RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 FAM135AQ9P2D6 1515 aa32.14■■■□□ 2.74
POLR2J-202ENST00000393794 FBXO31Q5XUX0 539 aaPredicted RBP32.12■■■□□ 2.73
POLR2J-202ENST00000393794 PZPP20742 1482 aa32.11■■■□□ 2.73
POLR2J-202ENST00000393794 TNRQ92752 1358 aa32.1■■■□□ 2.73
POLR2J-202ENST00000393794 POLR1AO95602 1720 aaPredicted RBP32.09■■■□□ 2.73
POLR2J-202ENST00000393794 CPS1P31327 1500 aa32.07■■■□□ 2.72
POLR2J-202ENST00000393794 KIF3BO15066 747 aa32.07■■■□□ 2.72
POLR2J-202ENST00000393794 KDM5DQ9BY66 1539 aa32.06■■■□□ 2.72
POLR2J-202ENST00000393794 CCDC141Q6ZP82 1450 aa32.06■■■□□ 2.72
POLR2J-202ENST00000393794 RSPH4AQ5TD94 716 aa32.06■■■□□ 2.72
POLR2J-202ENST00000393794 SHANK2Q9UPX8 1470 aa32.05■■■□□ 2.72
POLR2J-202ENST00000393794 MIA2Q96PC5 1412 aa32.01■■■□□ 2.72
POLR2J-202ENST00000393794 MED14O60244 1454 aa32.01■■■□□ 2.71
POLR2J-202ENST00000393794 VWDEQ8N2E2 1590 aa32■■■□□ 2.71
POLR2J-202ENST00000393794 CAMSAP2Q08AD1 1489 aa32■■■□□ 2.71
POLR2J-202ENST00000393794 HSPA1LP34931 641 aa32■■■□□ 2.71
POLR2J-202ENST00000393794 NCOA2Q15596 1464 aa31.99■■■□□ 2.71
POLR2J-202ENST00000393794 NLRP1Q9C000 1473 aa31.98■■■□□ 2.71
POLR2J-202ENST00000393794 WASHC2CQ9Y4E1 1318 aa31.98■■■□□ 2.71
POLR2J-202ENST00000393794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.97■■■□□ 2.71
POLR2J-202ENST00000393794 TOM1O60784 492 aa31.97■■■□□ 2.71
POLR2J-202ENST00000393794 ANKLE2Q86XL3 938 aa31.97■■■□□ 2.71
POLR2J-202ENST00000393794 ARHGEF5Q12774 1597 aa31.96■■■□□ 2.71
POLR2J-202ENST00000393794 THEMISQ8N1K5 641 aaPredicted RBP31.96■■■□□ 2.71
POLR2J-202ENST00000393794 DEPDC5O75140 1603 aa31.96■■■□□ 2.71
POLR2J-202ENST00000393794 ALKQ9UM73 1620 aa31.96■■■□□ 2.71
POLR2J-202ENST00000393794 MED1Q15648 1581 aaPredicted RBP31.92■■■□□ 2.7
POLR2J-202ENST00000393794 UGGT1Q9NYU2 1555 aa31.92■■■□□ 2.7
POLR2J-202ENST00000393794 NPHP4O75161 1426 aaPredicted RBP31.9■■■□□ 2.7
POLR2J-202ENST00000393794 PIP4K2BP78356 416 aa31.88■■■□□ 2.69
POLR2J-202ENST00000393794 RNF17Q9BXT8 1623 aaKnown RBP31.87■■■□□ 2.69
POLR2J-202ENST00000393794 TSPY4P0CV99 314 aa31.84■■■□□ 2.69
POLR2J-202ENST00000393794 TSPY10P0CW01 314 aa31.84■■■□□ 2.69
POLR2J-202ENST00000393794 ABCC3O15438 1527 aa31.83■■■□□ 2.69
POLR2J-202ENST00000393794 MAST1Q9Y2H9 1570 aa31.82■■■□□ 2.68
POLR2J-202ENST00000393794 STRCP1A6NGW2 1772 aa31.81■■■□□ 2.68
POLR2J-202ENST00000393794 SCAF1Q9H7N4 1312 aaKnown RBP31.81■■■□□ 2.68
POLR2J-202ENST00000393794 IQGAP1P46940 1657 aa31.81■■■□□ 2.68
POLR2J-202ENST00000393794 ZC3H13Q5T200 1668 aaKnown RBP31.79■■■□□ 2.68
POLR2J-202ENST00000393794 MROH1Q8NDA8 1641 aa31.78■■■□□ 2.68
POLR2J-202ENST00000393794 LRRC7Q96NW7 1537 aa31.77■■■□□ 2.68
POLR2J-202ENST00000393794 ERVK-7P63135 1459 aa31.76■■■□□ 2.67
POLR2J-202ENST00000393794 EIF2AK4Q9P2K8 1649 aaKnown RBP31.75■■■□□ 2.67
POLR2J-202ENST00000393794 LRRC9Q6ZRR7 1453 aa31.73■■■□□ 2.67
POLR2J-202ENST00000393794 SYNMO15061 1565 aa31.69■■■□□ 2.66
POLR2J-202ENST00000393794 UBR1Q8IWV7 1749 aa31.69■■■□□ 2.66
POLR2J-202ENST00000393794 ARHGAP23Q9P227 1491 aa31.66■■■□□ 2.66
POLR2J-202ENST00000393794 ARHGAP31Q2M1Z3 1444 aa31.64■■■□□ 2.66
POLR2J-202ENST00000393794 VPS8Q8N3P4 1428 aa31.64■■■□□ 2.66
POLR2J-202ENST00000393794 SLIT1O75093 1534 aa31.64■■■□□ 2.66
POLR2J-202ENST00000393794 CFAP65Q6ZU64 1925 aaKnown RBP31.63■■■□□ 2.65
POLR2J-202ENST00000393794 MAP3K1Q13233 1512 aa31.63■■■□□ 2.65
POLR2J-202ENST00000393794 CEP152O94986 1710 aa31.63■■■□□ 2.65
POLR2J-202ENST00000393794 LTKP29376 864 aa31.62■■■□□ 2.65
POLR2J-202ENST00000393794 SCAF11Q99590 1463 aaKnown RBP31.61■■■□□ 2.65
POLR2J-202ENST00000393794 DUOX2Q9NRD8 1548 aa31.6■■■□□ 2.65
POLR2J-202ENST00000393794 KANK4Q5T7N3 995 aaPredicted RBP31.6■■■□□ 2.65
POLR2J-202ENST00000393794 MYOM3Q5VTT5 1437 aa31.59■■■□□ 2.65
POLR2J-202ENST00000393794 XIRP1Q702N8 1843 aaKnown RBP31.56■■■□□ 2.64
POLR2J-202ENST00000393794 PRDM15P57071 1507 aaPredicted RBP31.56■■■□□ 2.64
POLR2J-202ENST00000393794 PHF23Q9BUL5 403 aaPredicted RBP31.54■■■□□ 2.64
POLR2J-202ENST00000393794 TXNDC2Q86VQ3 553 aa31.53■■■□□ 2.64
POLR2J-202ENST00000393794 RGS17Q9UGC6 210 aaPredicted RBP31.51■■■□□ 2.63
POLR2J-202ENST00000393794 ERBINQ96RT1 1412 aa31.49■■■□□ 2.63
POLR2J-202ENST00000393794 KIF15Q9NS87 1388 aa31.48■■■□□ 2.63
POLR2J-202ENST00000393794 ABCC5O15440 1437 aa31.48■■■□□ 2.63
POLR2J-202ENST00000393794 TMEM2Q9UHN6 1383 aa31.46■■■□□ 2.63
POLR2J-202ENST00000393794 FAM135BQ49AJ0 1406 aa31.45■■■□□ 2.63
POLR2J-202ENST00000393794 PIK3C2BO00750 1634 aa31.44■■■□□ 2.62
POLR2J-202ENST00000393794 KDM5AP29375 1690 aaKnown RBP31.44■■■□□ 2.62
POLR2J-202ENST00000393794 CROCC2H7BZ55 1655 aa31.43■■■□□ 2.62
POLR2J-202ENST00000393794 EID1Q9Y6B2 187 aa31.42■■■□□ 2.62
POLR2J-202ENST00000393794 LMTK2Q8IWU2 1503 aa31.4■■■□□ 2.62
POLR2J-202ENST00000393794 SENP3Q9H4L4 574 aaPredicted RBP31.4■■■□□ 2.62
POLR2J-202ENST00000393794 TET3O43151 1660 aa31.39■■■□□ 2.62
POLR2J-202ENST00000393794 RRP7BPQ9NSQ0 103 aa31.39■■■□□ 2.62
POLR2J-202ENST00000393794 LOC105371045A0A1W2PR82 267 aa31.38■■■□□ 2.61
POLR2J-202ENST00000393794 IDI1Q13907 227 aa31.37■■■□□ 2.61
POLR2J-202ENST00000393794 KCNA6P17658 529 aa31.35■■■□□ 2.61
POLR2J-202ENST00000393794 PTPN23Q9H3S7 1636 aa31.35■■■□□ 2.61
POLR2J-202ENST00000393794 EFCAB6Q5THR3 1501 aa31.34■■■□□ 2.61
POLR2J-202ENST00000393794 DAPK1P53355 1430 aa31.34■■■□□ 2.61
POLR2J-202ENST00000393794 TMEM94Q12767 1356 aa31.34■■■□□ 2.61
POLR2J-202ENST00000393794 NOS1P29475 1434 aa31.32■■■□□ 2.6
POLR2J-202ENST00000393794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.3■■■□□ 2.6
POLR2J-202ENST00000393794 KANK1Q14678 1352 aa31.3■■■□□ 2.6
POLR2J-202ENST00000393794 NWD1Q149M9 1564 aa31.25■■■□□ 2.59
POLR2J-202ENST00000393794 FGD6Q6ZV73 1430 aa31.24■■■□□ 2.59
POLR2J-202ENST00000393794 POTEAQ6S8J7 498 aa31.24■■■□□ 2.59
POLR2J-202ENST00000393794 SLC26A8Q96RN1 970 aa31.24■■■□□ 2.59
POLR2J-202ENST00000393794 STAG3Q9UJ98 1225 aa31.24■■■□□ 2.59
POLR2J-202ENST00000393794 ROBO1Q9Y6N7 1651 aa31.24■■■□□ 2.59
POLR2J-202ENST00000393794 ANKRD30AQ9BXX3 1397 aa31.22■■■□□ 2.59
POLR2J-202ENST00000393794 NKTRP30414 1462 aaKnown RBP31.21■■■□□ 2.59
POLR2J-202ENST00000393794 ADGRB3O60242 1522 aa31.21■■■□□ 2.59
POLR2J-202ENST00000393794 PROSER2Q86WR7 435 aaPredicted RBP31.21■■■□□ 2.59
POLR2J-202ENST00000393794 SLC52A1Q9NWF4 448 aa31.2■■■□□ 2.59
POLR2J-202ENST00000393794 RBM33Q96EV2 1170 aaKnown RBP31.17■■■□□ 2.58
POLR2J-202ENST00000393794 ADGRL2O95490 1459 aa31.16■■■□□ 2.58
POLR2J-202ENST00000393794 CHIC2Q9UKJ5 165 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms