RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 NCOA1Q15788 1441 aa39.84■■■■□ 3.97
SMDT1-202ENST00000422252 PTPRTO14522 1441 aa39.82■■■■□ 3.97
SMDT1-202ENST00000422252 ZNF142P52746 1687 aaPredicted RBP39.82■■■■□ 3.96
SMDT1-202ENST00000422252 CAMSAP1Q5T5Y3 1602 aa39.81■■■■□ 3.96
SMDT1-202ENST00000422252 FGD6Q6ZV73 1430 aa39.81■■■■□ 3.96
SMDT1-202ENST00000422252 CEP170BQ9Y4F5 1589 aaPredicted RBP39.79■■■■□ 3.96
SMDT1-202ENST00000422252 ABCC5O15440 1437 aa39.78■■■■□ 3.96
SMDT1-202ENST00000422252 PZPP20742 1482 aa39.78■■■■□ 3.96
SMDT1-202ENST00000422252 CERKQ8TCT0 537 aa39.78■■■■□ 3.96
SMDT1-202ENST00000422252 SHANK2Q9UPX8 1470 aa39.78■■■■□ 3.96
SMDT1-202ENST00000422252 RNF17Q9BXT8 1623 aaKnown RBP39.77■■■■□ 3.96
SMDT1-202ENST00000422252 EIF2AK4Q9P2K8 1649 aaKnown RBP39.77■■■■□ 3.96
SMDT1-202ENST00000422252 TCOF1Q13428 1488 aaKnown RBP39.76■■■■□ 3.96
SMDT1-202ENST00000422252 CROCC2H7BZ55 1655 aa39.75■■■■□ 3.95
SMDT1-202ENST00000422252 DUOX2Q9NRD8 1548 aa39.74■■■■□ 3.95
SMDT1-202ENST00000422252 FBXO31Q5XUX0 539 aaPredicted RBP39.73■■■■□ 3.95
SMDT1-202ENST00000422252 DAPK1P53355 1430 aa39.72■■■■□ 3.95
SMDT1-202ENST00000422252 TNRQ92752 1358 aa39.71■■■■□ 3.95
SMDT1-202ENST00000422252 A2ML1A8K2U0 1454 aa39.7■■■■□ 3.95
SMDT1-202ENST00000422252 DNMT1P26358 1616 aaKnown RBP39.7■■■■□ 3.95
SMDT1-202ENST00000422252 PLA2R1Q13018 1463 aa39.69■■■■□ 3.94
SMDT1-202ENST00000422252 KIF15Q9NS87 1388 aa39.69■■■■□ 3.94
SMDT1-202ENST00000422252 ABCC3O15438 1527 aa39.66■■■■□ 3.94
SMDT1-202ENST00000422252 NCKAP5LQ9HCH0 1330 aa39.65■■■■□ 3.94
SMDT1-202ENST00000422252 ZC3H13Q5T200 1668 aaKnown RBP39.65■■■■□ 3.94
SMDT1-202ENST00000422252 RRP7BPQ9NSQ0 103 aa39.65■■■■□ 3.94
SMDT1-202ENST00000422252 MROH1Q8NDA8 1641 aa39.64■■■■□ 3.94
SMDT1-202ENST00000422252 PKD2Q13563 968 aa39.63■■■■□ 3.93
SMDT1-202ENST00000422252 ERBINQ96RT1 1412 aa39.62■■■■□ 3.93
SMDT1-202ENST00000422252 CHIC2Q9UKJ5 165 aa39.55■■■■□ 3.92
SMDT1-202ENST00000422252 ANKRD30AQ9BXX3 1397 aa39.55■■■■□ 3.92
SMDT1-202ENST00000422252 NLRP1Q9C000 1473 aa39.54■■■■□ 3.92
SMDT1-202ENST00000422252 CEP152O94986 1710 aa39.52■■■■□ 3.92
SMDT1-202ENST00000422252 LTBP4Q8N2S1 1624 aa39.51■■■■□ 3.92
SMDT1-202ENST00000422252 PRDM15P57071 1507 aaPredicted RBP39.51■■■■□ 3.92
SMDT1-202ENST00000422252 FAM50AQ14320 339 aaKnown RBP39.51■■■■□ 3.92
SMDT1-202ENST00000422252 SPATA31D1Q6ZQQ2 1576 aa39.5■■■■□ 3.91
SMDT1-202ENST00000422252 ERVK-7P63135 1459 aa39.47■■■■□ 3.91
SMDT1-202ENST00000422252 UGGT1Q9NYU2 1555 aa39.45■■■■□ 3.91
SMDT1-202ENST00000422252 DEPDC5O75140 1603 aa39.44■■■■□ 3.9
SMDT1-202ENST00000422252 THEMISQ8N1K5 641 aaPredicted RBP39.44■■■■□ 3.9
SMDT1-202ENST00000422252 ADGRL2O95490 1459 aa39.43■■■■□ 3.9
SMDT1-202ENST00000422252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.43■■■■□ 3.9
SMDT1-202ENST00000422252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.41■■■■□ 3.93e-8■■■□□ 16.5
SMDT1-202ENST00000422252 ARHGAP31Q2M1Z3 1444 aa39.4■■■■□ 3.9
SMDT1-202ENST00000422252 ZNF335Q9H4Z2 1342 aaPredicted RBP39.4■■■■□ 3.9
SMDT1-202ENST00000422252 KANK1Q14678 1352 aa39.39■■■■□ 3.9
SMDT1-202ENST00000422252 POLR1AO95602 1720 aaPredicted RBP39.39■■■■□ 3.9
SMDT1-202ENST00000422252 ANKLE2Q86XL3 938 aa39.36■■■■□ 3.89
SMDT1-202ENST00000422252 NEURL4Q96JN8 1562 aa39.35■■■■□ 3.89
SMDT1-202ENST00000422252 IQSEC2Q5JU85 1478 aa39.35■■■■□ 3.89
SMDT1-202ENST00000422252 CFAP65Q6ZU64 1925 aaKnown RBP39.32■■■■□ 3.89
SMDT1-202ENST00000422252 LMTK2Q8IWU2 1503 aa39.29■■■■□ 3.88
SMDT1-202ENST00000422252 VWDEQ8N2E2 1590 aa39.29■■■■□ 3.88
SMDT1-202ENST00000422252 ANKRD50Q9ULJ7 1429 aa39.26■■■■□ 3.88
SMDT1-202ENST00000422252 MED14O60244 1454 aa39.24■■■■□ 3.87
SMDT1-202ENST00000422252 PPARGC1BQ86YN6 1023 aaKnown RBP39.22■■■■□ 3.87
SMDT1-202ENST00000422252 NPHP4O75161 1426 aaPredicted RBP39.22■■■■□ 3.87
SMDT1-202ENST00000422252 UBR1Q8IWV7 1749 aa39.21■■■■□ 3.87
SMDT1-202ENST00000422252 EFCAB6Q5THR3 1501 aa39.15■■■■□ 3.86
SMDT1-202ENST00000422252 ROCK1Q13464 1354 aa39.14■■■■□ 3.86
SMDT1-202ENST00000422252 IQGAP1P46940 1657 aa39.13■■■■□ 3.86
SMDT1-202ENST00000422252 PIK3C2BO00750 1634 aa39.1■■■■□ 3.85
SMDT1-202ENST00000422252 CPS1P31327 1500 aa39.09■■■■□ 3.85
SMDT1-202ENST00000422252 ARHGAP23Q9P227 1491 aa39.09■■■■□ 3.85
SMDT1-202ENST00000422252 SLIT1O75093 1534 aa39.09■■■■□ 3.85
SMDT1-202ENST00000422252 NOS1P29475 1434 aa39.07■■■■□ 3.85
SMDT1-202ENST00000422252 SCAF11Q99590 1463 aaKnown RBP39.07■■■■□ 3.85
SMDT1-202ENST00000422252 SYNMO15061 1565 aa39.06■■■■□ 3.84
SMDT1-202ENST00000422252 ITGAEP38570 1179 aa39.05■■■■□ 3.84
SMDT1-202ENST00000422252 IDI1Q13907 227 aa39.05■■■■□ 3.84
SMDT1-202ENST00000422252 STAG3Q9UJ98 1225 aa39.05■■■■□ 3.84
SMDT1-202ENST00000422252 UBAP1LF5GYI3 381 aa39.03■■■■□ 3.84
SMDT1-202ENST00000422252 LTKP29376 864 aa39.03■■■■□ 3.84
SMDT1-202ENST00000422252 TXNDC2Q86VQ3 553 aa39.03■■■■□ 3.84
SMDT1-202ENST00000422252 RPRD2Q5VT52 1461 aaKnown RBP39.03■■■■□ 3.84
SMDT1-202ENST00000422252 UNC13BO14795 1591 aa39.03■■■■□ 3.84
SMDT1-202ENST00000422252 TET3O43151 1660 aa39■■■■□ 3.83
SMDT1-202ENST00000422252 KDM5AP29375 1690 aaKnown RBP39■■■■□ 3.83
SMDT1-202ENST00000422252 EID1Q9Y6B2 187 aa39■■■■□ 3.83
SMDT1-202ENST00000422252 TMEM2Q9UHN6 1383 aa38.99■■■■□ 3.83
SMDT1-202ENST00000422252 SLC52A1Q9NWF4 448 aa38.97■■■■□ 3.83
SMDT1-202ENST00000422252 GCC2Q8IWJ2 1684 aa38.93■■■■□ 3.82
SMDT1-202ENST00000422252 ADGRB3O60242 1522 aa38.91■■■■□ 3.82
SMDT1-202ENST00000422252 RRBP1Q9P2E9 1410 aaKnown RBP38.9■■■■□ 3.82
SMDT1-202ENST00000422252 IQGAP3Q86VI3 1631 aa38.88■■■■□ 3.81
SMDT1-202ENST00000422252 STRCP1A6NGW2 1772 aa38.87■■■■□ 3.81
SMDT1-202ENST00000422252 NUP155O75694 1391 aa38.84■■■■□ 3.81
SMDT1-202ENST00000422252 TOM1O60784 492 aa38.83■■■■□ 3.81
SMDT1-202ENST00000422252 E9PCH4 1651 aa38.82■■■■□ 3.81
SMDT1-202ENST00000422252 LRRC7Q96NW7 1537 aa38.81■■■■□ 3.8
SMDT1-202ENST00000422252 SCAF1Q9H7N4 1312 aaKnown RBP38.75■■■■□ 3.79
SMDT1-202ENST00000422252 PIP4K2BP78356 416 aa38.74■■■■□ 3.79
SMDT1-202ENST00000422252 TMEM131LA2VDJ0 1609 aa38.72■■■■□ 3.79
SMDT1-202ENST00000422252 ZFYVE9O95405 1425 aa38.7■■■■□ 3.79
SMDT1-202ENST00000422252 MYO5BQ9ULV0 1848 aa38.7■■■■□ 3.79
SMDT1-202ENST00000422252 RIMS2Q9UQ26 1411 aa38.67■■■■□ 3.78
SMDT1-202ENST00000422252 CHGAP10645 457 aaKnown RBP38.67■■■■□ 3.78
SMDT1-202ENST00000422252 SLC26A8Q96RN1 970 aa38.67■■■■□ 3.78
SMDT1-202ENST00000422252 ALKQ9UM73 1620 aa38.67■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms