RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 FBXO31Q5XUX0 539 aaPredicted RBP28.85■■■□□ 2.21
NUP50-207ENST00000424634 FGD6Q6ZV73 1430 aa28.85■■■□□ 2.21
NUP50-207ENST00000424634 KDM5DQ9BY66 1539 aa28.84■■■□□ 2.21
NUP50-207ENST00000424634 CAMSAP1Q5T5Y3 1602 aa28.83■■■□□ 2.21
NUP50-207ENST00000424634 CERKQ8TCT0 537 aa28.82■■■□□ 2.2
NUP50-207ENST00000424634 PTPRTO14522 1441 aa28.82■■■□□ 2.2
NUP50-207ENST00000424634 FAM135AQ9P2D6 1515 aa28.82■■■□□ 2.2
NUP50-207ENST00000424634 ZNF142P52746 1687 aaPredicted RBP28.82■■■□□ 2.2
NUP50-207ENST00000424634 TCOF1Q13428 1488 aaKnown RBP28.81■■■□□ 2.2
NUP50-207ENST00000424634 RNF17Q9BXT8 1623 aaKnown RBP28.8■■■□□ 2.2
NUP50-207ENST00000424634 CEP170BQ9Y4F5 1589 aaPredicted RBP28.8■■■□□ 2.2
NUP50-207ENST00000424634 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
NUP50-207ENST00000424634 PZPP20742 1482 aa28.78■■■□□ 2.2
NUP50-207ENST00000424634 EIF2AK4Q9P2K8 1649 aaKnown RBP28.78■■■□□ 2.2
NUP50-207ENST00000424634 DAPK1P53355 1430 aa28.77■■■□□ 2.2
NUP50-207ENST00000424634 NCKAP5LQ9HCH0 1330 aa28.77■■■□□ 2.2
NUP50-207ENST00000424634 DUOX2Q9NRD8 1548 aa28.77■■■□□ 2.2
NUP50-207ENST00000424634 SHANK2Q9UPX8 1470 aa28.77■■■□□ 2.2
NUP50-207ENST00000424634 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.2
NUP50-207ENST00000424634 RRP7BPQ9NSQ0 103 aa28.76■■■□□ 2.19
NUP50-207ENST00000424634 MROH1Q8NDA8 1641 aa28.75■■■□□ 2.19
NUP50-207ENST00000424634 TNRQ92752 1358 aa28.75■■■□□ 2.19
NUP50-207ENST00000424634 KIF15Q9NS87 1388 aa28.75■■■□□ 2.19
NUP50-207ENST00000424634 A2ML1A8K2U0 1454 aa28.73■■■□□ 2.19
NUP50-207ENST00000424634 ABCC3O15438 1527 aa28.73■■■□□ 2.19
NUP50-207ENST00000424634 PLA2R1Q13018 1463 aa28.71■■■□□ 2.19
NUP50-207ENST00000424634 CHIC2Q9UKJ5 165 aa28.7■■■□□ 2.18
NUP50-207ENST00000424634 PKD2Q13563 968 aa28.68■■■□□ 2.18
NUP50-207ENST00000424634 ZC3H13Q5T200 1668 aaKnown RBP28.67■■■□□ 2.18
NUP50-207ENST00000424634 CEP152O94986 1710 aa28.66■■■□□ 2.18
NUP50-207ENST00000424634 ERBINQ96RT1 1412 aa28.66■■■□□ 2.18
NUP50-207ENST00000424634 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
NUP50-207ENST00000424634 FAM50AQ14320 339 aaKnown RBP28.64■■■□□ 2.18
NUP50-207ENST00000424634 CFAP65Q6ZU64 1925 aaKnown RBP28.64■■■□□ 2.18
NUP50-207ENST00000424634 ANKRD30AQ9BXX3 1397 aa28.62■■■□□ 2.17
NUP50-207ENST00000424634 PRDM15P57071 1507 aaPredicted RBP28.6■■■□□ 2.17
NUP50-207ENST00000424634 SPATA31D1Q6ZQQ2 1576 aa28.6■■■□□ 2.17
NUP50-207ENST00000424634 NLRP1Q9C000 1473 aa28.59■■■□□ 2.17
NUP50-207ENST00000424634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.59■■■□□ 2.171e-6■■■□□ 18.9
NUP50-207ENST00000424634 ERVK-7P63135 1459 aa28.58■■■□□ 2.17
NUP50-207ENST00000424634 DEPDC5O75140 1603 aa28.58■■■□□ 2.17
NUP50-207ENST00000424634 ADGRL2O95490 1459 aa28.56■■■□□ 2.16
NUP50-207ENST00000424634 THEMISQ8N1K5 641 aaPredicted RBP28.56■■■□□ 2.16
NUP50-207ENST00000424634 ZNF335Q9H4Z2 1342 aaPredicted RBP28.56■■■□□ 2.16
NUP50-207ENST00000424634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.56■■■□□ 2.16
NUP50-207ENST00000424634 UGGT1Q9NYU2 1555 aa28.55■■■□□ 2.16
NUP50-207ENST00000424634 PPARGC1BQ86YN6 1023 aaKnown RBP28.54■■■□□ 2.16
NUP50-207ENST00000424634 ARHGAP31Q2M1Z3 1444 aa28.52■■■□□ 2.16
NUP50-207ENST00000424634 POLR1AO95602 1720 aaPredicted RBP28.52■■■□□ 2.16
NUP50-207ENST00000424634 NEURL4Q96JN8 1562 aa28.52■■■□□ 2.16
NUP50-207ENST00000424634 ANKLE2Q86XL3 938 aa28.5■■■□□ 2.15
NUP50-207ENST00000424634 KANK1Q14678 1352 aa28.49■■■□□ 2.15
NUP50-207ENST00000424634 VWDEQ8N2E2 1590 aa28.48■■■□□ 2.15
NUP50-207ENST00000424634 LMTK2Q8IWU2 1503 aa28.44■■■□□ 2.14
NUP50-207ENST00000424634 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
NUP50-207ENST00000424634 IQSEC2Q5JU85 1478 aa28.43■■■□□ 2.14
NUP50-207ENST00000424634 UBR1Q8IWV7 1749 aa28.43■■■□□ 2.14
NUP50-207ENST00000424634 MED14O60244 1454 aa28.42■■■□□ 2.14
NUP50-207ENST00000424634 NPHP4O75161 1426 aaPredicted RBP28.39■■■□□ 2.14
NUP50-207ENST00000424634 ROCK1Q13464 1354 aa28.35■■■□□ 2.13
NUP50-207ENST00000424634 EFCAB6Q5THR3 1501 aa28.34■■■□□ 2.13
NUP50-207ENST00000424634 PIK3C2BO00750 1634 aa28.34■■■□□ 2.13
NUP50-207ENST00000424634 ITGAEP38570 1179 aa28.34■■■□□ 2.13
NUP50-207ENST00000424634 IDI1Q13907 227 aa28.34■■■□□ 2.13
NUP50-207ENST00000424634 IQGAP1P46940 1657 aa28.33■■■□□ 2.13
NUP50-207ENST00000424634 LTKP29376 864 aa28.33■■■□□ 2.13
NUP50-207ENST00000424634 NOS1P29475 1434 aa28.32■■■□□ 2.12
NUP50-207ENST00000424634 ARHGAP23Q9P227 1491 aa28.32■■■□□ 2.12
NUP50-207ENST00000424634 SYNMO15061 1565 aa28.32■■■□□ 2.12
NUP50-207ENST00000424634 SLIT1O75093 1534 aa28.3■■■□□ 2.12
NUP50-207ENST00000424634 TXNDC2Q86VQ3 553 aa28.29■■■□□ 2.12
NUP50-207ENST00000424634 SCAF11Q99590 1463 aaKnown RBP28.27■■■□□ 2.12
NUP50-207ENST00000424634 UBAP1LF5GYI3 381 aa28.27■■■□□ 2.12
NUP50-207ENST00000424634 UNC13BO14795 1591 aa28.27■■■□□ 2.12
NUP50-207ENST00000424634 CPS1P31327 1500 aa28.27■■■□□ 2.12
NUP50-207ENST00000424634 STAG3Q9UJ98 1225 aa28.25■■■□□ 2.11
NUP50-207ENST00000424634 TET3O43151 1660 aa28.25■■■□□ 2.11
NUP50-207ENST00000424634 TMEM2Q9UHN6 1383 aa28.24■■■□□ 2.11
NUP50-207ENST00000424634 STRCP1A6NGW2 1772 aa28.24■■■□□ 2.11
NUP50-207ENST00000424634 KDM5AP29375 1690 aaKnown RBP28.23■■■□□ 2.11
NUP50-207ENST00000424634 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
NUP50-207ENST00000424634 SLC52A1Q9NWF4 448 aa28.22■■■□□ 2.11
NUP50-207ENST00000424634 EID1Q9Y6B2 187 aa28.21■■■□□ 2.11
NUP50-207ENST00000424634 GCC2Q8IWJ2 1684 aa28.2■■■□□ 2.11
NUP50-207ENST00000424634 RRBP1Q9P2E9 1410 aaKnown RBP28.19■■■□□ 2.1
NUP50-207ENST00000424634 E9PCH4 1651 aa28.16■■■□□ 2.1
NUP50-207ENST00000424634 IQGAP3Q86VI3 1631 aa28.16■■■□□ 2.1
NUP50-207ENST00000424634 ADGRB3O60242 1522 aa28.16■■■□□ 2.1
NUP50-207ENST00000424634 NUP155O75694 1391 aa28.15■■■□□ 2.1
NUP50-207ENST00000424634 MYO5BQ9ULV0 1848 aa28.13■■■□□ 2.09
NUP50-207ENST00000424634 LRRC7Q96NW7 1537 aa28.13■■■□□ 2.09
NUP50-207ENST00000424634 TOM1O60784 492 aa28.09■■■□□ 2.09
NUP50-207ENST00000424634 TMEM131LA2VDJ0 1609 aa28.08■■■□□ 2.09
NUP50-207ENST00000424634 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
NUP50-207ENST00000424634 PIP4K2BP78356 416 aa28.07■■■□□ 2.08
NUP50-207ENST00000424634 SLC26A8Q96RN1 970 aa28.06■■■□□ 2.08
NUP50-207ENST00000424634 ZFYVE9O95405 1425 aa28.05■■■□□ 2.08
NUP50-207ENST00000424634 NAIPQ13075 1403 aa28.03■■■□□ 2.08
NUP50-207ENST00000424634 SCAF1Q9H7N4 1312 aaKnown RBP28.03■■■□□ 2.08
NUP50-207ENST00000424634 CHGAP10645 457 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms