RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 ILDR2Q71H61 639 aa29.98■■■□□ 2.39
CRAT-202ENST00000393384 SPATA31D1Q6ZQQ2 1576 aa29.96■■■□□ 2.39
CRAT-202ENST00000393384 TCOF1Q13428 1488 aaKnown RBP29.96■■■□□ 2.39
CRAT-202ENST00000393384 APLP2Q06481 763 aa29.96■■■□□ 2.39
CRAT-202ENST00000393384 ZNF335Q9H4Z2 1342 aaPredicted RBP29.95■■■□□ 2.38
CRAT-202ENST00000393384 DHX29Q7Z478 1369 aaKnown RBP29.94■■■□□ 2.38
CRAT-202ENST00000393384 MYOM3Q5VTT5 1437 aa29.94■■■□□ 2.38
CRAT-202ENST00000393384 MIA2Q96PC5 1412 aa29.94■■■□□ 2.38
CRAT-202ENST00000393384 SOCS7O14512 581 aa29.91■■■□□ 2.38
CRAT-202ENST00000393384 TSPY4P0CV99 314 aa29.9■■■□□ 2.38
CRAT-202ENST00000393384 TSPY10P0CW01 314 aa29.9■■■□□ 2.38
CRAT-202ENST00000393384 A2ML1A8K2U0 1454 aa29.88■■■□□ 2.37
CRAT-202ENST00000393384 MAST1Q9Y2H9 1570 aa29.88■■■□□ 2.37
CRAT-202ENST00000393384 UBAP1LF5GYI3 381 aa29.85■■■□□ 2.37
CRAT-202ENST00000393384 DNMT1P26358 1616 aaKnown RBP29.83■■■□□ 2.37
CRAT-202ENST00000393384 FAM135AQ9P2D6 1515 aa29.83■■■□□ 2.37
CRAT-202ENST00000393384 KIF3BO15066 747 aa29.81■■■□□ 2.36
CRAT-202ENST00000393384 TNRQ92752 1358 aa29.79■■■□□ 2.36
CRAT-202ENST00000393384 PTPN23Q9H3S7 1636 aa29.79■■■□□ 2.36
CRAT-202ENST00000393384 KDM5DQ9BY66 1539 aa29.79■■■□□ 2.36
CRAT-202ENST00000393384 PZPP20742 1482 aa29.78■■■□□ 2.36
CRAT-202ENST00000393384 CROCC2H7BZ55 1655 aa29.76■■■□□ 2.35
CRAT-202ENST00000393384 FBXO31Q5XUX0 539 aaPredicted RBP29.74■■■□□ 2.35
CRAT-202ENST00000393384 POLR1AO95602 1720 aaPredicted RBP29.74■■■□□ 2.35
CRAT-202ENST00000393384 WASHC2CQ9Y4E1 1318 aa29.73■■■□□ 2.35
CRAT-202ENST00000393384 EIF2AK4Q9P2K8 1649 aaKnown RBP29.72■■■□□ 2.35
CRAT-202ENST00000393384 RNF17Q9BXT8 1623 aaKnown RBP29.71■■■□□ 2.35
CRAT-202ENST00000393384 FGD6Q6ZV73 1430 aa29.7■■■□□ 2.34
CRAT-202ENST00000393384 NEURL4Q96JN8 1562 aa29.69■■■□□ 2.34
CRAT-202ENST00000393384 CPS1P31327 1500 aa29.69■■■□□ 2.34
CRAT-202ENST00000393384 SHANK2Q9UPX8 1470 aa29.68■■■□□ 2.34
CRAT-202ENST00000393384 ABCC5O15440 1437 aa29.67■■■□□ 2.34
CRAT-202ENST00000393384 NLRP1Q9C000 1473 aa29.67■■■□□ 2.34
CRAT-202ENST00000393384 ANKLE2Q86XL3 938 aa29.66■■■□□ 2.34
CRAT-202ENST00000393384 DUOX2Q9NRD8 1548 aa29.66■■■□□ 2.34
CRAT-202ENST00000393384 THEMISQ8N1K5 641 aaPredicted RBP29.65■■■□□ 2.34
CRAT-202ENST00000393384 ZC3H13Q5T200 1668 aaKnown RBP29.64■■■□□ 2.34
CRAT-202ENST00000393384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.33
CRAT-202ENST00000393384 DAPK1P53355 1430 aa29.63■■■□□ 2.33
CRAT-202ENST00000393384 UGGT1Q9NYU2 1555 aa29.62■■■□□ 2.33
CRAT-202ENST00000393384 TOM1O60784 492 aa29.61■■■□□ 2.33
CRAT-202ENST00000393384 MROH1Q8NDA8 1641 aa29.59■■■□□ 2.33
CRAT-202ENST00000393384 MED14O60244 1454 aa29.58■■■□□ 2.33
CRAT-202ENST00000393384 DEPDC5O75140 1603 aa29.58■■■□□ 2.33
CRAT-202ENST00000393384 SCAF1Q9H7N4 1312 aaKnown RBP29.58■■■□□ 2.33
CRAT-202ENST00000393384 NPHP4O75161 1426 aaPredicted RBP29.57■■■□□ 2.32
CRAT-202ENST00000393384 KIF15Q9NS87 1388 aa29.57■■■□□ 2.32
CRAT-202ENST00000393384 ABCC3O15438 1527 aa29.56■■■□□ 2.32
CRAT-202ENST00000393384 CEP152O94986 1710 aa29.56■■■□□ 2.32
CRAT-202ENST00000393384 VWDEQ8N2E2 1590 aa29.56■■■□□ 2.32
CRAT-202ENST00000393384 PIP4K2BP78356 416 aa29.55■■■□□ 2.32
CRAT-202ENST00000393384 ERBINQ96RT1 1412 aa29.54■■■□□ 2.32
CRAT-202ENST00000393384 HSPA1LP34931 641 aa29.54■■■□□ 2.32
CRAT-202ENST00000393384 RRP7BPQ9NSQ0 103 aa29.53■■■□□ 2.32
CRAT-202ENST00000393384 CFAP65Q6ZU64 1925 aaKnown RBP29.51■■■□□ 2.32
CRAT-202ENST00000393384 ANKRD30AQ9BXX3 1397 aa29.5■■■□□ 2.31
CRAT-202ENST00000393384 IQGAP1P46940 1657 aa29.5■■■□□ 2.31
CRAT-202ENST00000393384 PRDM15P57071 1507 aaPredicted RBP29.48■■■□□ 2.31
CRAT-202ENST00000393384 CHIC2Q9UKJ5 165 aa29.47■■■□□ 2.31
CRAT-202ENST00000393384 ERVK-7P63135 1459 aa29.47■■■□□ 2.31
CRAT-202ENST00000393384 MED1Q15648 1581 aaPredicted RBP29.46■■■□□ 2.31
CRAT-202ENST00000393384 FAM50AQ14320 339 aaKnown RBP29.45■■■□□ 2.31
CRAT-202ENST00000393384 ADGRL2O95490 1459 aa29.43■■■□□ 2.3
CRAT-202ENST00000393384 ALKQ9UM73 1620 aa29.39■■■□□ 2.3
CRAT-202ENST00000393384 SYNMO15061 1565 aa29.38■■■□□ 2.29
CRAT-202ENST00000393384 ARHGAP31Q2M1Z3 1444 aa29.37■■■□□ 2.29
CRAT-202ENST00000393384 LRRC7Q96NW7 1537 aa29.36■■■□□ 2.29
CRAT-202ENST00000393384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.36■■■□□ 2.29
CRAT-202ENST00000393384 UBR1Q8IWV7 1749 aa29.36■■■□□ 2.29
CRAT-202ENST00000393384 KANK1Q14678 1352 aa29.36■■■□□ 2.29
CRAT-202ENST00000393384 STRCP1A6NGW2 1772 aa29.36■■■□□ 2.29
CRAT-202ENST00000393384 SCAF11Q99590 1463 aaKnown RBP29.34■■■□□ 2.29
CRAT-202ENST00000393384 LMTK2Q8IWU2 1503 aa29.31■■■□□ 2.28
CRAT-202ENST00000393384 SLIT1O75093 1534 aa29.29■■■□□ 2.28
CRAT-202ENST00000393384 ARHGAP23Q9P227 1491 aa29.29■■■□□ 2.28
CRAT-202ENST00000393384 PHF23Q9BUL5 403 aaPredicted RBP29.28■■■□□ 2.28
CRAT-202ENST00000393384 ANKRD50Q9ULJ7 1429 aa29.28■■■□□ 2.28
CRAT-202ENST00000393384 TXNDC2Q86VQ3 553 aa29.26■■■□□ 2.27
CRAT-202ENST00000393384 LTKP29376 864 aa29.25■■■□□ 2.27
CRAT-202ENST00000393384 PPARGC1BQ86YN6 1023 aaKnown RBP29.24■■■□□ 2.27
CRAT-202ENST00000393384 EID1Q9Y6B2 187 aa29.23■■■□□ 2.27
CRAT-202ENST00000393384 ROCK1Q13464 1354 aa29.21■■■□□ 2.27
CRAT-202ENST00000393384 EFCAB6Q5THR3 1501 aa29.2■■■□□ 2.27
CRAT-202ENST00000393384 PIK3C2BO00750 1634 aa29.2■■■□□ 2.26
CRAT-202ENST00000393384 SENP3Q9H4L4 574 aaPredicted RBP29.18■■■□□ 2.26
CRAT-202ENST00000393384 KDM5AP29375 1690 aaKnown RBP29.18■■■□□ 2.26
CRAT-202ENST00000393384 TMEM2Q9UHN6 1383 aa29.17■■■□□ 2.26
CRAT-202ENST00000393384 UNC13BO14795 1591 aa29.17■■■□□ 2.26
CRAT-202ENST00000393384 STAG3Q9UJ98 1225 aa29.16■■■□□ 2.26
CRAT-202ENST00000393384 TET3O43151 1660 aa29.15■■■□□ 2.26
CRAT-202ENST00000393384 GCC2Q8IWJ2 1684 aa29.15■■■□□ 2.26
CRAT-202ENST00000393384 NOS1P29475 1434 aa29.13■■■□□ 2.25
CRAT-202ENST00000393384 RPRD2Q5VT52 1461 aaKnown RBP29.12■■■□□ 2.25
CRAT-202ENST00000393384 XIRP1Q702N8 1843 aaKnown RBP29.12■■■□□ 2.25
CRAT-202ENST00000393384 ITGAEP38570 1179 aa29.1■■■□□ 2.25
CRAT-202ENST00000393384 IDI1Q13907 227 aa29.09■■■□□ 2.25
CRAT-202ENST00000393384 IQGAP3Q86VI3 1631 aa29.06■■■□□ 2.24
CRAT-202ENST00000393384 RRBP1Q9P2E9 1410 aaKnown RBP29.06■■■□□ 2.24
CRAT-202ENST00000393384 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
CRAT-202ENST00000393384 KCNA6P17658 529 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms