RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NCOA2Q15596 1464 aa26.63■■□□□ 1.85
MRPL55-220ENST00000411464 CCDC141Q6ZP82 1450 aa26.63■■□□□ 1.85
MRPL55-220ENST00000411464 A2ML1A8K2U0 1454 aa26.62■■□□□ 1.85
MRPL55-220ENST00000411464 ZNF142P52746 1687 aaPredicted RBP26.62■■□□□ 1.85
MRPL55-220ENST00000411464 TNRQ92752 1358 aa26.61■■□□□ 1.85
MRPL55-220ENST00000411464 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
MRPL55-220ENST00000411464 SOCS7O14512 581 aa26.58■■□□□ 1.85
MRPL55-220ENST00000411464 PZPP20742 1482 aa26.55■■□□□ 1.84
MRPL55-220ENST00000411464 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
MRPL55-220ENST00000411464 THEMISQ8N1K5 641 aaPredicted RBP26.54■■□□□ 1.84
MRPL55-220ENST00000411464 KDM5DQ9BY66 1539 aa26.54■■□□□ 1.84
MRPL55-220ENST00000411464 DNMT1P26358 1616 aaKnown RBP26.54■■□□□ 1.84
MRPL55-220ENST00000411464 SPATA31D1Q6ZQQ2 1576 aa26.52■■□□□ 1.84
MRPL55-220ENST00000411464 FAM135AQ9P2D6 1515 aa26.51■■□□□ 1.83
MRPL55-220ENST00000411464 MIA2Q96PC5 1412 aa26.51■■□□□ 1.83
MRPL55-220ENST00000411464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.83
MRPL55-220ENST00000411464 SCAF1Q9H7N4 1312 aaKnown RBP26.46■■□□□ 1.83
MRPL55-220ENST00000411464 TOM1O60784 492 aa26.46■■□□□ 1.83
MRPL55-220ENST00000411464 ARHGEF5Q12774 1597 aa26.46■■□□□ 1.83
MRPL55-220ENST00000411464 LRRC9Q6ZRR7 1453 aa26.45■■□□□ 1.82
MRPL55-220ENST00000411464 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
MRPL55-220ENST00000411464 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.82
MRPL55-220ENST00000411464 NLRP1Q9C000 1473 aa26.44■■□□□ 1.82
MRPL55-220ENST00000411464 PIP4K2BP78356 416 aa26.43■■□□□ 1.82
MRPL55-220ENST00000411464 SHANK2Q9UPX8 1470 aa26.42■■□□□ 1.82
MRPL55-220ENST00000411464 KANK4Q5T7N3 995 aaPredicted RBP26.41■■□□□ 1.82
MRPL55-220ENST00000411464 CPS1P31327 1500 aa26.4■■□□□ 1.82
MRPL55-220ENST00000411464 UGGT1Q9NYU2 1555 aa26.4■■□□□ 1.82
MRPL55-220ENST00000411464 NEURL4Q96JN8 1562 aa26.38■■□□□ 1.81
MRPL55-220ENST00000411464 NPHP4O75161 1426 aaPredicted RBP26.38■■□□□ 1.81
MRPL55-220ENST00000411464 HSPA1LP34931 641 aa26.37■■□□□ 1.81
MRPL55-220ENST00000411464 MED14O60244 1454 aa26.34■■□□□ 1.81
MRPL55-220ENST00000411464 MYOM3Q5VTT5 1437 aa26.33■■□□□ 1.81
MRPL55-220ENST00000411464 POLR1AO95602 1720 aaPredicted RBP26.33■■□□□ 1.81
MRPL55-220ENST00000411464 ABCC3O15438 1527 aa26.33■■□□□ 1.81
MRPL55-220ENST00000411464 MAST1Q9Y2H9 1570 aa26.33■■□□□ 1.8
MRPL55-220ENST00000411464 MAP3K1Q13233 1512 aa26.31■■□□□ 1.8
MRPL55-220ENST00000411464 RNF17Q9BXT8 1623 aaKnown RBP26.29■■□□□ 1.8
MRPL55-220ENST00000411464 DEPDC5O75140 1603 aa26.28■■□□□ 1.8
MRPL55-220ENST00000411464 ERVK-7P63135 1459 aa26.28■■□□□ 1.8
MRPL55-220ENST00000411464 VWDEQ8N2E2 1590 aa26.28■■□□□ 1.8
MRPL55-220ENST00000411464 APLP2Q06481 763 aa26.27■■□□□ 1.8
MRPL55-220ENST00000411464 RRP7BPQ9NSQ0 103 aa26.26■■□□□ 1.79
MRPL55-220ENST00000411464 EIF2AK4Q9P2K8 1649 aaKnown RBP26.25■■□□□ 1.79
MRPL55-220ENST00000411464 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
MRPL55-220ENST00000411464 ZC3H13Q5T200 1668 aaKnown RBP26.24■■□□□ 1.79
MRPL55-220ENST00000411464 KIF15Q9NS87 1388 aa26.23■■□□□ 1.79
MRPL55-220ENST00000411464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.22■■□□□ 1.79
MRPL55-220ENST00000411464 TXNDC2Q86VQ3 553 aa26.21■■□□□ 1.79
MRPL55-220ENST00000411464 IQGAP1P46940 1657 aa26.19■■□□□ 1.78
MRPL55-220ENST00000411464 MROH1Q8NDA8 1641 aa26.19■■□□□ 1.78
MRPL55-220ENST00000411464 ABCC5O15440 1437 aa26.18■■□□□ 1.78
MRPL55-220ENST00000411464 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
MRPL55-220ENST00000411464 ARHGAP31Q2M1Z3 1444 aa26.17■■□□□ 1.78
MRPL55-220ENST00000411464 LTKP29376 864 aa26.17■■□□□ 1.78
MRPL55-220ENST00000411464 SCAF11Q99590 1463 aaKnown RBP26.17■■□□□ 1.78
MRPL55-220ENST00000411464 ERBINQ96RT1 1412 aa26.16■■□□□ 1.78
MRPL55-220ENST00000411464 LRRC7Q96NW7 1537 aa26.16■■□□□ 1.78
MRPL55-220ENST00000411464 KANK1Q14678 1352 aa26.16■■□□□ 1.78
MRPL55-220ENST00000411464 STAG3Q9UJ98 1225 aa26.15■■□□□ 1.78
MRPL55-220ENST00000411464 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
MRPL55-220ENST00000411464 PHF23Q9BUL5 403 aaPredicted RBP26.13■■□□□ 1.77
MRPL55-220ENST00000411464 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
MRPL55-220ENST00000411464 CHIC2Q9UKJ5 165 aa26.11■■□□□ 1.77
MRPL55-220ENST00000411464 DAPK1P53355 1430 aa26.11■■□□□ 1.77
MRPL55-220ENST00000411464 CEP152O94986 1710 aa26.11■■□□□ 1.77
MRPL55-220ENST00000411464 ARHGAP23Q9P227 1491 aa26.1■■□□□ 1.77
MRPL55-220ENST00000411464 ALKQ9UM73 1620 aa26.1■■□□□ 1.77
MRPL55-220ENST00000411464 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
MRPL55-220ENST00000411464 SLIT1O75093 1534 aa26.09■■□□□ 1.77
MRPL55-220ENST00000411464 ANKRD30AQ9BXX3 1397 aa26.08■■□□□ 1.77
MRPL55-220ENST00000411464 UBR1Q8IWV7 1749 aa26.08■■□□□ 1.77
MRPL55-220ENST00000411464 PTPN23Q9H3S7 1636 aa26.08■■□□□ 1.77
MRPL55-220ENST00000411464 TMEM2Q9UHN6 1383 aa26.07■■□□□ 1.76
MRPL55-220ENST00000411464 FGD6Q6ZV73 1430 aa26.06■■□□□ 1.76
MRPL55-220ENST00000411464 IDI1Q13907 227 aa26.05■■□□□ 1.76
MRPL55-220ENST00000411464 SYNMO15061 1565 aa26.04■■□□□ 1.76
MRPL55-220ENST00000411464 STRCP1A6NGW2 1772 aa26.04■■□□□ 1.76
MRPL55-220ENST00000411464 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
MRPL55-220ENST00000411464 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
MRPL55-220ENST00000411464 KCNA6P17658 529 aa25.97■■□□□ 1.75
MRPL55-220ENST00000411464 LMTK2Q8IWU2 1503 aa25.97■■□□□ 1.75
MRPL55-220ENST00000411464 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
MRPL55-220ENST00000411464 SLC26A8Q96RN1 970 aa25.96■■□□□ 1.75
MRPL55-220ENST00000411464 SLC52A1Q9NWF4 448 aa25.96■■□□□ 1.75
MRPL55-220ENST00000411464 EFCAB6Q5THR3 1501 aa25.96■■□□□ 1.75
MRPL55-220ENST00000411464 FAM50AQ14320 339 aaKnown RBP25.95■■□□□ 1.74
MRPL55-220ENST00000411464 PROSER2Q86WR7 435 aaPredicted RBP25.94■■□□□ 1.74
MRPL55-220ENST00000411464 BCANQ96GW7 911 aa25.94■■□□□ 1.74
MRPL55-220ENST00000411464 TMEM94Q12767 1356 aa25.94■■□□□ 1.74
MRPL55-220ENST00000411464 NOS1P29475 1434 aa25.92■■□□□ 1.74
MRPL55-220ENST00000411464 FAM135BQ49AJ0 1406 aa25.9■■□□□ 1.74
MRPL55-220ENST00000411464 RBM33Q96EV2 1170 aaKnown RBP25.88■■□□□ 1.73
MRPL55-220ENST00000411464 ADGRL2O95490 1459 aa25.87■■□□□ 1.73
MRPL55-220ENST00000411464 HDGFP51858 240 aaKnown RBP25.87■■□□□ 1.73
MRPL55-220ENST00000411464 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
MRPL55-220ENST00000411464 KDM5AP29375 1690 aaKnown RBP25.86■■□□□ 1.73
MRPL55-220ENST00000411464 TET3O43151 1660 aa25.84■■□□□ 1.73
MRPL55-220ENST00000411464 PPP1R15AO75807 674 aaPredicted RBP25.83■■□□□ 1.73
MRPL55-220ENST00000411464 ADGRB3O60242 1522 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms