RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
SBDSP1-201ENST00000415772 ABCC9O60706 1549 aa35.17■■■■□ 3.22
SBDSP1-201ENST00000415772 CCDC180Q9P1Z9 1646 aa35.01■■■■□ 3.19
SBDSP1-201ENST00000415772 RB1CC1Q8TDY2 1594 aa33.44■■■□□ 2.94
SBDSP1-201ENST00000415772 NACADO15069 1562 aa33.13■■■□□ 2.89
SBDSP1-201ENST00000415772 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
SBDSP1-201ENST00000415772 DNAJC5BQ9UF47 199 aa32.96■■■□□ 2.87
SBDSP1-201ENST00000415772 PABPN1Q86U42 306 aaKnown RBP eCLIP32.71■■■□□ 2.83
SBDSP1-201ENST00000415772 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
SBDSP1-201ENST00000415772 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
SBDSP1-201ENST00000415772 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.76
SBDSP1-201ENST00000415772 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
SBDSP1-201ENST00000415772 DCAF1Q9Y4B6 1507 aa32.1■■■□□ 2.73
SBDSP1-201ENST00000415772 SHROOM4Q9ULL8 1493 aa31.97■■■□□ 2.71
SBDSP1-201ENST00000415772 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
SBDSP1-201ENST00000415772 CC2D2AQ9P2K1 1620 aa31.72■■■□□ 2.67
SBDSP1-201ENST00000415772 CECR2Q9BXF3 1484 aa31.69■■■□□ 2.66
SBDSP1-201ENST00000415772 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
SBDSP1-201ENST00000415772 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
SBDSP1-201ENST00000415772 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
SBDSP1-201ENST00000415772 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
SBDSP1-201ENST00000415772 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
SBDSP1-201ENST00000415772 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
SBDSP1-201ENST00000415772 SMARCA4P51532 1647 aa30.4■■■□□ 2.46
SBDSP1-201ENST00000415772 CUX2O14529 1486 aa30.36■■■□□ 2.45
SBDSP1-201ENST00000415772 HMGXB3Q12766 1538 aa30.33■■■□□ 2.45
SBDSP1-201ENST00000415772 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
SBDSP1-201ENST00000415772 BAZ1BQ9UIG0 1483 aaKnown RBP30.22■■■□□ 2.43
SBDSP1-201ENST00000415772 NESP48681 1621 aa30.11■■■□□ 2.41
SBDSP1-201ENST00000415772 PEG3Q9GZU2 1588 aa30.04■■■□□ 2.4
SBDSP1-201ENST00000415772 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
SBDSP1-201ENST00000415772 LAMC3Q9Y6N6 1575 aa29.94■■■□□ 2.38
SBDSP1-201ENST00000415772 THOC2Q8NI27 1593 aaKnown RBP29.83■■■□□ 2.37
SBDSP1-201ENST00000415772 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
SBDSP1-201ENST00000415772 KIF21AQ7Z4S6 1674 aa29.76■■■□□ 2.35
SBDSP1-201ENST00000415772 CADPSQ9ULU8 1353 aa29.64■■■□□ 2.34
SBDSP1-201ENST00000415772 WIZO95785 1651 aa29.63■■■□□ 2.33
SBDSP1-201ENST00000415772 MRC2Q9UBG0 1479 aa29.53■■■□□ 2.32
SBDSP1-201ENST00000415772 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
SBDSP1-201ENST00000415772 WDR62O43379 1518 aa29.4■■■□□ 2.3
SBDSP1-201ENST00000415772 FANCD2Q9BXW9 1451 aa29.34■■■□□ 2.29
SBDSP1-201ENST00000415772 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
SBDSP1-201ENST00000415772 TOP2AP11388 1531 aaKnown RBP29.26■■■□□ 2.27
SBDSP1-201ENST00000415772 CFTRP13569 1480 aa29.24■■■□□ 2.27
SBDSP1-201ENST00000415772 TRIM41Q8WV44 630 aa29.22■■■□□ 2.27
SBDSP1-201ENST00000415772 URB2Q14146 1524 aaKnown RBP29.04■■■□□ 2.24
SBDSP1-201ENST00000415772 OSCARQ8IYS5 282 aa29■■■□□ 2.23
SBDSP1-201ENST00000415772 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
SBDSP1-201ENST00000415772 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
SBDSP1-201ENST00000415772 IFT140Q96RY7 1462 aa28.8■■■□□ 2.2
SBDSP1-201ENST00000415772 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
SBDSP1-201ENST00000415772 ABCC8Q09428 1581 aa28.73■■■□□ 2.19
SBDSP1-201ENST00000415772 ZNF608Q9ULD9 1512 aaPredicted RBP28.7■■■□□ 2.19
SBDSP1-201ENST00000415772 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
SBDSP1-201ENST00000415772 EIF4G3O43432 1585 aaKnown RBP28.6■■■□□ 2.17
SBDSP1-201ENST00000415772 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
SBDSP1-201ENST00000415772 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
SBDSP1-201ENST00000415772 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
SBDSP1-201ENST00000415772 ARHGEF11O15085 1522 aa28.48■■■□□ 2.15
SBDSP1-201ENST00000415772 FBLN2P98095 1184 aa28.47■■■□□ 2.15
SBDSP1-201ENST00000415772 AQRO60306 1485 aaKnown RBP eCLIP28.46■■■□□ 2.15
SBDSP1-201ENST00000415772 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
SBDSP1-201ENST00000415772 POLA1P09884 1462 aaPredicted RBP28.43■■■□□ 2.14
SBDSP1-201ENST00000415772 CHD1O14646 1710 aa28.41■■■□□ 2.14
SBDSP1-201ENST00000415772 SOGA1O94964 1423 aa28.35■■■□□ 2.13
SBDSP1-201ENST00000415772 CYB5RLQ6IPT4 315 aa28.34■■■□□ 2.13
SBDSP1-201ENST00000415772 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
SBDSP1-201ENST00000415772 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
SBDSP1-201ENST00000415772 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
SBDSP1-201ENST00000415772 WDR97A6NE52 1622 aa28.22■■■□□ 2.11
SBDSP1-201ENST00000415772 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
SBDSP1-201ENST00000415772 CHMP7Q8WUX9 453 aaPredicted RBP28.19■■■□□ 2.1
SBDSP1-201ENST00000415772 TRHP20396 242 aaPredicted RBP28.18■■■□□ 2.1
SBDSP1-201ENST00000415772 CUX1P39880 1505 aa28.16■■■□□ 2.1
SBDSP1-201ENST00000415772 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
SBDSP1-201ENST00000415772 GRIN2BQ13224 1484 aa28.12■■■□□ 2.09
SBDSP1-201ENST00000415772 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
SBDSP1-201ENST00000415772 SYNJ1O43426 1573 aa28.11■■■□□ 2.09
SBDSP1-201ENST00000415772 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
SBDSP1-201ENST00000415772 CLASP1Q7Z460 1538 aa28.02■■■□□ 2.08
SBDSP1-201ENST00000415772 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
SBDSP1-201ENST00000415772 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
SBDSP1-201ENST00000415772 PBRM1Q86U86 1689 aa28■■■□□ 2.07
SBDSP1-201ENST00000415772 ABCA10Q8WWZ4 1543 aa27.91■■■□□ 2.06
SBDSP1-201ENST00000415772 ABCA5Q8WWZ7 1642 aa27.86■■■□□ 2.05
SBDSP1-201ENST00000415772 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
SBDSP1-201ENST00000415772 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
SBDSP1-201ENST00000415772 TOP2BQ02880 1626 aa27.7■■■□□ 2.03
SBDSP1-201ENST00000415772 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.03
SBDSP1-201ENST00000415772 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
SBDSP1-201ENST00000415772 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
SBDSP1-201ENST00000415772 CEP170Q5SW79 1584 aa27.61■■■□□ 2.01
SBDSP1-201ENST00000415772 NUP160Q12769 1436 aa27.58■■■□□ 2.01
SBDSP1-201ENST00000415772 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
SBDSP1-201ENST00000415772 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
SBDSP1-201ENST00000415772 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■□□□ 1.99
SBDSP1-201ENST00000415772 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
SBDSP1-201ENST00000415772 PRG4Q92954 1404 aaPredicted RBP27.42■■□□□ 1.98
SBDSP1-201ENST00000415772 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
SBDSP1-201ENST00000415772 NPM1P06748 294 aaKnown RBP eCLIP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms