RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FAM135AQ9P2D6 1515 aa26.95■■□□□ 1.9
UPF3AP3-201ENST00000420996 KDM5DQ9BY66 1539 aa26.92■■□□□ 1.9
UPF3AP3-201ENST00000420996 ILDR2Q71H61 639 aa26.92■■□□□ 1.9
UPF3AP3-201ENST00000420996 ARHGEF5Q12774 1597 aa26.9■■□□□ 1.9
UPF3AP3-201ENST00000420996 PZPP20742 1482 aa26.9■■□□□ 1.9
UPF3AP3-201ENST00000420996 TNRQ92752 1358 aa26.9■■□□□ 1.9
UPF3AP3-201ENST00000420996 FBXO31Q5XUX0 539 aaPredicted RBP26.9■■□□□ 1.9
UPF3AP3-201ENST00000420996 WASHC2CQ9Y4E1 1318 aa26.89■■□□□ 1.89
UPF3AP3-201ENST00000420996 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
UPF3AP3-201ENST00000420996 UBAP1LF5GYI3 381 aa26.88■■□□□ 1.89
UPF3AP3-201ENST00000420996 TSPY4P0CV99 314 aa26.87■■□□□ 1.89
UPF3AP3-201ENST00000420996 TSPY10P0CW01 314 aa26.87■■□□□ 1.89
UPF3AP3-201ENST00000420996 POLR1AO95602 1720 aaPredicted RBP26.86■■□□□ 1.89
UPF3AP3-201ENST00000420996 LRRC9Q6ZRR7 1453 aa26.82■■□□□ 1.88
UPF3AP3-201ENST00000420996 VPS8Q8N3P4 1428 aa26.82■■□□□ 1.88
UPF3AP3-201ENST00000420996 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
UPF3AP3-201ENST00000420996 NEURL4Q96JN8 1562 aa26.81■■□□□ 1.88
UPF3AP3-201ENST00000420996 SOCS7O14512 581 aa26.81■■□□□ 1.88
UPF3AP3-201ENST00000420996 THEMISQ8N1K5 641 aaPredicted RBP26.79■■□□□ 1.88
UPF3AP3-201ENST00000420996 NLRP1Q9C000 1473 aa26.79■■□□□ 1.88
UPF3AP3-201ENST00000420996 ANKLE2Q86XL3 938 aa26.78■■□□□ 1.88
UPF3AP3-201ENST00000420996 MAST1Q9Y2H9 1570 aa26.78■■□□□ 1.88
UPF3AP3-201ENST00000420996 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
UPF3AP3-201ENST00000420996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.76■■□□□ 1.87
UPF3AP3-201ENST00000420996 CPS1P31327 1500 aa26.75■■□□□ 1.87
UPF3AP3-201ENST00000420996 UGGT1Q9NYU2 1555 aa26.75■■□□□ 1.87
UPF3AP3-201ENST00000420996 SHANK2Q9UPX8 1470 aa26.74■■□□□ 1.87
UPF3AP3-201ENST00000420996 MAP3K1Q13233 1512 aa26.74■■□□□ 1.87
UPF3AP3-201ENST00000420996 LOC105371045A0A1W2PR82 267 aa26.73■■□□□ 1.87
UPF3AP3-201ENST00000420996 ZC3H13Q5T200 1668 aaKnown RBP26.73■■□□□ 1.87
UPF3AP3-201ENST00000420996 DEPDC5O75140 1603 aa26.72■■□□□ 1.87
UPF3AP3-201ENST00000420996 EIF2AK4Q9P2K8 1649 aaKnown RBP26.72■■□□□ 1.87
UPF3AP3-201ENST00000420996 ABCC3O15438 1527 aa26.71■■□□□ 1.87
UPF3AP3-201ENST00000420996 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
UPF3AP3-201ENST00000420996 MED14O60244 1454 aa26.7■■□□□ 1.87
UPF3AP3-201ENST00000420996 MYOM3Q5VTT5 1437 aa26.69■■□□□ 1.86
UPF3AP3-201ENST00000420996 NPHP4O75161 1426 aaPredicted RBP26.68■■□□□ 1.86
UPF3AP3-201ENST00000420996 VWDEQ8N2E2 1590 aa26.67■■□□□ 1.86
UPF3AP3-201ENST00000420996 TOM1O60784 492 aa26.67■■□□□ 1.86
UPF3AP3-201ENST00000420996 MROH1Q8NDA8 1641 aa26.65■■□□□ 1.86
UPF3AP3-201ENST00000420996 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
UPF3AP3-201ENST00000420996 ERVK-7P63135 1459 aa26.63■■□□□ 1.85
UPF3AP3-201ENST00000420996 DUOX2Q9NRD8 1548 aa26.63■■□□□ 1.85
UPF3AP3-201ENST00000420996 SCAF1Q9H7N4 1312 aaKnown RBP26.63■■□□□ 1.85
UPF3AP3-201ENST00000420996 PIP4K2BP78356 416 aa26.62■■□□□ 1.85
UPF3AP3-201ENST00000420996 CEP152O94986 1710 aa26.62■■□□□ 1.85
UPF3AP3-201ENST00000420996 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
UPF3AP3-201ENST00000420996 HSPA1LP34931 641 aa26.6■■□□□ 1.85
UPF3AP3-201ENST00000420996 UBR1Q8IWV7 1749 aa26.56■■□□□ 1.84
UPF3AP3-201ENST00000420996 KIF15Q9NS87 1388 aa26.54■■□□□ 1.84
UPF3AP3-201ENST00000420996 CROCC2H7BZ55 1655 aa26.54■■□□□ 1.84
UPF3AP3-201ENST00000420996 STRCP1A6NGW2 1772 aa26.53■■□□□ 1.84
UPF3AP3-201ENST00000420996 ABCC5O15440 1437 aa26.52■■□□□ 1.84
UPF3AP3-201ENST00000420996 PRDM15P57071 1507 aaPredicted RBP26.52■■□□□ 1.84
UPF3AP3-201ENST00000420996 ARHGAP31Q2M1Z3 1444 aa26.52■■□□□ 1.84
UPF3AP3-201ENST00000420996 ERBINQ96RT1 1412 aa26.52■■□□□ 1.84
UPF3AP3-201ENST00000420996 ALKQ9UM73 1620 aa26.52■■□□□ 1.84
UPF3AP3-201ENST00000420996 PTPN23Q9H3S7 1636 aa26.51■■□□□ 1.83
UPF3AP3-201ENST00000420996 RRP7BPQ9NSQ0 103 aa26.5■■□□□ 1.83
UPF3AP3-201ENST00000420996 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
UPF3AP3-201ENST00000420996 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
UPF3AP3-201ENST00000420996 APLP2Q06481 763 aa26.49■■□□□ 1.83
UPF3AP3-201ENST00000420996 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
UPF3AP3-201ENST00000420996 SYNMO15061 1565 aa26.48■■□□□ 1.83
UPF3AP3-201ENST00000420996 ARHGAP23Q9P227 1491 aa26.48■■□□□ 1.83
UPF3AP3-201ENST00000420996 SLIT1O75093 1534 aa26.47■■□□□ 1.83
UPF3AP3-201ENST00000420996 DAPK1P53355 1430 aa26.46■■□□□ 1.83
UPF3AP3-201ENST00000420996 LTKP29376 864 aa26.45■■□□□ 1.82
UPF3AP3-201ENST00000420996 TXNDC2Q86VQ3 553 aa26.45■■□□□ 1.82
UPF3AP3-201ENST00000420996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.44■■□□□ 1.82
UPF3AP3-201ENST00000420996 KANK1Q14678 1352 aa26.43■■□□□ 1.82
UPF3AP3-201ENST00000420996 FGD6Q6ZV73 1430 aa26.42■■□□□ 1.82
UPF3AP3-201ENST00000420996 EID1Q9Y6B2 187 aa26.41■■□□□ 1.82
UPF3AP3-201ENST00000420996 PIK3C2BO00750 1634 aa26.4■■□□□ 1.82
UPF3AP3-201ENST00000420996 ANKRD30AQ9BXX3 1397 aa26.38■■□□□ 1.81
UPF3AP3-201ENST00000420996 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
UPF3AP3-201ENST00000420996 TMEM2Q9UHN6 1383 aa26.36■■□□□ 1.81
UPF3AP3-201ENST00000420996 LMTK2Q8IWU2 1503 aa26.36■■□□□ 1.81
UPF3AP3-201ENST00000420996 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
UPF3AP3-201ENST00000420996 STAG3Q9UJ98 1225 aa26.35■■□□□ 1.81
UPF3AP3-201ENST00000420996 XIRP1Q702N8 1843 aaKnown RBP26.33■■□□□ 1.81
UPF3AP3-201ENST00000420996 IDI1Q13907 227 aa26.32■■□□□ 1.8
UPF3AP3-201ENST00000420996 EFCAB6Q5THR3 1501 aa26.32■■□□□ 1.8
UPF3AP3-201ENST00000420996 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
UPF3AP3-201ENST00000420996 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
UPF3AP3-201ENST00000420996 NOS1P29475 1434 aa26.27■■□□□ 1.8
UPF3AP3-201ENST00000420996 ADGRL2O95490 1459 aa26.26■■□□□ 1.79
UPF3AP3-201ENST00000420996 TET3O43151 1660 aa26.24■■□□□ 1.79
UPF3AP3-201ENST00000420996 KCNA6P17658 529 aa26.23■■□□□ 1.79
UPF3AP3-201ENST00000420996 SLC52A1Q9NWF4 448 aa26.23■■□□□ 1.79
UPF3AP3-201ENST00000420996 ADGRB3O60242 1522 aa26.22■■□□□ 1.79
UPF3AP3-201ENST00000420996 SLC26A8Q96RN1 970 aa26.2■■□□□ 1.78
UPF3AP3-201ENST00000420996 FAM135BQ49AJ0 1406 aa26.2■■□□□ 1.78
UPF3AP3-201ENST00000420996 TMEM94Q12767 1356 aa26.2■■□□□ 1.78
UPF3AP3-201ENST00000420996 FAM50AQ14320 339 aaKnown RBP26.19■■□□□ 1.78
UPF3AP3-201ENST00000420996 RPRD2Q5VT52 1461 aaKnown RBP26.18■■□□□ 1.78
UPF3AP3-201ENST00000420996 ANKRD50Q9ULJ7 1429 aa26.18■■□□□ 1.78
UPF3AP3-201ENST00000420996 PROSER2Q86WR7 435 aaPredicted RBP26.17■■□□□ 1.78
UPF3AP3-201ENST00000420996 NWD1Q149M9 1564 aa26.13■■□□□ 1.77
UPF3AP3-201ENST00000420996 NKTRP30414 1462 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms