST00000425056 PIP4K2BP78356 416 aa27.37■■□□□ 1.97
GPC1-203ENST00000425056 ILDR2Q71H61 639 aa27.36■■□□□ 1.97
GPC1-203ENST00000425056 SLC52A1Q9NWF4 448 aa27.34■■□□□ 1.97
GPC1-203ENST00000425056 XIRP1Q702N8 1843 aaKnown RBP27.33■■□□□ 1.97
GPC1-203ENST00000425056 HSPA1LP34931 641 aa27.33■■□□□ 1.97
GPC1-203ENST00000425056 IQGAP3Q86VI3 1631 aa27.3■■□□□ 1.96
GPC1-203ENST00000425056 MYO5BQ9ULV0 1848 aa27.3■■□□□ 1.96
GPC1-203ENST00000425056 E9PCH4 1651 aa27.29■■□□□ 1.96
GPC1-203ENST00000425056 TMEM131LA2VDJ0 1609 aa27.27■■□□□ 1.96
GPC1-203ENST00000425056 ZFYVE9O95405 1425 aa27.25■■□□□ 1.95
GPC1-203ENST00000425056 MED1Q15648 1581 aaPredicted RBP27.25■■□□□ 1.95
GPC1-203ENST00000425056 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
GPC1-203ENST00000425056 NKTRP30414 1462 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms