RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 TIAM1Q13009 1591 aa11.4□□□□□ -0.58
TRAV27-201ENST00000390457 ZNF335Q9H4Z2 1342 aaPredicted RBP11.39□□□□□ -0.59
TRAV27-201ENST00000390457 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
TRAV27-201ENST00000390457 SOCS7O14512 581 aa11.39□□□□□ -0.59
TRAV27-201ENST00000390457 CEP162Q5TB80 1403 aa11.39□□□□□ -0.59
TRAV27-201ENST00000390457 CEP170BQ9Y4F5 1589 aaPredicted RBP11.39□□□□□ -0.59
TRAV27-201ENST00000390457 DHX29Q7Z478 1369 aaKnown RBP11.39□□□□□ -0.59
TRAV27-201ENST00000390457 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
TRAV27-201ENST00000390457 EHBP1L1Q8N3D4 1523 aa11.36□□□□□ -0.59
TRAV27-201ENST00000390457 A2ML1A8K2U0 1454 aa11.36□□□□□ -0.59
TRAV27-201ENST00000390457 SPATA31D1Q6ZQQ2 1576 aa11.35□□□□□ -0.59
TRAV27-201ENST00000390457 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
TRAV27-201ENST00000390457 FBXO31Q5XUX0 539 aaPredicted RBP11.34□□□□□ -0.59
TRAV27-201ENST00000390457 UBAP1LF5GYI3 381 aa11.33□□□□□ -0.6
TRAV27-201ENST00000390457 FAM135AQ9P2D6 1515 aa11.33□□□□□ -0.6
TRAV27-201ENST00000390457 PZPP20742 1482 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 KIF3BO15066 747 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 NEURL4Q96JN8 1562 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
TRAV27-201ENST00000390457 TNRQ92752 1358 aa11.31□□□□□ -0.6
TRAV27-201ENST00000390457 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
TRAV27-201ENST00000390457 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
TRAV27-201ENST00000390457 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
TRAV27-201ENST00000390457 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
TRAV27-201ENST00000390457 MED14O60244 1454 aa11.28□□□□□ -0.6
TRAV27-201ENST00000390457 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
TRAV27-201ENST00000390457 WASHC2CQ9Y4E1 1318 aa11.28□□□□□ -0.6
TRAV27-201ENST00000390457 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.61
TRAV27-201ENST00000390457 CPS1P31327 1500 aa11.27□□□□□ -0.61
TRAV27-201ENST00000390457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAV27-201ENST00000390457 NLRP1Q9C000 1473 aa11.26□□□□□ -0.61
TRAV27-201ENST00000390457 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
TRAV27-201ENST00000390457 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
TRAV27-201ENST00000390457 THEMISQ8N1K5 641 aaPredicted RBP11.26□□□□□ -0.61
TRAV27-201ENST00000390457 ALKQ9UM73 1620 aa11.25□□□□□ -0.61
TRAV27-201ENST00000390457 HSPA1LP34931 641 aa11.25□□□□□ -0.61
TRAV27-201ENST00000390457 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
TRAV27-201ENST00000390457 TSPY4P0CV99 314 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 TSPY10P0CW01 314 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
TRAV27-201ENST00000390457 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 MAST1Q9Y2H9 1570 aa11.24□□□□□ -0.61
TRAV27-201ENST00000390457 TOM1O60784 492 aa11.23□□□□□ -0.61
TRAV27-201ENST00000390457 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
TRAV27-201ENST00000390457 NPHP4O75161 1426 aaPredicted RBP11.23□□□□□ -0.61
TRAV27-201ENST00000390457 ABCC3O15438 1527 aa11.23□□□□□ -0.61
TRAV27-201ENST00000390457 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
TRAV27-201ENST00000390457 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
TRAV27-201ENST00000390457 VPS8Q8N3P4 1428 aa11.21□□□□□ -0.61
TRAV27-201ENST00000390457 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
TRAV27-201ENST00000390457 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
TRAV27-201ENST00000390457 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
TRAV27-201ENST00000390457 CNKSR2Q8WXI2 1034 aa11.2□□□□□ -0.62
TRAV27-201ENST00000390457 STRCP1A6NGW2 1772 aa11.2□□□□□ -0.62
TRAV27-201ENST00000390457 EIF2AK4Q9P2K8 1649 aaKnown RBP11.2□□□□□ -0.62
TRAV27-201ENST00000390457 ZC3H13Q5T200 1668 aaKnown RBP11.19□□□□□ -0.62
TRAV27-201ENST00000390457 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
TRAV27-201ENST00000390457 LRRC7Q96NW7 1537 aa11.19□□□□□ -0.62
TRAV27-201ENST00000390457 IQGAP1P46940 1657 aa11.18□□□□□ -0.62
TRAV27-201ENST00000390457 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
TRAV27-201ENST00000390457 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
TRAV27-201ENST00000390457 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
TRAV27-201ENST00000390457 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
TRAV27-201ENST00000390457 CFAP65Q6ZU64 1925 aaKnown RBP11.16□□□□□ -0.62
TRAV27-201ENST00000390457 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
TRAV27-201ENST00000390457 LTKP29376 864 aa11.16□□□□□ -0.62
TRAV27-201ENST00000390457 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.62
TRAV27-201ENST00000390457 SLIT1O75093 1534 aa11.15□□□□□ -0.62
TRAV27-201ENST00000390457 CEP152O94986 1710 aa11.15□□□□□ -0.63
TRAV27-201ENST00000390457 SCAF11Q99590 1463 aaKnown RBP11.14□□□□□ -0.63
TRAV27-201ENST00000390457 POTEHQ6S545 545 aa11.14□□□□□ -0.63
TRAV27-201ENST00000390457 ABCC5O15440 1437 aa11.14□□□□□ -0.63
TRAV27-201ENST00000390457 PRDM15P57071 1507 aaPredicted RBP11.14□□□□□ -0.63
TRAV27-201ENST00000390457 SYNMO15061 1565 aa11.13□□□□□ -0.63
TRAV27-201ENST00000390457 KIF15Q9NS87 1388 aa11.13□□□□□ -0.63
TRAV27-201ENST00000390457 ERBINQ96RT1 1412 aa11.12□□□□□ -0.63
TRAV27-201ENST00000390457 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
TRAV27-201ENST00000390457 XIRP1Q702N8 1843 aaKnown RBP11.1□□□□□ -0.63
TRAV27-201ENST00000390457 RRP7BPQ9NSQ0 103 aa11.1□□□□□ -0.63
TRAV27-201ENST00000390457 CROCC2H7BZ55 1655 aa11.09□□□□□ -0.63
TRAV27-201ENST00000390457 TMEM2Q9UHN6 1383 aa11.09□□□□□ -0.63
TRAV27-201ENST00000390457 LMTK2Q8IWU2 1503 aa11.09□□□□□ -0.63
TRAV27-201ENST00000390457 DAPK1P53355 1430 aa11.09□□□□□ -0.63
TRAV27-201ENST00000390457 IDI1Q13907 227 aa11.08□□□□□ -0.64
TRAV27-201ENST00000390457 RGS17Q9UGC6 210 aaPredicted RBP11.08□□□□□ -0.64
TRAV27-201ENST00000390457 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
TRAV27-201ENST00000390457 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
TRAV27-201ENST00000390457 NOS1P29475 1434 aa11.07□□□□□ -0.64
TRAV27-201ENST00000390457 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
TRAV27-201ENST00000390457 TET3O43151 1660 aa11.07□□□□□ -0.64
TRAV27-201ENST00000390457 KDM5AP29375 1690 aaKnown RBP11.07□□□□□ -0.64
TRAV27-201ENST00000390457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAV27-201ENST00000390457 EID1Q9Y6B2 187 aa11.06□□□□□ -0.64
TRAV27-201ENST00000390457 FGD6Q6ZV73 1430 aa11.06□□□□□ -0.64
TRAV27-201ENST00000390457 KCNA6P17658 529 aa11.05□□□□□ -0.64
TRAV27-201ENST00000390457 EFCAB6Q5THR3 1501 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms