RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CCDC141Q6ZP82 1450 aa27.97■■■□□ 2.07
EXOSC3-202ENST00000396521 WASHC2CQ9Y4E1 1318 aa27.94■■■□□ 2.06
EXOSC3-202ENST00000396521 TSPY4P0CV99 314 aa27.94■■■□□ 2.06
EXOSC3-202ENST00000396521 TSPY10P0CW01 314 aa27.94■■■□□ 2.06
EXOSC3-202ENST00000396521 TNRQ92752 1358 aa27.94■■■□□ 2.06
EXOSC3-202ENST00000396521 NCOA2Q15596 1464 aa27.92■■■□□ 2.06
EXOSC3-202ENST00000396521 THEMISQ8N1K5 641 aaPredicted RBP27.91■■■□□ 2.06
EXOSC3-202ENST00000396521 PZPP20742 1482 aa27.9■■■□□ 2.06
EXOSC3-202ENST00000396521 SPATA31D1Q6ZQQ2 1576 aa27.9■■■□□ 2.06
EXOSC3-202ENST00000396521 KDM5DQ9BY66 1539 aa27.89■■■□□ 2.06
EXOSC3-202ENST00000396521 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.05
EXOSC3-202ENST00000396521 FBXO31Q5XUX0 539 aaPredicted RBP27.88■■■□□ 2.05
EXOSC3-202ENST00000396521 ANKLE2Q86XL3 938 aa27.88■■■□□ 2.05
EXOSC3-202ENST00000396521 DNMT1P26358 1616 aaKnown RBP27.88■■■□□ 2.05
EXOSC3-202ENST00000396521 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
EXOSC3-202ENST00000396521 NLRP1Q9C000 1473 aa27.84■■■□□ 2.05
EXOSC3-202ENST00000396521 TOM1O60784 492 aa27.83■■■□□ 2.05
EXOSC3-202ENST00000396521 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
EXOSC3-202ENST00000396521 CPS1P31327 1500 aa27.82■■■□□ 2.04
EXOSC3-202ENST00000396521 SHANK2Q9UPX8 1470 aa27.78■■■□□ 2.04
EXOSC3-202ENST00000396521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.03
EXOSC3-202ENST00000396521 MED14O60244 1454 aa27.74■■■□□ 2.03
EXOSC3-202ENST00000396521 LRRC9Q6ZRR7 1453 aa27.74■■■□□ 2.03
EXOSC3-202ENST00000396521 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
EXOSC3-202ENST00000396521 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
EXOSC3-202ENST00000396521 NEURL4Q96JN8 1562 aa27.72■■■□□ 2.03
EXOSC3-202ENST00000396521 POLR1AO95602 1720 aaPredicted RBP27.71■■■□□ 2.03
EXOSC3-202ENST00000396521 NPHP4O75161 1426 aaPredicted RBP27.7■■■□□ 2.03
EXOSC3-202ENST00000396521 SCAF1Q9H7N4 1312 aaKnown RBP27.68■■■□□ 2.02
EXOSC3-202ENST00000396521 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
EXOSC3-202ENST00000396521 DEPDC5O75140 1603 aa27.68■■■□□ 2.02
EXOSC3-202ENST00000396521 MAST1Q9Y2H9 1570 aa27.68■■■□□ 2.02
EXOSC3-202ENST00000396521 PIP4K2BP78356 416 aa27.67■■■□□ 2.02
EXOSC3-202ENST00000396521 HSPA1LP34931 641 aa27.66■■■□□ 2.02
EXOSC3-202ENST00000396521 RNF17Q9BXT8 1623 aaKnown RBP27.66■■■□□ 2.02
EXOSC3-202ENST00000396521 MYOM3Q5VTT5 1437 aa27.65■■■□□ 2.02
EXOSC3-202ENST00000396521 ABCC3O15438 1527 aa27.64■■■□□ 2.02
EXOSC3-202ENST00000396521 ZC3H13Q5T200 1668 aaKnown RBP27.63■■■□□ 2.01
EXOSC3-202ENST00000396521 EIF2AK4Q9P2K8 1649 aaKnown RBP27.62■■■□□ 2.01
EXOSC3-202ENST00000396521 VWDEQ8N2E2 1590 aa27.61■■■□□ 2.01
EXOSC3-202ENST00000396521 ERVK-7P63135 1459 aa27.59■■■□□ 2.01
EXOSC3-202ENST00000396521 KANK4Q5T7N3 995 aaPredicted RBP27.58■■■□□ 2.01
EXOSC3-202ENST00000396521 DUOX2Q9NRD8 1548 aa27.57■■■□□ 2
EXOSC3-202ENST00000396521 ARHGAP31Q2M1Z3 1444 aa27.55■■■□□ 2
EXOSC3-202ENST00000396521 IQGAP1P46940 1657 aa27.53■■■□□ 2
EXOSC3-202ENST00000396521 LOC105371045A0A1W2PR82 267 aa27.52■■■□□ 2
EXOSC3-202ENST00000396521 KIF15Q9NS87 1388 aa27.51■■□□□ 1.99
EXOSC3-202ENST00000396521 APLP2Q06481 763 aa27.51■■□□□ 1.99
EXOSC3-202ENST00000396521 EID1Q9Y6B2 187 aa27.51■■□□□ 1.99
EXOSC3-202ENST00000396521 ERBINQ96RT1 1412 aa27.5■■□□□ 1.99
EXOSC3-202ENST00000396521 SCAF11Q99590 1463 aaKnown RBP27.5■■□□□ 1.99
EXOSC3-202ENST00000396521 MROH1Q8NDA8 1641 aa27.49■■□□□ 1.99
EXOSC3-202ENST00000396521 TXNDC2Q86VQ3 553 aa27.49■■□□□ 1.99
EXOSC3-202ENST00000396521 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
EXOSC3-202ENST00000396521 KANK1Q14678 1352 aa27.47■■□□□ 1.99
EXOSC3-202ENST00000396521 MED1Q15648 1581 aaPredicted RBP27.46■■□□□ 1.99
EXOSC3-202ENST00000396521 RRP7BPQ9NSQ0 103 aa27.45■■□□□ 1.98
EXOSC3-202ENST00000396521 SLIT1O75093 1534 aa27.45■■□□□ 1.98
EXOSC3-202ENST00000396521 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
EXOSC3-202ENST00000396521 SYNMO15061 1565 aa27.44■■□□□ 1.98
EXOSC3-202ENST00000396521 ABCC5O15440 1437 aa27.44■■□□□ 1.98
EXOSC3-202ENST00000396521 PRDM15P57071 1507 aaPredicted RBP27.44■■□□□ 1.98
EXOSC3-202ENST00000396521 LTKP29376 864 aa27.43■■□□□ 1.98
EXOSC3-202ENST00000396521 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
EXOSC3-202ENST00000396521 STAG3Q9UJ98 1225 aa27.41■■□□□ 1.98
EXOSC3-202ENST00000396521 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
EXOSC3-202ENST00000396521 ALKQ9UM73 1620 aa27.41■■□□□ 1.98
EXOSC3-202ENST00000396521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.39■■□□□ 1.98
EXOSC3-202ENST00000396521 ANKRD30AQ9BXX3 1397 aa27.38■■□□□ 1.97
EXOSC3-202ENST00000396521 TMEM2Q9UHN6 1383 aa27.38■■□□□ 1.97
EXOSC3-202ENST00000396521 CEP152O94986 1710 aa27.37■■□□□ 1.97
EXOSC3-202ENST00000396521 DAPK1P53355 1430 aa27.36■■□□□ 1.97
EXOSC3-202ENST00000396521 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
EXOSC3-202ENST00000396521 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
EXOSC3-202ENST00000396521 STRCP1A6NGW2 1772 aa27.32■■□□□ 1.96
EXOSC3-202ENST00000396521 LMTK2Q8IWU2 1503 aa27.32■■□□□ 1.96
EXOSC3-202ENST00000396521 IDI1Q13907 227 aa27.31■■□□□ 1.96
EXOSC3-202ENST00000396521 SLC52A1Q9NWF4 448 aa27.3■■□□□ 1.96
EXOSC3-202ENST00000396521 CROCC2H7BZ55 1655 aa27.29■■□□□ 1.96
EXOSC3-202ENST00000396521 CFAP65Q6ZU64 1925 aaKnown RBP27.29■■□□□ 1.96
EXOSC3-202ENST00000396521 KCNA6P17658 529 aa27.28■■□□□ 1.96
EXOSC3-202ENST00000396521 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
EXOSC3-202ENST00000396521 EFCAB6Q5THR3 1501 aa27.27■■□□□ 1.96
EXOSC3-202ENST00000396521 FAM135BQ49AJ0 1406 aa27.27■■□□□ 1.96
EXOSC3-202ENST00000396521 CHIC2Q9UKJ5 165 aa27.25■■□□□ 1.95
EXOSC3-202ENST00000396521 PIK3C2BO00750 1634 aa27.24■■□□□ 1.95
EXOSC3-202ENST00000396521 NOS1P29475 1434 aa27.23■■□□□ 1.95
EXOSC3-202ENST00000396521 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
EXOSC3-202ENST00000396521 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
EXOSC3-202ENST00000396521 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
EXOSC3-202ENST00000396521 PROSER2Q86WR7 435 aaPredicted RBP27.2■■□□□ 1.94
EXOSC3-202ENST00000396521 ADGRL2O95490 1459 aa27.19■■□□□ 1.94
EXOSC3-202ENST00000396521 RPRD2Q5VT52 1461 aaKnown RBP27.19■■□□□ 1.94
EXOSC3-202ENST00000396521 SLC26A8Q96RN1 970 aa27.17■■□□□ 1.94
EXOSC3-202ENST00000396521 TET3O43151 1660 aa27.16■■□□□ 1.94
EXOSC3-202ENST00000396521 NKTRP30414 1462 aaKnown RBP27.14■■□□□ 1.94
EXOSC3-202ENST00000396521 ADGRB3O60242 1522 aa27.13■■□□□ 1.93
EXOSC3-202ENST00000396521 BCANQ96GW7 911 aa27.13■■□□□ 1.93
EXOSC3-202ENST00000396521 ANKRD50Q9ULJ7 1429 aa27.13■■□□□ 1.93
EXOSC3-202ENST00000396521 FAM50AQ14320 339 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms