RNA–Protein interactions for RNA: ENST00000397154.7

NGDN-201, Transcript of neuroguidin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NGDN, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-201ENST00000397154 CAMSAP2Q08AD1 1489 aa13.81□□□□□ -0.2
NGDN-201ENST00000397154 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
NGDN-201ENST00000397154 TNRQ92752 1358 aa13.8□□□□□ -0.2
NGDN-201ENST00000397154 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
NGDN-201ENST00000397154 ILDR2Q71H61 639 aa13.8□□□□□ -0.2
NGDN-201ENST00000397154 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
NGDN-201ENST00000397154 PZPP20742 1482 aa13.8□□□□□ -0.2
NGDN-201ENST00000397154 KIF3BO15066 747 aa13.78□□□□□ -0.2
NGDN-201ENST00000397154 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
NGDN-201ENST00000397154 POLR1AO95602 1720 aaPredicted RBP13.77□□□□□ -0.21
NGDN-201ENST00000397154 CPS1P31327 1500 aa13.76□□□□□ -0.21
NGDN-201ENST00000397154 NLRP1Q9C000 1473 aa13.75□□□□□ -0.21
NGDN-201ENST00000397154 WASHC2CQ9Y4E1 1318 aa13.75□□□□□ -0.21
NGDN-201ENST00000397154 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
NGDN-201ENST00000397154 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
NGDN-201ENST00000397154 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
NGDN-201ENST00000397154 MIA2Q96PC5 1412 aa13.73□□□□□ -0.21
NGDN-201ENST00000397154 FBXO31Q5XUX0 539 aaPredicted RBP13.72□□□□□ -0.21
NGDN-201ENST00000397154 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
NGDN-201ENST00000397154 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
NGDN-201ENST00000397154 THEMISQ8N1K5 641 aaPredicted RBP13.72□□□□□ -0.21
NGDN-201ENST00000397154 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
NGDN-201ENST00000397154 ZC3H13Q5T200 1668 aaKnown RBP13.71□□□□□ -0.21
NGDN-201ENST00000397154 RNF17Q9BXT8 1623 aaKnown RBP13.71□□□□□ -0.21
NGDN-201ENST00000397154 UGGT1Q9NYU2 1555 aa13.71□□□□□ -0.22
NGDN-201ENST00000397154 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
NGDN-201ENST00000397154 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
NGDN-201ENST00000397154 MED14O60244 1454 aa13.7□□□□□ -0.22
NGDN-201ENST00000397154 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
NGDN-201ENST00000397154 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
NGDN-201ENST00000397154 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
NGDN-201ENST00000397154 TOM1O60784 492 aa13.69□□□□□ -0.22
NGDN-201ENST00000397154 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.69□□□□□ -0.22
NGDN-201ENST00000397154 ABCC3O15438 1527 aa13.69□□□□□ -0.22
NGDN-201ENST00000397154 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
NGDN-201ENST00000397154 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
NGDN-201ENST00000397154 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
NGDN-201ENST00000397154 ERVK-7P63135 1459 aa13.66□□□□□ -0.22
NGDN-201ENST00000397154 IQGAP1P46940 1657 aa13.65□□□□□ -0.22
NGDN-201ENST00000397154 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
NGDN-201ENST00000397154 HSPA1LP34931 641 aa13.64□□□□□ -0.23
NGDN-201ENST00000397154 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
NGDN-201ENST00000397154 DUOX2Q9NRD8 1548 aa13.64□□□□□ -0.23
NGDN-201ENST00000397154 SYNMO15061 1565 aa13.63□□□□□ -0.23
NGDN-201ENST00000397154 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
NGDN-201ENST00000397154 MROH1Q8NDA8 1641 aa13.63□□□□□ -0.23
NGDN-201ENST00000397154 CEP152O94986 1710 aa13.6□□□□□ -0.23
NGDN-201ENST00000397154 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
NGDN-201ENST00000397154 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
NGDN-201ENST00000397154 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
NGDN-201ENST00000397154 SCAF11Q99590 1463 aaKnown RBP13.59□□□□□ -0.23
NGDN-201ENST00000397154 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
NGDN-201ENST00000397154 ERBINQ96RT1 1412 aa13.59□□□□□ -0.23
NGDN-201ENST00000397154 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
NGDN-201ENST00000397154 KIF15Q9NS87 1388 aa13.58□□□□□ -0.24
NGDN-201ENST00000397154 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
NGDN-201ENST00000397154 SLIT1O75093 1534 aa13.57□□□□□ -0.24
NGDN-201ENST00000397154 ARHGAP23Q9P227 1491 aa13.57□□□□□ -0.24
NGDN-201ENST00000397154 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
NGDN-201ENST00000397154 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
NGDN-201ENST00000397154 KANK1Q14678 1352 aa13.55□□□□□ -0.24
NGDN-201ENST00000397154 ABCC5O15440 1437 aa13.55□□□□□ -0.24
NGDN-201ENST00000397154 PHF23Q9BUL5 403 aaPredicted RBP13.54□□□□□ -0.24
NGDN-201ENST00000397154 PTPN23Q9H3S7 1636 aa13.54□□□□□ -0.24
NGDN-201ENST00000397154 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
NGDN-201ENST00000397154 TXNDC2Q86VQ3 553 aa13.53□□□□□ -0.24
NGDN-201ENST00000397154 APLP2Q06481 763 aa13.52□□□□□ -0.24
NGDN-201ENST00000397154 DAPK1P53355 1430 aa13.52□□□□□ -0.25
NGDN-201ENST00000397154 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
NGDN-201ENST00000397154 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
NGDN-201ENST00000397154 LMTK2Q8IWU2 1503 aa13.51□□□□□ -0.25
NGDN-201ENST00000397154 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
NGDN-201ENST00000397154 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
NGDN-201ENST00000397154 TMEM2Q9UHN6 1383 aa13.5□□□□□ -0.25
NGDN-201ENST00000397154 LTKP29376 864 aa13.5□□□□□ -0.25
NGDN-201ENST00000397154 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
NGDN-201ENST00000397154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.252e-8■■■□□ 15.7
NGDN-201ENST00000397154 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
NGDN-201ENST00000397154 EFCAB6Q5THR3 1501 aa13.49□□□□□ -0.25
NGDN-201ENST00000397154 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
NGDN-201ENST00000397154 CFAP65Q6ZU64 1925 aaKnown RBP13.47□□□□□ -0.25
NGDN-201ENST00000397154 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
NGDN-201ENST00000397154 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
NGDN-201ENST00000397154 NOS1P29475 1434 aa13.44□□□□□ -0.26
NGDN-201ENST00000397154 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
NGDN-201ENST00000397154 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
NGDN-201ENST00000397154 ADGRL2O95490 1459 aa13.44□□□□□ -0.26
NGDN-201ENST00000397154 KCNA6P17658 529 aa13.43□□□□□ -0.26
NGDN-201ENST00000397154 IDI1Q13907 227 aa13.43□□□□□ -0.26
NGDN-201ENST00000397154 NKTRP30414 1462 aaKnown RBP13.43□□□□□ -0.26
NGDN-201ENST00000397154 TMEM94Q12767 1356 aa13.42□□□□□ -0.26
NGDN-201ENST00000397154 NWD1Q149M9 1564 aa13.42□□□□□ -0.26
NGDN-201ENST00000397154 RPRD2Q5VT52 1461 aaKnown RBP13.42□□□□□ -0.26
NGDN-201ENST00000397154 TET3O43151 1660 aa13.42□□□□□ -0.26
NGDN-201ENST00000397154 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
NGDN-201ENST00000397154 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
NGDN-201ENST00000397154 PROSER2Q86WR7 435 aaPredicted RBP13.4□□□□□ -0.26
NGDN-201ENST00000397154 SLC26A8Q96RN1 970 aa13.38□□□□□ -0.27
NGDN-201ENST00000397154 ANKRD50Q9ULJ7 1429 aa13.38□□□□□ -0.27
NGDN-201ENST00000397154 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms