RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CAMSAP1Q5T5Y3 1602 aa27.5■■□□□ 1.99
PDLIM2-208ENST00000416159 KDM5DQ9BY66 1539 aa27.5■■□□□ 1.99
PDLIM2-208ENST00000416159 MYO3AQ8NEV4 1616 aa27.49■■□□□ 1.99
PDLIM2-208ENST00000416159 ZNF142P52746 1687 aaPredicted RBP27.47■■□□□ 1.99
PDLIM2-208ENST00000416159 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.99
PDLIM2-208ENST00000416159 PZPP20742 1482 aa27.44■■□□□ 1.98
PDLIM2-208ENST00000416159 FBXO31Q5XUX0 539 aaPredicted RBP27.44■■□□□ 1.98
PDLIM2-208ENST00000416159 PTPN23Q9H3S7 1636 aa27.43■■□□□ 1.98
PDLIM2-208ENST00000416159 PKD2Q13563 968 aa27.43■■□□□ 1.98
PDLIM2-208ENST00000416159 PLA2R1Q13018 1463 aa27.43■■□□□ 1.98
PDLIM2-208ENST00000416159 NCKAP5LQ9HCH0 1330 aa27.42■■□□□ 1.98
PDLIM2-208ENST00000416159 TNRQ92752 1358 aa27.42■■□□□ 1.98
PDLIM2-208ENST00000416159 A2ML1A8K2U0 1454 aa27.42■■□□□ 1.98
PDLIM2-208ENST00000416159 EIF2AK4Q9P2K8 1649 aaKnown RBP27.41■■□□□ 1.98
PDLIM2-208ENST00000416159 ABCC5O15440 1437 aa27.41■■□□□ 1.98
PDLIM2-208ENST00000416159 FGD6Q6ZV73 1430 aa27.41■■□□□ 1.98
PDLIM2-208ENST00000416159 RNF17Q9BXT8 1623 aaKnown RBP27.4■■□□□ 1.98
PDLIM2-208ENST00000416159 DUOX2Q9NRD8 1548 aa27.39■■□□□ 1.98
PDLIM2-208ENST00000416159 SHANK2Q9UPX8 1470 aa27.38■■□□□ 1.97
PDLIM2-208ENST00000416159 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
PDLIM2-208ENST00000416159 KIF15Q9NS87 1388 aa27.35■■□□□ 1.97
PDLIM2-208ENST00000416159 DAPK1P53355 1430 aa27.35■■□□□ 1.97
PDLIM2-208ENST00000416159 DNMT1P26358 1616 aaKnown RBP27.34■■□□□ 1.97
PDLIM2-208ENST00000416159 RRP7BPQ9NSQ0 103 aa27.34■■□□□ 1.97
PDLIM2-208ENST00000416159 CROCC2H7BZ55 1655 aa27.33■■□□□ 1.97
PDLIM2-208ENST00000416159 ABCC3O15438 1527 aa27.33■■□□□ 1.97
PDLIM2-208ENST00000416159 ZC3H13Q5T200 1668 aaKnown RBP27.33■■□□□ 1.97
PDLIM2-208ENST00000416159 LTBP4Q8N2S1 1624 aa27.31■■□□□ 1.96
PDLIM2-208ENST00000416159 ERBINQ96RT1 1412 aa27.3■■□□□ 1.96
PDLIM2-208ENST00000416159 NLRP1Q9C000 1473 aa27.3■■□□□ 1.96
PDLIM2-208ENST00000416159 MROH1Q8NDA8 1641 aa27.29■■□□□ 1.96
PDLIM2-208ENST00000416159 THEMISQ8N1K5 641 aaPredicted RBP27.28■■□□□ 1.96
PDLIM2-208ENST00000416159 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
PDLIM2-208ENST00000416159 CHIC2Q9UKJ5 165 aa27.27■■□□□ 1.96
PDLIM2-208ENST00000416159 SPATA31D1Q6ZQQ2 1576 aa27.24■■□□□ 1.95
PDLIM2-208ENST00000416159 ANKLE2Q86XL3 938 aa27.24■■□□□ 1.95
PDLIM2-208ENST00000416159 IQSEC2Q5JU85 1478 aa27.24■■□□□ 1.95
PDLIM2-208ENST00000416159 ZNF335Q9H4Z2 1342 aaPredicted RBP27.23■■□□□ 1.95
PDLIM2-208ENST00000416159 CEP152O94986 1710 aa27.23■■□□□ 1.95
PDLIM2-208ENST00000416159 UGGT1Q9NYU2 1555 aa27.22■■□□□ 1.95
PDLIM2-208ENST00000416159 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
PDLIM2-208ENST00000416159 FAM50AQ14320 339 aaKnown RBP27.22■■□□□ 1.95
PDLIM2-208ENST00000416159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.95
PDLIM2-208ENST00000416159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.21■■□□□ 1.95
PDLIM2-208ENST00000416159 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
PDLIM2-208ENST00000416159 CFAP65Q6ZU64 1925 aaKnown RBP27.2■■□□□ 1.95
PDLIM2-208ENST00000416159 KANK1Q14678 1352 aa27.2■■□□□ 1.94
PDLIM2-208ENST00000416159 POLR1AO95602 1720 aaPredicted RBP27.19■■□□□ 1.94
PDLIM2-208ENST00000416159 ARHGAP31Q2M1Z3 1444 aa27.18■■□□□ 1.94
PDLIM2-208ENST00000416159 DEPDC5O75140 1603 aa27.16■■□□□ 1.94
PDLIM2-208ENST00000416159 ADGRL2O95490 1459 aa27.15■■□□□ 1.94
PDLIM2-208ENST00000416159 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
PDLIM2-208ENST00000416159 MED14O60244 1454 aa27.11■■□□□ 1.93
PDLIM2-208ENST00000416159 NPHP4O75161 1426 aaPredicted RBP27.1■■□□□ 1.93
PDLIM2-208ENST00000416159 LMTK2Q8IWU2 1503 aa27.08■■□□□ 1.93
PDLIM2-208ENST00000416159 VWDEQ8N2E2 1590 aa27.07■■□□□ 1.92
PDLIM2-208ENST00000416159 ANKRD50Q9ULJ7 1429 aa27.06■■□□□ 1.92
PDLIM2-208ENST00000416159 UBR1Q8IWV7 1749 aa27.04■■□□□ 1.92
PDLIM2-208ENST00000416159 UBAP1LF5GYI3 381 aa27.03■■□□□ 1.92
PDLIM2-208ENST00000416159 CPS1P31327 1500 aa27.03■■□□□ 1.92
PDLIM2-208ENST00000416159 IQGAP1P46940 1657 aa27.01■■□□□ 1.91
PDLIM2-208ENST00000416159 TXNDC2Q86VQ3 553 aa26.99■■□□□ 1.91
PDLIM2-208ENST00000416159 STAG3Q9UJ98 1225 aa26.99■■□□□ 1.91
PDLIM2-208ENST00000416159 SLIT1O75093 1534 aa26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 IDI1Q13907 227 aa26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 EID1Q9Y6B2 187 aa26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 SCAF11Q99590 1463 aaKnown RBP26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 ARHGAP23Q9P227 1491 aa26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 ROCK1Q13464 1354 aa26.97■■□□□ 1.91
PDLIM2-208ENST00000416159 LTKP29376 864 aa26.96■■□□□ 1.91
PDLIM2-208ENST00000416159 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
PDLIM2-208ENST00000416159 EFCAB6Q5THR3 1501 aa26.95■■□□□ 1.91
PDLIM2-208ENST00000416159 PIK3C2BO00750 1634 aa26.95■■□□□ 1.91
PDLIM2-208ENST00000416159 NOS1P29475 1434 aa26.95■■□□□ 1.9
PDLIM2-208ENST00000416159 SLC52A1Q9NWF4 448 aa26.93■■□□□ 1.9
PDLIM2-208ENST00000416159 TMEM2Q9UHN6 1383 aa26.92■■□□□ 1.9
PDLIM2-208ENST00000416159 RPRD2Q5VT52 1461 aaKnown RBP26.92■■□□□ 1.9
PDLIM2-208ENST00000416159 TOM1O60784 492 aa26.91■■□□□ 1.9
PDLIM2-208ENST00000416159 KDM5AP29375 1690 aaKnown RBP26.91■■□□□ 1.9
PDLIM2-208ENST00000416159 SYNMO15061 1565 aa26.9■■□□□ 1.9
PDLIM2-208ENST00000416159 ITGAEP38570 1179 aa26.89■■□□□ 1.9
PDLIM2-208ENST00000416159 TET3O43151 1660 aa26.87■■□□□ 1.89
PDLIM2-208ENST00000416159 UNC13BO14795 1591 aa26.86■■□□□ 1.89
PDLIM2-208ENST00000416159 STRCP1A6NGW2 1772 aa26.83■■□□□ 1.89
PDLIM2-208ENST00000416159 ADGRB3O60242 1522 aa26.82■■□□□ 1.88
PDLIM2-208ENST00000416159 GCC2Q8IWJ2 1684 aa26.82■■□□□ 1.88
PDLIM2-208ENST00000416159 LRRC7Q96NW7 1537 aa26.81■■□□□ 1.88
PDLIM2-208ENST00000416159 SCAF1Q9H7N4 1312 aaKnown RBP26.81■■□□□ 1.88
PDLIM2-208ENST00000416159 PIP4K2BP78356 416 aa26.8■■□□□ 1.88
PDLIM2-208ENST00000416159 DISP3Q9P2K9 1392 aa26.8■■□□□ 1.88
PDLIM2-208ENST00000416159 NUP155O75694 1391 aa26.78■■□□□ 1.88
PDLIM2-208ENST00000416159 IQGAP3Q86VI3 1631 aa26.76■■□□□ 1.87
PDLIM2-208ENST00000416159 HDGFP51858 240 aaKnown RBP26.76■■□□□ 1.87
PDLIM2-208ENST00000416159 RRBP1Q9P2E9 1410 aaKnown RBP26.75■■□□□ 1.87
PDLIM2-208ENST00000416159 E9PCH4 1651 aa26.73■■□□□ 1.87
PDLIM2-208ENST00000416159 HSPA1LP34931 641 aa26.72■■□□□ 1.87
PDLIM2-208ENST00000416159 KCNA6P17658 529 aa26.71■■□□□ 1.87
PDLIM2-208ENST00000416159 BCANQ96GW7 911 aa26.71■■□□□ 1.87
PDLIM2-208ENST00000416159 SLC26A8Q96RN1 970 aa26.71■■□□□ 1.87
PDLIM2-208ENST00000416159 CHGAP10645 457 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms