RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 DMRT2Q9Y5R5 561 aa26.5■■□□□ 1.83
RER1-202ENST00000378512 CAMSAP1Q5T5Y3 1602 aa26.5■■□□□ 1.83
RER1-202ENST00000378512 KIF3BO15066 747 aa26.49■■□□□ 1.83
RER1-202ENST00000378512 SHANK2Q9UPX8 1470 aa26.49■■□□□ 1.83
RER1-202ENST00000378512 PTPRTO14522 1441 aa26.48■■□□□ 1.83
RER1-202ENST00000378512 ABCC5O15440 1437 aa26.47■■□□□ 1.83
RER1-202ENST00000378512 ZNF142P52746 1687 aaPredicted RBP26.45■■□□□ 1.83
RER1-202ENST00000378512 CEP170BQ9Y4F5 1589 aaPredicted RBP26.44■■□□□ 1.82
RER1-202ENST00000378512 NCKAP5LQ9HCH0 1330 aa26.44■■□□□ 1.82
RER1-202ENST00000378512 PPP6R1Q9UPN7 881 aa26.44■■□□□ 1.82
RER1-202ENST00000378512 DAPK1P53355 1430 aa26.43■■□□□ 1.82
RER1-202ENST00000378512 EIF2AK4Q9P2K8 1649 aaKnown RBP26.43■■□□□ 1.82
RER1-202ENST00000378512 FAM135AQ9P2D6 1515 aa26.43■■□□□ 1.82
RER1-202ENST00000378512 FBXO31Q5XUX0 539 aaPredicted RBP26.41■■□□□ 1.82
RER1-202ENST00000378512 KDM5DQ9BY66 1539 aa26.41■■□□□ 1.82
RER1-202ENST00000378512 RNF17Q9BXT8 1623 aaKnown RBP26.4■■□□□ 1.82
RER1-202ENST00000378512 LTBP4Q8N2S1 1624 aa26.39■■□□□ 1.82
RER1-202ENST00000378512 DUOX2Q9NRD8 1548 aa26.38■■□□□ 1.81
RER1-202ENST00000378512 WASHC2CQ9Y4E1 1318 aa26.35■■□□□ 1.81
RER1-202ENST00000378512 PZPP20742 1482 aa26.35■■□□□ 1.81
RER1-202ENST00000378512 A2ML1A8K2U0 1454 aa26.33■■□□□ 1.81
RER1-202ENST00000378512 PLA2R1Q13018 1463 aa26.33■■□□□ 1.81
RER1-202ENST00000378512 TNRQ92752 1358 aa26.33■■□□□ 1.81
RER1-202ENST00000378512 MROH1Q8NDA8 1641 aa26.33■■□□□ 1.81
RER1-202ENST00000378512 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
RER1-202ENST00000378512 KIF15Q9NS87 1388 aa26.31■■□□□ 1.8
RER1-202ENST00000378512 ERBINQ96RT1 1412 aa26.3■■□□□ 1.8
RER1-202ENST00000378512 ZC3H13Q5T200 1668 aaKnown RBP26.3■■□□□ 1.8
RER1-202ENST00000378512 ZNF335Q9H4Z2 1342 aaPredicted RBP26.29■■□□□ 1.8
RER1-202ENST00000378512 ABCC3O15438 1527 aa26.28■■□□□ 1.8
RER1-202ENST00000378512 DEPDC5O75140 1603 aa26.27■■□□□ 1.8
RER1-202ENST00000378512 PKD2Q13563 968 aa26.26■■□□□ 1.79
RER1-202ENST00000378512 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
RER1-202ENST00000378512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.25■■□□□ 1.794e-7■■■■□ 23.8
RER1-202ENST00000378512 PRDM15P57071 1507 aaPredicted RBP26.24■■□□□ 1.79
RER1-202ENST00000378512 FAM50AQ14320 339 aaKnown RBP26.22■■□□□ 1.79
RER1-202ENST00000378512 RRP7BPQ9NSQ0 103 aa26.22■■□□□ 1.79
RER1-202ENST00000378512 CEP152O94986 1710 aa26.22■■□□□ 1.79
RER1-202ENST00000378512 NEURL4Q96JN8 1562 aa26.22■■□□□ 1.79
RER1-202ENST00000378512 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
RER1-202ENST00000378512 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
RER1-202ENST00000378512 PPARGC1BQ86YN6 1023 aaKnown RBP26.18■■□□□ 1.78
RER1-202ENST00000378512 SPATA31D1Q6ZQQ2 1576 aa26.17■■□□□ 1.78
RER1-202ENST00000378512 NLRP1Q9C000 1473 aa26.16■■□□□ 1.78
RER1-202ENST00000378512 RRBP1Q9P2E9 1410 aaKnown RBP26.16■■□□□ 1.78
RER1-202ENST00000378512 ERVK-7P63135 1459 aa26.16■■□□□ 1.78
RER1-202ENST00000378512 VWDEQ8N2E2 1590 aa26.15■■□□□ 1.78
RER1-202ENST00000378512 UGGT1Q9NYU2 1555 aa26.15■■□□□ 1.78
RER1-202ENST00000378512 IQSEC2Q5JU85 1478 aa26.15■■□□□ 1.78
RER1-202ENST00000378512 ROCK1Q13464 1354 aa26.13■■□□□ 1.77
RER1-202ENST00000378512 CFAP65Q6ZU64 1925 aaKnown RBP26.12■■□□□ 1.77
RER1-202ENST00000378512 LMTK2Q8IWU2 1503 aa26.1■■□□□ 1.77
RER1-202ENST00000378512 THEMISQ8N1K5 641 aaPredicted RBP26.1■■□□□ 1.77
RER1-202ENST00000378512 ARHGAP31Q2M1Z3 1444 aa26.1■■□□□ 1.77
RER1-202ENST00000378512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.09■■□□□ 1.771e-6■□□□□ 9.9
RER1-202ENST00000378512 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
RER1-202ENST00000378512 ANKLE2Q86XL3 938 aa26.08■■□□□ 1.77
RER1-202ENST00000378512 NPHP4O75161 1426 aaPredicted RBP26.04■■□□□ 1.76
RER1-202ENST00000378512 UNC13BO14795 1591 aa26.04■■□□□ 1.76
RER1-202ENST00000378512 UBAP1LF5GYI3 381 aa26.04■■□□□ 1.76
RER1-202ENST00000378512 MED14O60244 1454 aa26.03■■□□□ 1.76
RER1-202ENST00000378512 UBR1Q8IWV7 1749 aa26.03■■□□□ 1.76
RER1-202ENST00000378512 KANK1Q14678 1352 aa26.02■■□□□ 1.76
RER1-202ENST00000378512 IQGAP1P46940 1657 aa26■■□□□ 1.75
RER1-202ENST00000378512 EFCAB6Q5THR3 1501 aa25.99■■□□□ 1.75
RER1-202ENST00000378512 CPS1P31327 1500 aa25.97■■□□□ 1.75
RER1-202ENST00000378512 TET3O43151 1660 aa25.95■■□□□ 1.74
RER1-202ENST00000378512 PIK3C2BO00750 1634 aa25.95■■□□□ 1.74
RER1-202ENST00000378512 STRCP1A6NGW2 1772 aa25.95■■□□□ 1.74
RER1-202ENST00000378512 DISP3Q9P2K9 1392 aa25.94■■□□□ 1.74
RER1-202ENST00000378512 GCC2Q8IWJ2 1684 aa25.94■■□□□ 1.74
RER1-202ENST00000378512 LTKP29376 864 aa25.93■■□□□ 1.74
RER1-202ENST00000378512 IQGAP3Q86VI3 1631 aa25.93■■□□□ 1.74
RER1-202ENST00000378512 ARHGAP23Q9P227 1491 aa25.92■■□□□ 1.74
RER1-202ENST00000378512 ITGAEP38570 1179 aa25.91■■□□□ 1.74
RER1-202ENST00000378512 RPRD2Q5VT52 1461 aaKnown RBP25.91■■□□□ 1.74
RER1-202ENST00000378512 SCAF11Q99590 1463 aaKnown RBP25.91■■□□□ 1.74
RER1-202ENST00000378512 SYNMO15061 1565 aa25.91■■□□□ 1.74
RER1-202ENST00000378512 NOS1P29475 1434 aa25.9■■□□□ 1.74
RER1-202ENST00000378512 SLIT1O75093 1534 aa25.9■■□□□ 1.74
RER1-202ENST00000378512 KDM5AP29375 1690 aaKnown RBP25.89■■□□□ 1.73
RER1-202ENST00000378512 PIP4K2BP78356 416 aa25.88■■□□□ 1.73
RER1-202ENST00000378512 ILDR2Q71H61 639 aa25.87■■□□□ 1.73
RER1-202ENST00000378512 TXNDC2Q86VQ3 553 aa25.87■■□□□ 1.73
RER1-202ENST00000378512 ALKQ9UM73 1620 aa25.86■■□□□ 1.73
RER1-202ENST00000378512 NAIPQ13075 1403 aa25.86■■□□□ 1.73
RER1-202ENST00000378512 IDI1Q13907 227 aa25.86■■□□□ 1.73
RER1-202ENST00000378512 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
RER1-202ENST00000378512 E9PCH4 1651 aa25.85■■□□□ 1.73
RER1-202ENST00000378512 LRRC7Q96NW7 1537 aa25.84■■□□□ 1.73
RER1-202ENST00000378512 TMEM2Q9UHN6 1383 aa25.83■■□□□ 1.73
RER1-202ENST00000378512 HFM1A2PYH4 1435 aa25.82■■□□□ 1.72
RER1-202ENST00000378512 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
RER1-202ENST00000378512 HSPA1LP34931 641 aa25.8■■□□□ 1.72
RER1-202ENST00000378512 TOM1O60784 492 aa25.79■■□□□ 1.72
RER1-202ENST00000378512 NUP155O75694 1391 aa25.78■■□□□ 1.72
RER1-202ENST00000378512 EID1Q9Y6B2 187 aa25.78■■□□□ 1.72
RER1-202ENST00000378512 ADGRB3O60242 1522 aa25.77■■□□□ 1.72
RER1-202ENST00000378512 SLC52A1Q9NWF4 448 aa25.73■■□□□ 1.71
RER1-202ENST00000378512 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms