RNA–Protein interactions for RNA: ENST00000396075.5

LDHB-202, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-202ENST00000396075 KIF3BO15066 747 aa13.17□□□□□ -0.3
LDHB-202ENST00000396075 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
LDHB-202ENST00000396075 MROH2AA6NES4 1674 aa13.17□□□□□ -0.3
LDHB-202ENST00000396075 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
LDHB-202ENST00000396075 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
LDHB-202ENST00000396075 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
LDHB-202ENST00000396075 KANK4Q5T7N3 995 aaPredicted RBP13.14□□□□□ -0.31
LDHB-202ENST00000396075 ARHGEF5Q12774 1597 aa13.14□□□□□ -0.31
LDHB-202ENST00000396075 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
LDHB-202ENST00000396075 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
LDHB-202ENST00000396075 CLTCQ00610 1675 aaKnown RBP13.12□□□□□ -0.31
LDHB-202ENST00000396075 PKD2Q13563 968 aa13.12□□□□□ -0.31
LDHB-202ENST00000396075 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
LDHB-202ENST00000396075 PTPRTO14522 1441 aa13.12□□□□□ -0.31
LDHB-202ENST00000396075 CAMSAP1Q5T5Y3 1602 aa13.11□□□□□ -0.31
LDHB-202ENST00000396075 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
LDHB-202ENST00000396075 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
LDHB-202ENST00000396075 FAM135AQ9P2D6 1515 aa13.11□□□□□ -0.31
LDHB-202ENST00000396075 NCOA1Q15788 1441 aa13.09□□□□□ -0.31
LDHB-202ENST00000396075 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
LDHB-202ENST00000396075 PTPRKQ15262 1439 aa13.08□□□□□ -0.32
LDHB-202ENST00000396075 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
LDHB-202ENST00000396075 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
LDHB-202ENST00000396075 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
LDHB-202ENST00000396075 MAST1Q9Y2H9 1570 aa13.06□□□□□ -0.32
LDHB-202ENST00000396075 ZNF335Q9H4Z2 1342 aaPredicted RBP13.05□□□□□ -0.32
LDHB-202ENST00000396075 TNRQ92752 1358 aa13.05□□□□□ -0.32
LDHB-202ENST00000396075 PZPP20742 1482 aa13.04□□□□□ -0.32
LDHB-202ENST00000396075 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
LDHB-202ENST00000396075 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
LDHB-202ENST00000396075 FBXO31Q5XUX0 539 aaPredicted RBP13.03□□□□□ -0.32
LDHB-202ENST00000396075 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
LDHB-202ENST00000396075 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
LDHB-202ENST00000396075 DUOX2Q9NRD8 1548 aa13.03□□□□□ -0.32
LDHB-202ENST00000396075 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
LDHB-202ENST00000396075 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
LDHB-202ENST00000396075 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
LDHB-202ENST00000396075 KANK1Q14678 1352 aa13.02□□□□□ -0.33
LDHB-202ENST00000396075 ANKRD30AQ9BXX3 1397 aa13.02□□□□□ -0.33
LDHB-202ENST00000396075 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
LDHB-202ENST00000396075 SHANK2Q9UPX8 1470 aa13.01□□□□□ -0.33
LDHB-202ENST00000396075 PTPN23Q9H3S7 1636 aa13.01□□□□□ -0.33
LDHB-202ENST00000396075 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
LDHB-202ENST00000396075 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
LDHB-202ENST00000396075 NLRP1Q9C000 1473 aa13□□□□□ -0.33
LDHB-202ENST00000396075 KIF15Q9NS87 1388 aa13□□□□□ -0.33
LDHB-202ENST00000396075 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
LDHB-202ENST00000396075 ABCC5O15440 1437 aa12.99□□□□□ -0.33
LDHB-202ENST00000396075 ERBINQ96RT1 1412 aa12.99□□□□□ -0.33
LDHB-202ENST00000396075 FAM50AQ14320 339 aaKnown RBP12.99□□□□□ -0.33
LDHB-202ENST00000396075 ZC3H13Q5T200 1668 aaKnown RBP12.99□□□□□ -0.33
LDHB-202ENST00000396075 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
LDHB-202ENST00000396075 DAPK1P53355 1430 aa12.98□□□□□ -0.33
LDHB-202ENST00000396075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.98□□□□□ -0.335e-9■■■■■ 39.5
LDHB-202ENST00000396075 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
LDHB-202ENST00000396075 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
LDHB-202ENST00000396075 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
LDHB-202ENST00000396075 POLR1AO95602 1720 aaPredicted RBP12.96□□□□□ -0.33
LDHB-202ENST00000396075 DNMT1P26358 1616 aaKnown RBP12.96□□□□□ -0.33
LDHB-202ENST00000396075 ABCC3O15438 1527 aa12.95□□□□□ -0.34
LDHB-202ENST00000396075 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
LDHB-202ENST00000396075 UGGT1Q9NYU2 1555 aa12.94□□□□□ -0.34
LDHB-202ENST00000396075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
LDHB-202ENST00000396075 CROCC2H7BZ55 1655 aa12.93□□□□□ -0.34
LDHB-202ENST00000396075 EID1Q9Y6B2 187 aa12.93□□□□□ -0.34
LDHB-202ENST00000396075 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
LDHB-202ENST00000396075 PIP4K2BP78356 416 aa12.92□□□□□ -0.34
LDHB-202ENST00000396075 RNF39Q9H2S5 420 aa12.92□□□□□ -0.34
LDHB-202ENST00000396075 NEURL4Q96JN8 1562 aa12.91□□□□□ -0.34
LDHB-202ENST00000396075 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
LDHB-202ENST00000396075 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
LDHB-202ENST00000396075 TOM1O60784 492 aa12.9□□□□□ -0.34
LDHB-202ENST00000396075 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
LDHB-202ENST00000396075 HSPA1LP34931 641 aa12.89□□□□□ -0.35
LDHB-202ENST00000396075 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
LDHB-202ENST00000396075 NPHP4O75161 1426 aaPredicted RBP12.88□□□□□ -0.35
LDHB-202ENST00000396075 TXNDC2Q86VQ3 553 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 ADGRL2O95490 1459 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 CEP152O94986 1710 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 DEPDC5O75140 1603 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 CPS1P31327 1500 aa12.88□□□□□ -0.35
LDHB-202ENST00000396075 MED14O60244 1454 aa12.87□□□□□ -0.35
LDHB-202ENST00000396075 MROH1Q8NDA8 1641 aa12.87□□□□□ -0.35
LDHB-202ENST00000396075 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
LDHB-202ENST00000396075 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
LDHB-202ENST00000396075 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
LDHB-202ENST00000396075 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
LDHB-202ENST00000396075 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
LDHB-202ENST00000396075 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
LDHB-202ENST00000396075 ALKQ9UM73 1620 aa12.84□□□□□ -0.35
LDHB-202ENST00000396075 ROCK1Q13464 1354 aa12.83□□□□□ -0.36
LDHB-202ENST00000396075 IDI1Q13907 227 aa12.83□□□□□ -0.36
LDHB-202ENST00000396075 SCAF11Q99590 1463 aaKnown RBP12.83□□□□□ -0.36
LDHB-202ENST00000396075 ITGAEP38570 1179 aa12.82□□□□□ -0.36
LDHB-202ENST00000396075 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
LDHB-202ENST00000396075 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
LDHB-202ENST00000396075 BCANQ96GW7 911 aa12.81□□□□□ -0.36
LDHB-202ENST00000396075 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
LDHB-202ENST00000396075 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms