RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 CERKQ8TCT0 537 aa17.58■□□□□ 0.4
CNIH1-202ENST00000395573 LRRC9Q6ZRR7 1453 aa17.56■□□□□ 0.4
CNIH1-202ENST00000395573 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
CNIH1-202ENST00000395573 GGT6Q6P531 493 aa17.56■□□□□ 0.4
CNIH1-202ENST00000395573 CEP170BQ9Y4F5 1589 aaPredicted RBP17.56■□□□□ 0.4
CNIH1-202ENST00000395573 PTPRTO14522 1441 aa17.55■□□□□ 0.4
CNIH1-202ENST00000395573 NCOA1Q15788 1441 aa17.55■□□□□ 0.4
CNIH1-202ENST00000395573 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
CNIH1-202ENST00000395573 CFAP65Q6ZU64 1925 aaKnown RBP17.53■□□□□ 0.4
CNIH1-202ENST00000395573 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
CNIH1-202ENST00000395573 DHX29Q7Z478 1369 aaKnown RBP17.52■□□□□ 0.39
CNIH1-202ENST00000395573 MAP3K1Q13233 1512 aa17.52■□□□□ 0.39
CNIH1-202ENST00000395573 KDM5DQ9BY66 1539 aa17.51■□□□□ 0.39
CNIH1-202ENST00000395573 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
CNIH1-202ENST00000395573 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
CNIH1-202ENST00000395573 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
CNIH1-202ENST00000395573 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
CNIH1-202ENST00000395573 DNMT1P26358 1616 aaKnown RBP17.49■□□□□ 0.39
CNIH1-202ENST00000395573 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
CNIH1-202ENST00000395573 ZC3H13Q5T200 1668 aaKnown RBP17.48■□□□□ 0.39
CNIH1-202ENST00000395573 EIF2AK4Q9P2K8 1649 aaKnown RBP17.48■□□□□ 0.39
CNIH1-202ENST00000395573 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
CNIH1-202ENST00000395573 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
CNIH1-202ENST00000395573 CEP152O94986 1710 aa17.47■□□□□ 0.39
CNIH1-202ENST00000395573 KIF3BO15066 747 aa17.47■□□□□ 0.39
CNIH1-202ENST00000395573 PLA2R1Q13018 1463 aa17.46■□□□□ 0.39
CNIH1-202ENST00000395573 MYOM3Q5VTT5 1437 aa17.45■□□□□ 0.38
CNIH1-202ENST00000395573 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
CNIH1-202ENST00000395573 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
CNIH1-202ENST00000395573 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
CNIH1-202ENST00000395573 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
CNIH1-202ENST00000395573 PZPP20742 1482 aa17.44■□□□□ 0.38
CNIH1-202ENST00000395573 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
CNIH1-202ENST00000395573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
CNIH1-202ENST00000395573 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
CNIH1-202ENST00000395573 MIA2Q96PC5 1412 aa17.42■□□□□ 0.38
CNIH1-202ENST00000395573 PTPN23Q9H3S7 1636 aa17.42■□□□□ 0.38
CNIH1-202ENST00000395573 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
CNIH1-202ENST00000395573 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
CNIH1-202ENST00000395573 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
CNIH1-202ENST00000395573 TNRQ92752 1358 aa17.4■□□□□ 0.38
CNIH1-202ENST00000395573 MROH1Q8NDA8 1641 aa17.39■□□□□ 0.37
CNIH1-202ENST00000395573 PKD2Q13563 968 aa17.38■□□□□ 0.37
CNIH1-202ENST00000395573 ABCC3O15438 1527 aa17.37■□□□□ 0.37
CNIH1-202ENST00000395573 NEURL4Q96JN8 1562 aa17.37■□□□□ 0.37
CNIH1-202ENST00000395573 FBXO31Q5XUX0 539 aaPredicted RBP17.37■□□□□ 0.37
CNIH1-202ENST00000395573 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
CNIH1-202ENST00000395573 APLP2Q06481 763 aa17.35■□□□□ 0.37
CNIH1-202ENST00000395573 NLRP1Q9C000 1473 aa17.34■□□□□ 0.37
CNIH1-202ENST00000395573 ZNF335Q9H4Z2 1342 aaPredicted RBP17.34■□□□□ 0.37
CNIH1-202ENST00000395573 UGGT1Q9NYU2 1555 aa17.34■□□□□ 0.37
CNIH1-202ENST00000395573 SHANK2Q9UPX8 1470 aa17.34■□□□□ 0.37
CNIH1-202ENST00000395573 DEPDC5O75140 1603 aa17.33■□□□□ 0.37
CNIH1-202ENST00000395573 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.37
CNIH1-202ENST00000395573 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
CNIH1-202ENST00000395573 IQGAP1P46940 1657 aa17.32■□□□□ 0.36
CNIH1-202ENST00000395573 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
CNIH1-202ENST00000395573 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
CNIH1-202ENST00000395573 ERVK-7P63135 1459 aa17.29■□□□□ 0.36
CNIH1-202ENST00000395573 ABCC5O15440 1437 aa17.29■□□□□ 0.36
CNIH1-202ENST00000395573 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
CNIH1-202ENST00000395573 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
CNIH1-202ENST00000395573 DAPK1P53355 1430 aa17.28■□□□□ 0.36
CNIH1-202ENST00000395573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNIH1-202ENST00000395573 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
CNIH1-202ENST00000395573 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
CNIH1-202ENST00000395573 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
CNIH1-202ENST00000395573 CPS1P31327 1500 aa17.25■□□□□ 0.35
CNIH1-202ENST00000395573 VWDEQ8N2E2 1590 aa17.24■□□□□ 0.35
CNIH1-202ENST00000395573 ANKLE2Q86XL3 938 aa17.24■□□□□ 0.35
CNIH1-202ENST00000395573 MED14O60244 1454 aa17.24■□□□□ 0.35
CNIH1-202ENST00000395573 PIK3C2BO00750 1634 aa17.23■□□□□ 0.35
CNIH1-202ENST00000395573 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
CNIH1-202ENST00000395573 UBAP1LF5GYI3 381 aa17.22■□□□□ 0.35
CNIH1-202ENST00000395573 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
CNIH1-202ENST00000395573 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.35
CNIH1-202ENST00000395573 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
CNIH1-202ENST00000395573 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
CNIH1-202ENST00000395573 ARHGAP31Q2M1Z3 1444 aa17.2■□□□□ 0.34
CNIH1-202ENST00000395573 SYNMO15061 1565 aa17.19■□□□□ 0.34
CNIH1-202ENST00000395573 ANKRD30AQ9BXX3 1397 aa17.19■□□□□ 0.34
CNIH1-202ENST00000395573 KANK1Q14678 1352 aa17.18■□□□□ 0.34
CNIH1-202ENST00000395573 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
CNIH1-202ENST00000395573 XIRP1Q702N8 1843 aaKnown RBP17.17■□□□□ 0.34
CNIH1-202ENST00000395573 ADGRL2O95490 1459 aa17.16■□□□□ 0.34
CNIH1-202ENST00000395573 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
CNIH1-202ENST00000395573 SLIT1O75093 1534 aa17.16■□□□□ 0.34
CNIH1-202ENST00000395573 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
CNIH1-202ENST00000395573 LMTK2Q8IWU2 1503 aa17.16■□□□□ 0.34
CNIH1-202ENST00000395573 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
CNIH1-202ENST00000395573 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
CNIH1-202ENST00000395573 TET3O43151 1660 aa17.13■□□□□ 0.33
CNIH1-202ENST00000395573 FAM50AQ14320 339 aaKnown RBP17.12■□□□□ 0.33
CNIH1-202ENST00000395573 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
CNIH1-202ENST00000395573 TOM1O60784 492 aa17.09■□□□□ 0.33
CNIH1-202ENST00000395573 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
CNIH1-202ENST00000395573 UNC13BO14795 1591 aa17.09■□□□□ 0.33
CNIH1-202ENST00000395573 ADGRB3O60242 1522 aa17.08■□□□□ 0.32
CNIH1-202ENST00000395573 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
CNIH1-202ENST00000395573 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms