RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 WASHC2CQ9Y4E1 1318 aa24.73■■□□□ 1.55
SBDSP1-201ENST00000415772 UBAP1LF5GYI3 381 aa24.73■■□□□ 1.55
SBDSP1-201ENST00000415772 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
SBDSP1-201ENST00000415772 TCOF1Q13428 1488 aaKnown RBP24.71■■□□□ 1.55
SBDSP1-201ENST00000415772 SPATA31D1Q6ZQQ2 1576 aa24.71■■□□□ 1.55
SBDSP1-201ENST00000415772 TNRQ92752 1358 aa24.7■■□□□ 1.55
SBDSP1-201ENST00000415772 FAM135AQ9P2D6 1515 aa24.68■■□□□ 1.54
SBDSP1-201ENST00000415772 DNMT1P26358 1616 aaKnown RBP24.68■■□□□ 1.54
SBDSP1-201ENST00000415772 FBXO31Q5XUX0 539 aaPredicted RBP24.66■■□□□ 1.54
SBDSP1-201ENST00000415772 PZPP20742 1482 aa24.65■■□□□ 1.54
SBDSP1-201ENST00000415772 ARHGEF5Q12774 1597 aa24.65■■□□□ 1.54
SBDSP1-201ENST00000415772 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
SBDSP1-201ENST00000415772 POLR1AO95602 1720 aaPredicted RBP24.62■■□□□ 1.53
SBDSP1-201ENST00000415772 ILDR2Q71H61 639 aa24.62■■□□□ 1.53
SBDSP1-201ENST00000415772 ANKLE2Q86XL3 938 aa24.61■■□□□ 1.53
SBDSP1-201ENST00000415772 THEMISQ8N1K5 641 aaPredicted RBP24.61■■□□□ 1.53
SBDSP1-201ENST00000415772 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
SBDSP1-201ENST00000415772 LRRC9Q6ZRR7 1453 aa24.6■■□□□ 1.53
SBDSP1-201ENST00000415772 SOCS7O14512 581 aa24.58■■□□□ 1.53
SBDSP1-201ENST00000415772 NLRP1Q9C000 1473 aa24.58■■□□□ 1.52
SBDSP1-201ENST00000415772 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.52
SBDSP1-201ENST00000415772 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
SBDSP1-201ENST00000415772 UGGT1Q9NYU2 1555 aa24.56■■□□□ 1.52
SBDSP1-201ENST00000415772 CPS1P31327 1500 aa24.55■■□□□ 1.52
SBDSP1-201ENST00000415772 TOM1O60784 492 aa24.54■■□□□ 1.52
SBDSP1-201ENST00000415772 PIP4K2BP78356 416 aa24.53■■□□□ 1.52
SBDSP1-201ENST00000415772 ZC3H13Q5T200 1668 aaKnown RBP24.53■■□□□ 1.52
SBDSP1-201ENST00000415772 NEURL4Q96JN8 1562 aa24.52■■□□□ 1.52
SBDSP1-201ENST00000415772 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
SBDSP1-201ENST00000415772 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
SBDSP1-201ENST00000415772 MAST1Q9Y2H9 1570 aa24.51■■□□□ 1.51
SBDSP1-201ENST00000415772 APLP2Q06481 763 aa24.51■■□□□ 1.51
SBDSP1-201ENST00000415772 RNF17Q9BXT8 1623 aaKnown RBP24.5■■□□□ 1.51
SBDSP1-201ENST00000415772 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
SBDSP1-201ENST00000415772 NPHP4O75161 1426 aaPredicted RBP24.49■■□□□ 1.51
SBDSP1-201ENST00000415772 MYOM3Q5VTT5 1437 aa24.49■■□□□ 1.51
SBDSP1-201ENST00000415772 ABCC3O15438 1527 aa24.47■■□□□ 1.51
SBDSP1-201ENST00000415772 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
SBDSP1-201ENST00000415772 KANK4Q5T7N3 995 aaPredicted RBP24.46■■□□□ 1.51
SBDSP1-201ENST00000415772 DEPDC5O75140 1603 aa24.46■■□□□ 1.51
SBDSP1-201ENST00000415772 DUOX2Q9NRD8 1548 aa24.43■■□□□ 1.5
SBDSP1-201ENST00000415772 IQGAP1P46940 1657 aa24.43■■□□□ 1.5
SBDSP1-201ENST00000415772 MED14O60244 1454 aa24.42■■□□□ 1.5
SBDSP1-201ENST00000415772 ERVK-7P63135 1459 aa24.42■■□□□ 1.5
SBDSP1-201ENST00000415772 CEP152O94986 1710 aa24.41■■□□□ 1.5
SBDSP1-201ENST00000415772 HSPA1LP34931 641 aa24.4■■□□□ 1.5
SBDSP1-201ENST00000415772 VWDEQ8N2E2 1590 aa24.39■■□□□ 1.5
SBDSP1-201ENST00000415772 KIF15Q9NS87 1388 aa24.38■■□□□ 1.49
SBDSP1-201ENST00000415772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.37■■□□□ 1.49
SBDSP1-201ENST00000415772 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
SBDSP1-201ENST00000415772 KANK1Q14678 1352 aa24.36■■□□□ 1.49
SBDSP1-201ENST00000415772 MROH1Q8NDA8 1641 aa24.35■■□□□ 1.49
SBDSP1-201ENST00000415772 STAG3Q9UJ98 1225 aa24.34■■□□□ 1.49
SBDSP1-201ENST00000415772 ERBINQ96RT1 1412 aa24.34■■□□□ 1.49
SBDSP1-201ENST00000415772 PTPN23Q9H3S7 1636 aa24.33■■□□□ 1.49
SBDSP1-201ENST00000415772 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
SBDSP1-201ENST00000415772 EID1Q9Y6B2 187 aa24.32■■□□□ 1.48
SBDSP1-201ENST00000415772 UBR1Q8IWV7 1749 aa24.32■■□□□ 1.48
SBDSP1-201ENST00000415772 CFAP65Q6ZU64 1925 aaKnown RBP24.31■■□□□ 1.48
SBDSP1-201ENST00000415772 SENP3Q9H4L4 574 aaPredicted RBP24.31■■□□□ 1.48
SBDSP1-201ENST00000415772 SCAF11Q99590 1463 aaKnown RBP24.31■■□□□ 1.48
SBDSP1-201ENST00000415772 SYNMO15061 1565 aa24.3■■□□□ 1.48
SBDSP1-201ENST00000415772 TXNDC2Q86VQ3 553 aa24.3■■□□□ 1.48
SBDSP1-201ENST00000415772 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
SBDSP1-201ENST00000415772 PRDM15P57071 1507 aaPredicted RBP24.3■■□□□ 1.48
SBDSP1-201ENST00000415772 MED1Q15648 1581 aaPredicted RBP24.29■■□□□ 1.48
SBDSP1-201ENST00000415772 ABCC5O15440 1437 aa24.28■■□□□ 1.48
SBDSP1-201ENST00000415772 DAPK1P53355 1430 aa24.27■■□□□ 1.48
SBDSP1-201ENST00000415772 ARHGAP31Q2M1Z3 1444 aa24.27■■□□□ 1.48
SBDSP1-201ENST00000415772 LRRC7Q96NW7 1537 aa24.26■■□□□ 1.47
SBDSP1-201ENST00000415772 CHIC2Q9UKJ5 165 aa24.26■■□□□ 1.47
SBDSP1-201ENST00000415772 ANKRD30AQ9BXX3 1397 aa24.26■■□□□ 1.47
SBDSP1-201ENST00000415772 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
SBDSP1-201ENST00000415772 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
SBDSP1-201ENST00000415772 SLIT1O75093 1534 aa24.22■■□□□ 1.47
SBDSP1-201ENST00000415772 LTKP29376 864 aa24.21■■□□□ 1.47
SBDSP1-201ENST00000415772 PIK3C2BO00750 1634 aa24.21■■□□□ 1.47
SBDSP1-201ENST00000415772 ARHGAP23Q9P227 1491 aa24.2■■□□□ 1.47
SBDSP1-201ENST00000415772 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
SBDSP1-201ENST00000415772 EFCAB6Q5THR3 1501 aa24.16■■□□□ 1.46
SBDSP1-201ENST00000415772 BCANQ96GW7 911 aa24.16■■□□□ 1.46
SBDSP1-201ENST00000415772 ALKQ9UM73 1620 aa24.16■■□□□ 1.46
SBDSP1-201ENST00000415772 FAM50AQ14320 339 aaKnown RBP24.15■■□□□ 1.46
SBDSP1-201ENST00000415772 LMTK2Q8IWU2 1503 aa24.12■■□□□ 1.45
SBDSP1-201ENST00000415772 IDI1Q13907 227 aa24.12■■□□□ 1.45
SBDSP1-201ENST00000415772 KDM5AP29375 1690 aaKnown RBP24.11■■□□□ 1.45
SBDSP1-201ENST00000415772 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
SBDSP1-201ENST00000415772 PROSER2Q86WR7 435 aaPredicted RBP24.07■■□□□ 1.44
SBDSP1-201ENST00000415772 SLC52A1Q9NWF4 448 aa24.07■■□□□ 1.44
SBDSP1-201ENST00000415772 ADGRB3O60242 1522 aa24.06■■□□□ 1.44
SBDSP1-201ENST00000415772 KCNA6P17658 529 aa24.05■■□□□ 1.44
SBDSP1-201ENST00000415772 ADGRL2O95490 1459 aa24.05■■□□□ 1.44
SBDSP1-201ENST00000415772 TMEM94Q12767 1356 aa24.04■■□□□ 1.44
SBDSP1-201ENST00000415772 PPP1R15AO75807 674 aaPredicted RBP24.04■■□□□ 1.44
SBDSP1-201ENST00000415772 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
SBDSP1-201ENST00000415772 HDGFP51858 240 aaKnown RBP24.03■■□□□ 1.44
SBDSP1-201ENST00000415772 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
SBDSP1-201ENST00000415772 NOS1P29475 1434 aa24.02■■□□□ 1.44
SBDSP1-201ENST00000415772 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
SBDSP1-201ENST00000415772 CHGAP10645 457 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms