RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 A2ML1A8K2U0 1454 aa25.89■■□□□ 1.73
CLTA-203ENST00000396603 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
CLTA-203ENST00000396603 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
CLTA-203ENST00000396603 PZPP20742 1482 aa25.87■■□□□ 1.73
CLTA-203ENST00000396603 KIF3BO15066 747 aa25.86■■□□□ 1.73
CLTA-203ENST00000396603 MIA2Q96PC5 1412 aa25.85■■□□□ 1.73
CLTA-203ENST00000396603 MAST1Q9Y2H9 1570 aa25.85■■□□□ 1.73
CLTA-203ENST00000396603 NCKAP5LQ9HCH0 1330 aa25.83■■□□□ 1.73
CLTA-203ENST00000396603 DNMT1P26358 1616 aaKnown RBP25.82■■□□□ 1.72
CLTA-203ENST00000396603 TNRQ92752 1358 aa25.82■■□□□ 1.72
CLTA-203ENST00000396603 WASHC2CQ9Y4E1 1318 aa25.81■■□□□ 1.72
CLTA-203ENST00000396603 RNF17Q9BXT8 1623 aaKnown RBP25.78■■□□□ 1.72
CLTA-203ENST00000396603 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
CLTA-203ENST00000396603 NLRP1Q9C000 1473 aa25.78■■□□□ 1.72
CLTA-203ENST00000396603 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
CLTA-203ENST00000396603 ZC3H13Q5T200 1668 aaKnown RBP25.75■■□□□ 1.71
CLTA-203ENST00000396603 ZNF335Q9H4Z2 1342 aaPredicted RBP25.74■■□□□ 1.71
CLTA-203ENST00000396603 LOC105371045A0A1W2PR82 267 aa25.74■■□□□ 1.71
CLTA-203ENST00000396603 FBXO31Q5XUX0 539 aaPredicted RBP25.72■■□□□ 1.71
CLTA-203ENST00000396603 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
CLTA-203ENST00000396603 THEMISQ8N1K5 641 aaPredicted RBP25.7■■□□□ 1.7
CLTA-203ENST00000396603 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
CLTA-203ENST00000396603 ABCC3O15438 1527 aa25.69■■□□□ 1.7
CLTA-203ENST00000396603 SHANK2Q9UPX8 1470 aa25.68■■□□□ 1.7
CLTA-203ENST00000396603 NEURL4Q96JN8 1562 aa25.68■■□□□ 1.7
CLTA-203ENST00000396603 DUOX2Q9NRD8 1548 aa25.68■■□□□ 1.7
CLTA-203ENST00000396603 SPATA31D1Q6ZQQ2 1576 aa25.67■■□□□ 1.7
CLTA-203ENST00000396603 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
CLTA-203ENST00000396603 CPS1P31327 1500 aa25.66■■□□□ 1.7
CLTA-203ENST00000396603 MED14O60244 1454 aa25.66■■□□□ 1.7
CLTA-203ENST00000396603 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
CLTA-203ENST00000396603 DEPDC5O75140 1603 aa25.65■■□□□ 1.7
CLTA-203ENST00000396603 MROH1Q8NDA8 1641 aa25.63■■□□□ 1.69
CLTA-203ENST00000396603 ERBINQ96RT1 1412 aa25.62■■□□□ 1.69
CLTA-203ENST00000396603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.69
CLTA-203ENST00000396603 DISP3Q9P2K9 1392 aa25.61■■□□□ 1.69
CLTA-203ENST00000396603 APLP2Q06481 763 aa25.61■■□□□ 1.69
CLTA-203ENST00000396603 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
CLTA-203ENST00000396603 UBAP1LF5GYI3 381 aa25.6■■□□□ 1.69
CLTA-203ENST00000396603 PRDM15P57071 1507 aaPredicted RBP25.58■■□□□ 1.69
CLTA-203ENST00000396603 ARHGAP31Q2M1Z3 1444 aa25.58■■□□□ 1.69
CLTA-203ENST00000396603 CROCC2H7BZ55 1655 aa25.58■■□□□ 1.68
CLTA-203ENST00000396603 KIF15Q9NS87 1388 aa25.57■■□□□ 1.68
CLTA-203ENST00000396603 ABCC5O15440 1437 aa25.57■■□□□ 1.68
CLTA-203ENST00000396603 NPHP4O75161 1426 aaPredicted RBP25.57■■□□□ 1.68
CLTA-203ENST00000396603 PTPN23Q9H3S7 1636 aa25.56■■□□□ 1.68
CLTA-203ENST00000396603 VWDEQ8N2E2 1590 aa25.54■■□□□ 1.68
CLTA-203ENST00000396603 DAPK1P53355 1430 aa25.53■■□□□ 1.68
CLTA-203ENST00000396603 FGD6Q6ZV73 1430 aa25.53■■□□□ 1.68
CLTA-203ENST00000396603 IQGAP1P46940 1657 aa25.51■■□□□ 1.67
CLTA-203ENST00000396603 CEP152O94986 1710 aa25.5■■□□□ 1.67
CLTA-203ENST00000396603 TOM1O60784 492 aa25.49■■□□□ 1.67
CLTA-203ENST00000396603 UBR1Q8IWV7 1749 aa25.46■■□□□ 1.67
CLTA-203ENST00000396603 KANK1Q14678 1352 aa25.46■■□□□ 1.67
CLTA-203ENST00000396603 ANKRD30AQ9BXX3 1397 aa25.46■■□□□ 1.67
CLTA-203ENST00000396603 LMTK2Q8IWU2 1503 aa25.46■■□□□ 1.67
CLTA-203ENST00000396603 RRP7BPQ9NSQ0 103 aa25.45■■□□□ 1.66
CLTA-203ENST00000396603 SLIT1O75093 1534 aa25.45■■□□□ 1.66
CLTA-203ENST00000396603 ARHGAP23Q9P227 1491 aa25.45■■□□□ 1.66
CLTA-203ENST00000396603 SCAF11Q99590 1463 aaKnown RBP25.43■■□□□ 1.66
CLTA-203ENST00000396603 SYNMO15061 1565 aa25.43■■□□□ 1.66
CLTA-203ENST00000396603 ILDR2Q71H61 639 aa25.42■■□□□ 1.66
CLTA-203ENST00000396603 ADGRL2O95490 1459 aa25.4■■□□□ 1.66
CLTA-203ENST00000396603 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
CLTA-203ENST00000396603 SOCS7O14512 581 aa25.4■■□□□ 1.66
CLTA-203ENST00000396603 LRRC7Q96NW7 1537 aa25.36■■□□□ 1.65
CLTA-203ENST00000396603 EID1Q9Y6B2 187 aa25.35■■□□□ 1.65
CLTA-203ENST00000396603 TMEM2Q9UHN6 1383 aa25.33■■□□□ 1.65
CLTA-203ENST00000396603 TXNDC2Q86VQ3 553 aa25.33■■□□□ 1.65
CLTA-203ENST00000396603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.33■■□□□ 1.654e-7■■■□□ 15.1
CLTA-203ENST00000396603 LTKP29376 864 aa25.32■■□□□ 1.64
CLTA-203ENST00000396603 PIP4K2BP78356 416 aa25.32■■□□□ 1.64
CLTA-203ENST00000396603 PIK3C2BO00750 1634 aa25.32■■□□□ 1.64
CLTA-203ENST00000396603 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
CLTA-203ENST00000396603 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
CLTA-203ENST00000396603 ALKQ9UM73 1620 aa25.31■■□□□ 1.64
CLTA-203ENST00000396603 HSPA1LP34931 641 aa25.31■■□□□ 1.64
CLTA-203ENST00000396603 STRCP1A6NGW2 1772 aa25.31■■□□□ 1.64
CLTA-203ENST00000396603 NOS1P29475 1434 aa25.3■■□□□ 1.64
CLTA-203ENST00000396603 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
CLTA-203ENST00000396603 CHIC2Q9UKJ5 165 aa25.29■■□□□ 1.64
CLTA-203ENST00000396603 CFAP65Q6ZU64 1925 aaKnown RBP25.29■■□□□ 1.64
CLTA-203ENST00000396603 SLC52A1Q9NWF4 448 aa25.27■■□□□ 1.64
CLTA-203ENST00000396603 STAG3Q9UJ98 1225 aa25.26■■□□□ 1.63
CLTA-203ENST00000396603 ANKRD50Q9ULJ7 1429 aa25.26■■□□□ 1.63
CLTA-203ENST00000396603 IDI1Q13907 227 aa25.25■■□□□ 1.63
CLTA-203ENST00000396603 ADGRB3O60242 1522 aa25.23■■□□□ 1.63
CLTA-203ENST00000396603 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
CLTA-203ENST00000396603 FAM50AQ14320 339 aaKnown RBP25.21■■□□□ 1.63
CLTA-203ENST00000396603 TET3O43151 1660 aa25.18■■□□□ 1.62
CLTA-203ENST00000396603 ROCK1Q13464 1354 aa25.17■■□□□ 1.62
CLTA-203ENST00000396603 UNC13BO14795 1591 aa25.15■■□□□ 1.62
CLTA-203ENST00000396603 KCNA6P17658 529 aa25.15■■□□□ 1.62
CLTA-203ENST00000396603 NKTRP30414 1462 aaKnown RBP25.13■■□□□ 1.61
CLTA-203ENST00000396603 XIRP1Q702N8 1843 aaKnown RBP25.12■■□□□ 1.61
CLTA-203ENST00000396603 GCC2Q8IWJ2 1684 aa25.11■■□□□ 1.61
CLTA-203ENST00000396603 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
CLTA-203ENST00000396603 HDGFP51858 240 aaKnown RBP25.11■■□□□ 1.61
CLTA-203ENST00000396603 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
CLTA-203ENST00000396603 ZFYVE9O95405 1425 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms